RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 THRBP10828 461 aa3.58□□□□□ -1.84
PTCD3-211ENST00000476215 DPP4P27487 766 aa3.58□□□□□ -1.84
PTCD3-211ENST00000476215 PTGFRP43088 359 aa3.58□□□□□ -1.84
PTCD3-211ENST00000476215 GNPDA1P46926 289 aa3.58□□□□□ -1.84
PTCD3-211ENST00000476215 NOVA1P51513 510 aaKnown RBP3.58□□□□□ -1.84
PTCD3-211ENST00000476215 P2RY4P51582 365 aa3.58□□□□□ -1.84
PTCD3-211ENST00000476215 NAPAP54920 295 aa3.58□□□□□ -1.84
PTCD3-211ENST00000476215 NDPQ00604 133 aa3.58□□□□□ -1.84
PTCD3-211ENST00000476215 DPYSQ14117 519 aa3.58□□□□□ -1.84
PTCD3-211ENST00000476215 KCNJ11Q14654 390 aa3.58□□□□□ -1.84
PTCD3-211ENST00000476215 TRIP10Q15642 601 aa3.58□□□□□ -1.84
PTCD3-211ENST00000476215 INAQ16352 499 aa3.58□□□□□ -1.84
PTCD3-211ENST00000476215 TEX44Q53QW1 395 aa3.58□□□□□ -1.84
PTCD3-211ENST00000476215 TMEM184AQ6ZMB5 413 aa3.58□□□□□ -1.84
PTCD3-211ENST00000476215 STAC2Q6ZMT1 411 aa3.58□□□□□ -1.84
PTCD3-211ENST00000476215 LRRC70Q7Z2Q7 622 aa3.58□□□□□ -1.84
PTCD3-211ENST00000476215 HSD11B1LQ7Z5J1 315 aa3.58□□□□□ -1.84
PTCD3-211ENST00000476215 ZNF677Q86XU0 584 aa3.58□□□□□ -1.84
PTCD3-211ENST00000476215 DHTKD1Q96HY7 919 aaPredicted RBP3.58□□□□□ -1.84
PTCD3-211ENST00000476215 HPDLQ96IR7 371 aa3.58□□□□□ -1.84
PTCD3-211ENST00000476215 TMEM121Q9BTD3 319 aa3.58□□□□□ -1.84
PTCD3-211ENST00000476215 FICDQ9BVA6 458 aa3.58□□□□□ -1.84
PTCD3-211ENST00000476215 RWDD1Q9H446 243 aaPredicted RBP3.58□□□□□ -1.84
PTCD3-211ENST00000476215 ECT2Q9H8V3 914 aa3.58□□□□□ -1.84
PTCD3-211ENST00000476215 RDH8Q9NYR8 311 aa3.58□□□□□ -1.84
PTCD3-211ENST00000476215 APOBEC3BQ9UH17 382 aaKnown RBP3.58□□□□□ -1.84
PTCD3-211ENST00000476215 L3MBTL1Q9Y468 752 aa3.58□□□□□ -1.84
PTCD3-211ENST00000476215 GMPPBQ9Y5P6 360 aa3.58□□□□□ -1.84
PTCD3-211ENST00000476215 AP4B1Q9Y6B7 739 aa3.58□□□□□ -1.84
PTCD3-211ENST00000476215 ADAMTS13Q76LX8 1427 aa3.58□□□□□ -1.84
PTCD3-211ENST00000476215 KDM5AP29375 1690 aaKnown RBP3.58□□□□□ -1.84
PTCD3-211ENST00000476215 TMEM131LA2VDJ0 1609 aa3.57□□□□□ -1.84
PTCD3-211ENST00000476215 FAM74A7A6NL05 159 aa3.57□□□□□ -1.84
PTCD3-211ENST00000476215 A8MU10 97 aa3.57□□□□□ -1.84
PTCD3-211ENST00000476215 LATO43561 262 aa3.57□□□□□ -1.84
PTCD3-211ENST00000476215 ADGRB3O60242 1522 aa3.57□□□□□ -1.84
PTCD3-211ENST00000476215 TRIM3O75382 744 aaPredicted RBP3.57□□□□□ -1.84
PTCD3-211ENST00000476215 STX11O75558 287 aa3.57□□□□□ -1.84
PTCD3-211ENST00000476215 TRIM16O95361 564 aa3.57□□□□□ -1.84
PTCD3-211ENST00000476215 CCDC166P0CW27 439 aa3.57□□□□□ -1.84
PTCD3-211ENST00000476215 BCKDHAP12694 445 aa3.57□□□□□ -1.84
PTCD3-211ENST00000476215 XRCC1P18887 633 aaPredicted RBP3.57□□□□□ -1.84
PTCD3-211ENST00000476215 ADRA1AP35348 466 aa3.57□□□□□ -1.84
PTCD3-211ENST00000476215 NAIPQ13075 1403 aa3.57□□□□□ -1.84
PTCD3-211ENST00000476215 FAM74A3Q4VXF1 159 aa3.57□□□□□ -1.84
PTCD3-211ENST00000476215 CCDC92Q53HC0 331 aaPredicted RBP3.57□□□□□ -1.84
PTCD3-211ENST00000476215 DCST2Q5T1A1 773 aa3.57□□□□□ -1.84
PTCD3-211ENST00000476215 C12orf60Q5U649 245 aa3.57□□□□□ -1.84
PTCD3-211ENST00000476215 ARSKQ6UWY0 536 aa3.57□□□□□ -1.84
PTCD3-211ENST00000476215 CYS1Q717R9 158 aa3.57□□□□□ -1.84
PTCD3-211ENST00000476215 CATSPER4Q7RTX7 472 aa3.57□□□□□ -1.84
PTCD3-211ENST00000476215 CBWD2Q8IUF1 395 aa3.57□□□□□ -1.84
PTCD3-211ENST00000476215 ZSCAN4Q8NAM6 433 aaPredicted RBP3.57□□□□□ -1.84
PTCD3-211ENST00000476215 C18orf25Q96B23 403 aaPredicted RBP3.57□□□□□ -1.84
PTCD3-211ENST00000476215 TMEM80Q96HE8 168 aa3.57□□□□□ -1.84
PTCD3-211ENST00000476215 VPS39Q96JC1 886 aa3.57□□□□□ -1.84
PTCD3-211ENST00000476215 VPS35Q96QK1 796 aa3.57□□□□□ -1.84
PTCD3-211ENST00000476215 POLR3FQ9H1D9 316 aaPredicted RBP3.57□□□□□ -1.84
PTCD3-211ENST00000476215 JCADQ9P266 1359 aa3.57□□□□□ -1.84
PTCD3-211ENST00000476215 RRBP1Q9P2E9 1410 aaKnown RBP3.57□□□□□ -1.84
PTCD3-211ENST00000476215 MED1Q15648 1581 aaPredicted RBP3.56□□□□□ -1.84
PTCD3-211ENST00000476215 NKTRP30414 1462 aaKnown RBP3.56□□□□□ -1.84
PTCD3-211ENST00000476215 F8WDY8 70 aa3.56□□□□□ -1.84
PTCD3-211ENST00000476215 LANCL1O43813 399 aa3.56□□□□□ -1.84
PTCD3-211ENST00000476215 ANP32DO95626 131 aa3.56□□□□□ -1.84
PTCD3-211ENST00000476215 CD55P08174 381 aa3.56□□□□□ -1.84
PTCD3-211ENST00000476215 RGRP47804 291 aa3.56□□□□□ -1.84
PTCD3-211ENST00000476215 BPIFB3P59826 476 aa3.56□□□□□ -1.84
PTCD3-211ENST00000476215 LYZP61626 148 aa3.56□□□□□ -1.84
PTCD3-211ENST00000476215 RPL32P62910 135 aaKnown RBP3.56□□□□□ -1.84
PTCD3-211ENST00000476215 RPL8P62917 257 aaKnown RBP3.56□□□□□ -1.84
PTCD3-211ENST00000476215 ZNF154Q13106 437 aa3.56□□□□□ -1.84
PTCD3-211ENST00000476215 PDZK1IP1Q13113 114 aa3.56□□□□□ -1.84
PTCD3-211ENST00000476215 ISXQ2M1V0 245 aa3.56□□□□□ -1.84
PTCD3-211ENST00000476215 ZNF311Q5JNZ3 666 aa3.56□□□□□ -1.84
PTCD3-211ENST00000476215 C9orf129Q5T035 196 aaKnown RBP3.56□□□□□ -1.84
PTCD3-211ENST00000476215 OR8G2PQ6IF36 304 aa3.56□□□□□ -1.84
PTCD3-211ENST00000476215 LANCL3Q6ZV70 420 aa3.56□□□□□ -1.84
PTCD3-211ENST00000476215 LHFPL4Q7Z7J7 247 aa3.56□□□□□ -1.84
PTCD3-211ENST00000476215 GCNT2Q8N0V5 402 aa3.56□□□□□ -1.84
PTCD3-211ENST00000476215 GPATCH11Q8N954 259 aa3.56□□□□□ -1.84
PTCD3-211ENST00000476215 SLC25A38Q96DW6 304 aa3.56□□□□□ -1.84
PTCD3-211ENST00000476215 SDSLQ96GA7 329 aa3.56□□□□□ -1.84
PTCD3-211ENST00000476215 FEM1AQ9BSK4 669 aa3.56□□□□□ -1.84
PTCD3-211ENST00000476215 C19orf24Q9BVV8 132 aa3.56□□□□□ -1.84
PTCD3-211ENST00000476215 GSDMCQ9BYG8 508 aa3.56□□□□□ -1.84
PTCD3-211ENST00000476215 CCSER1Q9C0I3 900 aa3.56□□□□□ -1.84
PTCD3-211ENST00000476215 AGPAT5Q9NUQ2 364 aa3.56□□□□□ -1.84
PTCD3-211ENST00000476215 ANKMY1Q9P2S6 941 aa3.56□□□□□ -1.84
PTCD3-211ENST00000476215 CRLS1Q9UJA2 301 aa3.56□□□□□ -1.84
PTCD3-211ENST00000476215 CHMP2BQ9UQN3 213 aa3.56□□□□□ -1.84
PTCD3-211ENST00000476215 RNF6Q9Y252 685 aa3.56□□□□□ -1.84
PTCD3-211ENST00000476215 XIRP1Q702N8 1843 aaKnown RBP3.56□□□□□ -1.84
PTCD3-211ENST00000476215 UNC13BO14795 1591 aa3.55□□□□□ -1.84
PTCD3-211ENST00000476215 SRCAPQ6ZRS2 3230 aa3.55□□□□□ -1.84
PTCD3-211ENST00000476215 CDX4O14627 284 aaPredicted RBP3.55□□□□□ -1.84
PTCD3-211ENST00000476215 CHADO15335 359 aa3.55□□□□□ -1.84
PTCD3-211ENST00000476215 ZNF254O75437 659 aa3.55□□□□□ -1.84
PTCD3-211ENST00000476215 OR4F21O95013 312 aa3.55□□□□□ -1.84
PTCD3-211ENST00000476215 CYP2F1P24903 491 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms