RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 NEUROG1Q92886 237 aa9.3□□□□□ -0.92
CALD1-217ENST00000475772 GMPPAQ96IJ6 420 aaPredicted RBP9.3□□□□□ -0.92
CALD1-217ENST00000475772 EGLN2Q96KS0 407 aa9.3□□□□□ -0.92
CALD1-217ENST00000475772 AMDHD1Q96NU7 426 aa9.3□□□□□ -0.92
CALD1-217ENST00000475772 GSTO2Q9H4Y5 243 aa9.3□□□□□ -0.92
CALD1-217ENST00000475772 TNFRSF12AQ9NP84 129 aa9.3□□□□□ -0.92
CALD1-217ENST00000475772 GIMAP4Q9NUV9 329 aa9.3□□□□□ -0.92
CALD1-217ENST00000475772 FBXO34Q9NWN3 711 aa9.3□□□□□ -0.92
CALD1-217ENST00000475772 GRID1Q9ULK0 1009 aa9.3□□□□□ -0.92
CALD1-217ENST00000475772 LAMP3Q9UQV4 416 aa9.3□□□□□ -0.92
CALD1-217ENST00000475772 VDAC3Q9Y277 283 aa9.3□□□□□ -0.92
CALD1-217ENST00000475772 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.29□□□□□ -0.92
CALD1-217ENST00000475772 ALG1L2C9J202 215 aa9.29□□□□□ -0.92
CALD1-217ENST00000475772 CXCL13O43927 109 aa9.29□□□□□ -0.92
CALD1-217ENST00000475772 TMCC2O75069 709 aa9.29□□□□□ -0.92
CALD1-217ENST00000475772 GCM2O75603 506 aaPredicted RBP9.29□□□□□ -0.92
CALD1-217ENST00000475772 NKX2-2O95096 273 aa9.29□□□□□ -0.92
CALD1-217ENST00000475772 SNRPAP09012 282 aaKnown RBP9.29□□□□□ -0.92
CALD1-217ENST00000475772 PSMB1P20618 241 aaKnown RBP9.29□□□□□ -0.92
CALD1-217ENST00000475772 SHC1P29353 583 aa9.29□□□□□ -0.92
CALD1-217ENST00000475772 RFX3P48380 749 aa9.29□□□□□ -0.92
CALD1-217ENST00000475772 PRKAA2P54646 552 aa9.29□□□□□ -0.92
CALD1-217ENST00000475772 ETF1P62495 437 aaKnown RBP9.29□□□□□ -0.92
CALD1-217ENST00000475772 ZNF763Q0D2J5 394 aa9.29□□□□□ -0.92
CALD1-217ENST00000475772 TSC22D1Q15714 1073 aa9.29□□□□□ -0.92
CALD1-217ENST00000475772 CLEC12BQ2HXU8 276 aa9.29□□□□□ -0.92
CALD1-217ENST00000475772 ZBTB37Q5TC79 503 aa9.29□□□□□ -0.92
CALD1-217ENST00000475772 HEPHL1Q6MZM0 1159 aa9.29□□□□□ -0.92
CALD1-217ENST00000475772 ADAM5Q6NVV9 412 aa9.29□□□□□ -0.92
CALD1-217ENST00000475772 DNM1P46Q6ZS02 220 aa9.29□□□□□ -0.92
CALD1-217ENST00000475772 ZNF551Q7Z340 670 aaPredicted RBP9.29□□□□□ -0.92
CALD1-217ENST00000475772 GALNT10Q86SR1 603 aa9.29□□□□□ -0.92
CALD1-217ENST00000475772 SLC9A6Q92581 669 aa9.29□□□□□ -0.92
CALD1-217ENST00000475772 GFM2Q969S9 779 aaKnown RBP9.29□□□□□ -0.92
CALD1-217ENST00000475772 ZNF524Q96C55 264 aa9.29□□□□□ -0.92
CALD1-217ENST00000475772 L3HYPDHQ96EM0 354 aa9.29□□□□□ -0.92
CALD1-217ENST00000475772 GIMAP5Q96F15 307 aa9.29□□□□□ -0.92
CALD1-217ENST00000475772 RHOVQ96L33 236 aa9.29□□□□□ -0.92
CALD1-217ENST00000475772 ACTR6Q9GZN1 396 aa9.29□□□□□ -0.92
CALD1-217ENST00000475772 OR10A4Q9H209 315 aa9.29□□□□□ -0.92
CALD1-217ENST00000475772 Q9N2J8 555 aa9.29□□□□□ -0.92
CALD1-217ENST00000475772 SENP1Q9P0U3 644 aa9.29□□□□□ -0.92
CALD1-217ENST00000475772 GPR52Q9Y2T5 361 aa9.29□□□□□ -0.92
CALD1-217ENST00000475772 EMC9Q9Y3B6 208 aa9.29□□□□□ -0.92
CALD1-217ENST00000475772 CCL27Q9Y4X3 112 aa9.29□□□□□ -0.92
CALD1-217ENST00000475772 POLR3HQ9Y535 204 aaPredicted RBP9.29□□□□□ -0.92
CALD1-217ENST00000475772 MALRD1Q5VYJ5 2156 aa9.29□□□□□ -0.92
CALD1-217ENST00000475772 LOC100996750A0A140TA64 210 aa9.28□□□□□ -0.92
CALD1-217ENST00000475772 A0A1W2PRB8 838 aa9.28□□□□□ -0.92
CALD1-217ENST00000475772 NPIPB8E9PQR5 432 aa9.28□□□□□ -0.92
CALD1-217ENST00000475772 TNFSF11O14788 317 aa9.28□□□□□ -0.92
CALD1-217ENST00000475772 NDUFS7O75251 213 aa9.28□□□□□ -0.92
CALD1-217ENST00000475772 SLITRK5O94991 958 aa9.28□□□□□ -0.92
CALD1-217ENST00000475772 OXSR1O95747 527 aaPredicted RBP9.28□□□□□ -0.92
CALD1-217ENST00000475772 CD8AP01732 235 aa9.28□□□□□ -0.92
CALD1-217ENST00000475772 ENO1P06733 434 aaKnown RBP9.28□□□□□ -0.92
CALD1-217ENST00000475772 ACP2P11117 423 aa9.28□□□□□ -0.92
CALD1-217ENST00000475772 ATP5F1P24539 256 aaPredicted RBP9.28□□□□□ -0.92
CALD1-217ENST00000475772 GSTM5P46439 218 aa9.28□□□□□ -0.92
CALD1-217ENST00000475772 CLK3P49761 638 aaKnown RBP9.28□□□□□ -0.92
CALD1-217ENST00000475772 PKNOX1P55347 436 aa9.28□□□□□ -0.92
CALD1-217ENST00000475772 PLPPR5Q32ZL2 321 aa9.28□□□□□ -0.92
CALD1-217ENST00000475772 ZNF385BQ569K4 471 aa9.28□□□□□ -0.92
CALD1-217ENST00000475772 NCMAPQ5T1S8 102 aa9.28□□□□□ -0.92
CALD1-217ENST00000475772 CPTPQ5TA50 214 aa9.28□□□□□ -0.92
CALD1-217ENST00000475772 C8orf74Q6P047 294 aa9.28□□□□□ -0.92
CALD1-217ENST00000475772 HDXQ7Z353 690 aa9.28□□□□□ -0.92
CALD1-217ENST00000475772 NUFIP2Q7Z417 695 aaKnown RBP9.28□□□□□ -0.92
CALD1-217ENST00000475772 GABRG1Q8N1C3 465 aa9.28□□□□□ -0.92
CALD1-217ENST00000475772 Q8N3U1 123 aa9.28□□□□□ -0.92
CALD1-217ENST00000475772 GTPBP8Q8N3Z3 284 aaPredicted RBP9.28□□□□□ -0.92
CALD1-217ENST00000475772 GATSQ8NAP1 163 aa9.28□□□□□ -0.92
CALD1-217ENST00000475772 ROBO4Q8WZ75 1007 aa9.28□□□□□ -0.92
CALD1-217ENST00000475772 OSTF1Q92882 214 aa9.28□□□□□ -0.92
CALD1-217ENST00000475772 KRTAP4-6Q9BYQ5 205 aa9.28□□□□□ -0.92
CALD1-217ENST00000475772 REG4Q9BYZ8 158 aa9.28□□□□□ -0.92
CALD1-217ENST00000475772 PRRG4Q9BZD6 226 aa9.28□□□□□ -0.92
CALD1-217ENST00000475772 SHCBP1LQ9BZQ2 653 aa9.28□□□□□ -0.92
CALD1-217ENST00000475772 CXorf56Q9H5V9 222 aa9.28□□□□□ -0.92
CALD1-217ENST00000475772 MYNNQ9NPC7 610 aa9.28□□□□□ -0.92
CALD1-217ENST00000475772 MED17Q9NVC6 651 aa9.28□□□□□ -0.92
CALD1-217ENST00000475772 DDX18Q9NVP1 670 aaKnown RBP9.28□□□□□ -0.92
CALD1-217ENST00000475772 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.28□□□□□ -0.92
CALD1-217ENST00000475772 DPRXA6NFQ7 191 aa9.27□□□□□ -0.93
CALD1-217ENST00000475772 ZNF814B7Z6K7 855 aa9.27□□□□□ -0.93
CALD1-217ENST00000475772 G3V2L1 256 aa9.27□□□□□ -0.93
CALD1-217ENST00000475772 IFI6P09912 130 aa9.27□□□□□ -0.93
CALD1-217ENST00000475772 LINGO3P0C6S8 592 aa9.27□□□□□ -0.93
CALD1-217ENST00000475772 PRPS2P11908 318 aa9.27□□□□□ -0.93
CALD1-217ENST00000475772 FCGR2AP12318 317 aa9.27□□□□□ -0.93
CALD1-217ENST00000475772 ZNF17P17021 662 aa9.27□□□□□ -0.93
CALD1-217ENST00000475772 TAC1P20366 129 aa9.27□□□□□ -0.93
CALD1-217ENST00000475772 AGTR1P30556 359 aa9.27□□□□□ -0.93
CALD1-217ENST00000475772 CDKN1AP38936 164 aa9.27□□□□□ -0.93
CALD1-217ENST00000475772 PSMD4P55036 377 aaKnown RBP9.27□□□□□ -0.93
CALD1-217ENST00000475772 CTBP2P56545 445 aa9.27□□□□□ -0.93
CALD1-217ENST00000475772 SLC18A2Q05940 514 aa9.27□□□□□ -0.93
CALD1-217ENST00000475772 LCP2Q13094 533 aa9.27□□□□□ -0.93
CALD1-217ENST00000475772 CDK5R2Q13319 367 aa9.27□□□□□ -0.93
CALD1-217ENST00000475772 SLC29A2Q14542 456 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms