RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 HSD3B2P26439 372 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 MST1P26927 711 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 SHC1P29353 583 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 PLXNA3P51805 1871 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 NR0B1P51843 470 aaKnown RBP9.88□□□□□ -0.83
ABCF1-205ENST00000475993 CCL23P55773 120 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 OR10A3P58181 314 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 PITPNAQ00169 270 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 DOC2AQ14183 400 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 ZNF791Q3KP31 576 aaPredicted RBP9.88□□□□□ -0.83
ABCF1-205ENST00000475993 HIST3H2AQ7L7L0 130 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 TECPR1Q7Z6L1 1165 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 RBM45Q8IUH3 476 aaKnown RBP9.88□□□□□ -0.83
ABCF1-205ENST00000475993 CFAP52Q8N1V2 620 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 KLHDC9Q8NEP7 349 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 OR4F15Q8NGB8 312 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 OR4D11Q8NGI4 311 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 RXFP4Q8TDU9 374 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 HIST1H2ACQ93077 130 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 CPNE4Q96A23 557 aaPredicted RBP9.88□□□□□ -0.83
ABCF1-205ENST00000475993 RGMAQ96B86 450 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 TSNAXQ99598 290 aaKnown RBP9.88□□□□□ -0.83
ABCF1-205ENST00000475993 SPON2Q9BUD6 331 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 IFT27Q9BW83 186 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 PLA2G12AQ9BZM1 189 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 LRRN3Q9H3W5 708 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 ST3GAL5Q9UNP4 418 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 GSAPA4D1B5 854 aa9.87□□□□□ -0.83
ABCF1-205ENST00000475993 WASH3PC4AMC7 463 aa9.87□□□□□ -0.83
ABCF1-205ENST00000475993 CACNB4O00305 520 aaPredicted RBP9.87□□□□□ -0.83
ABCF1-205ENST00000475993 MID1O15344 667 aa9.87□□□□□ -0.83
ABCF1-205ENST00000475993 OIP5O43482 229 aa9.87□□□□□ -0.83
ABCF1-205ENST00000475993 GATBO75879 557 aaKnown RBP9.87□□□□□ -0.83
ABCF1-205ENST00000475993 AQP8O94778 261 aa9.87□□□□□ -0.83
ABCF1-205ENST00000475993 IGHA1P01876 353 aa9.87□□□□□ -0.83
ABCF1-205ENST00000475993 IFNGR1P15260 489 aa9.87□□□□□ -0.83
ABCF1-205ENST00000475993 PDHA2P29803 388 aa9.87□□□□□ -0.83
ABCF1-205ENST00000475993 MAPK9P45984 424 aa9.87□□□□□ -0.83
ABCF1-205ENST00000475993 BDH1Q02338 343 aa9.87□□□□□ -0.83
ABCF1-205ENST00000475993 IRF8Q02556 426 aa9.87□□□□□ -0.83
ABCF1-205ENST00000475993 TLE2Q04725 743 aa9.87□□□□□ -0.83
ABCF1-205ENST00000475993 RPS26P11Q5JNZ5 115 aaPredicted RBP9.87□□□□□ -0.83
ABCF1-205ENST00000475993 ENTPD8Q5MY95 495 aa9.87□□□□□ -0.83
ABCF1-205ENST00000475993 CXorf57Q6NSI4 855 aaKnown RBP9.87□□□□□ -0.83
ABCF1-205ENST00000475993 PODNL1Q6PEZ8 512 aa9.87□□□□□ -0.83
ABCF1-205ENST00000475993 ZNF322Q6U7Q0 402 aaPredicted RBP9.87□□□□□ -0.83
ABCF1-205ENST00000475993 DNAJB7Q7Z6W7 309 aaPredicted RBP9.87□□□□□ -0.83
ABCF1-205ENST00000475993 NUDT13Q86X67 352 aa9.87□□□□□ -0.83
ABCF1-205ENST00000475993 TGIF2LXQ8IUE1 241 aa9.87□□□□□ -0.83
ABCF1-205ENST00000475993 SCN4BQ8IWT1 228 aa9.87□□□□□ -0.83
ABCF1-205ENST00000475993 CHST14Q8NCH0 376 aa9.87□□□□□ -0.83
ABCF1-205ENST00000475993 BPIFCQ8NFQ6 507 aa9.87□□□□□ -0.83
ABCF1-205ENST00000475993 STK35Q8TDR2 534 aa9.87□□□□□ -0.83
ABCF1-205ENST00000475993 WDR89Q96FK6 387 aaPredicted RBP9.87□□□□□ -0.83
ABCF1-205ENST00000475993 WFDC6Q9BQY6 131 aa9.87□□□□□ -0.83
ABCF1-205ENST00000475993 GSDMCQ9BYG8 508 aa9.87□□□□□ -0.83
ABCF1-205ENST00000475993 SMG9Q9H0W8 520 aaKnown RBP9.87□□□□□ -0.83
ABCF1-205ENST00000475993 SLC25A32Q9H2D1 315 aa9.87□□□□□ -0.83
ABCF1-205ENST00000475993 REEP4Q9H6H4 257 aa9.87□□□□□ -0.83
ABCF1-205ENST00000475993 BRF2Q9HAW0 419 aa9.87□□□□□ -0.83
ABCF1-205ENST00000475993 CKAP5Q14008 2032 aa9.87□□□□□ -0.83
ABCF1-205ENST00000475993 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.87□□□□□ -0.83
ABCF1-205ENST00000475993 NEDD8-MDP1E9PL57 170 aa9.87□□□□□ -0.83
ABCF1-205ENST00000475993 ZNF197O14709 1029 aa9.87□□□□□ -0.83
ABCF1-205ENST00000475993 ARPC5O15511 151 aa9.87□□□□□ -0.83
ABCF1-205ENST00000475993 GPR37L1O60883 481 aa9.87□□□□□ -0.83
ABCF1-205ENST00000475993 LILRB5O75023 590 aa9.87□□□□□ -0.83
ABCF1-205ENST00000475993 ICOSLGO75144 302 aa9.87□□□□□ -0.83
ABCF1-205ENST00000475993 ITGA10O75578 1167 aa9.87□□□□□ -0.83
ABCF1-205ENST00000475993 PAK4O96013 591 aaPredicted RBP9.87□□□□□ -0.83
ABCF1-205ENST00000475993 PSMB1P20618 241 aaKnown RBP9.87□□□□□ -0.83
ABCF1-205ENST00000475993 TACR2P21452 398 aa9.87□□□□□ -0.83
ABCF1-205ENST00000475993 TIA1P31483 386 aaKnown RBP eCLIP9.87□□□□□ -0.83
ABCF1-205ENST00000475993 PFN3P60673 137 aa9.87□□□□□ -0.83
ABCF1-205ENST00000475993 RAC1P63000 192 aa9.87□□□□□ -0.83
ABCF1-205ENST00000475993 FAM69AQ5T7M9 428 aa9.87□□□□□ -0.83
ABCF1-205ENST00000475993 SPRYD7Q5W111 196 aa9.87□□□□□ -0.83
ABCF1-205ENST00000475993 GLDNQ6ZMI3 551 aaPredicted RBP9.87□□□□□ -0.83
ABCF1-205ENST00000475993 TSPAN33Q86UF1 283 aa9.87□□□□□ -0.83
ABCF1-205ENST00000475993 KLBQ86Z14 1044 aa9.87□□□□□ -0.83
ABCF1-205ENST00000475993 ARRDC1Q8N5I2 433 aa9.87□□□□□ -0.83
ABCF1-205ENST00000475993 PXT1Q8NFP0 134 aa9.87□□□□□ -0.83
ABCF1-205ENST00000475993 MRPS31Q92665 395 aaKnown RBP9.87□□□□□ -0.83
ABCF1-205ENST00000475993 ZNF707Q96C28 371 aaPredicted RBP9.87□□□□□ -0.83
ABCF1-205ENST00000475993 ORAI1Q96D31 301 aa9.87□□□□□ -0.83
ABCF1-205ENST00000475993 ZFP3Q96NJ6 502 aa9.87□□□□□ -0.83
ABCF1-205ENST00000475993 ARL6Q9H0F7 186 aa9.87□□□□□ -0.83
ABCF1-205ENST00000475993 RBPJLQ9UBG7 517 aa9.87□□□□□ -0.83
ABCF1-205ENST00000475993 EXOGQ9Y2C4 368 aaKnown RBP9.87□□□□□ -0.83
ABCF1-205ENST00000475993 GNG14A0A1W2PPG7 69 aa9.86□□□□□ -0.83
ABCF1-205ENST00000475993 PRR23D1E9PI22 279 aaPredicted RBP9.86□□□□□ -0.83
ABCF1-205ENST00000475993 C8GP07360 202 aa9.86□□□□□ -0.83
ABCF1-205ENST00000475993 PRR23D2P0DMB1 279 aaPredicted RBP9.86□□□□□ -0.83
ABCF1-205ENST00000475993 SMIM10L2AP0DMW4 78 aa9.86□□□□□ -0.83
ABCF1-205ENST00000475993 SMIM10L2BP0DMW5 78 aa9.86□□□□□ -0.83
ABCF1-205ENST00000475993 TMEM11P17152 192 aa9.86□□□□□ -0.83
ABCF1-205ENST00000475993 PSMA6P60900 246 aaKnown RBP9.86□□□□□ -0.83
ABCF1-205ENST00000475993 CAP1Q01518 475 aa9.86□□□□□ -0.83
ABCF1-205ENST00000475993 ECH1Q13011 328 aa9.86□□□□□ -0.83
ABCF1-205ENST00000475993 SKP2Q13309 424 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms