RNA–Protein interactions for RNA: ENST00000475506.1

SDHB-205, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-205ENST00000475506 ALDH3B2P48448 385 aa4.36□□□□□ -1.71
SDHB-205ENST00000475506 FNTAP49354 379 aa4.36□□□□□ -1.71
SDHB-205ENST00000475506 OTUD4Q01804 1114 aaKnown RBP4.36□□□□□ -1.71
SDHB-205ENST00000475506 RIPPLY1Q0D2K3 151 aa4.36□□□□□ -1.71
SDHB-205ENST00000475506 CUL1Q13616 776 aa4.36□□□□□ -1.71
SDHB-205ENST00000475506 MESDQ14696 234 aa4.36□□□□□ -1.71
SDHB-205ENST00000475506 ZNF506Q5JVG8 444 aa4.36□□□□□ -1.71
SDHB-205ENST00000475506 OR8G2PQ6IF36 304 aa4.36□□□□□ -1.71
SDHB-205ENST00000475506 FAHD2BQ6P2I3 314 aaPredicted RBP4.36□□□□□ -1.71
SDHB-205ENST00000475506 DOK6Q6PKX4 331 aa4.36□□□□□ -1.71
SDHB-205ENST00000475506 TRPM8Q7Z2W7 1104 aa4.36□□□□□ -1.71
SDHB-205ENST00000475506 TIPARPQ7Z3E1 657 aaKnown RBP4.36□□□□□ -1.71
SDHB-205ENST00000475506 FAM228AQ86W67 206 aa4.36□□□□□ -1.71
SDHB-205ENST00000475506 ABHD12Q8N2K0 398 aa4.36□□□□□ -1.71
SDHB-205ENST00000475506 Q8N377 158 aa4.36□□□□□ -1.71
SDHB-205ENST00000475506 KIR3DL3Q8N743 410 aa4.36□□□□□ -1.71
SDHB-205ENST00000475506 OR10A7Q8NGE5 316 aa4.36□□□□□ -1.71
SDHB-205ENST00000475506 FAHD2AQ96GK7 314 aa4.36□□□□□ -1.71
SDHB-205ENST00000475506 C9orf85Q96MD7 179 aa4.36□□□□□ -1.71
SDHB-205ENST00000475506 HCAR1Q9BXC0 346 aa4.36□□□□□ -1.71
SDHB-205ENST00000475506 ADNPQ9H2P0 1102 aa4.36□□□□□ -1.71
SDHB-205ENST00000475506 VCPKMTQ9H867 229 aa4.36□□□□□ -1.71
SDHB-205ENST00000475506 MCCC2Q9HCC0 563 aa4.36□□□□□ -1.71
SDHB-205ENST00000475506 POLE4Q9NR33 117 aa4.36□□□□□ -1.71
SDHB-205ENST00000475506 WRAP73Q9P2S5 460 aaPredicted RBP4.36□□□□□ -1.71
SDHB-205ENST00000475506 PRODH2Q9UF12 536 aa4.36□□□□□ -1.71
SDHB-205ENST00000475506 SCML2Q9UQR0 700 aa4.36□□□□□ -1.71
SDHB-205ENST00000475506 PNPLA6Q8IY17 1366 aa4.36□□□□□ -1.71
SDHB-205ENST00000475506 KIF26BQ2KJY2 2108 aa4.36□□□□□ -1.71
SDHB-205ENST00000475506 A0A1B0GTH9 108 aa4.35□□□□□ -1.71
SDHB-205ENST00000475506 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.35□□□□□ -1.71
SDHB-205ENST00000475506 A0A1B0GVL5 298 aa4.35□□□□□ -1.71
SDHB-205ENST00000475506 FAM240BA0A1B0GVZ2 78 aa4.35□□□□□ -1.71
SDHB-205ENST00000475506 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.35□□□□□ -1.71
SDHB-205ENST00000475506 BTBD17A6NE02 478 aa4.35□□□□□ -1.71
SDHB-205ENST00000475506 CCT8L1PA6NM43 557 aa4.35□□□□□ -1.71
SDHB-205ENST00000475506 FCN1O00602 326 aa4.35□□□□□ -1.71
SDHB-205ENST00000475506 LRRTM2O43300 516 aa4.35□□□□□ -1.71
SDHB-205ENST00000475506 TSPAN12O95859 305 aa4.35□□□□□ -1.71
SDHB-205ENST00000475506 RENP00797 406 aa4.35□□□□□ -1.71
SDHB-205ENST00000475506 SNRPCP09234 159 aaKnown RBP4.35□□□□□ -1.71
SDHB-205ENST00000475506 CYP2B6P20813 491 aa4.35□□□□□ -1.71
SDHB-205ENST00000475506 PTBP1P26599 531 aaKnown RBP eCLIP4.35□□□□□ -1.71
SDHB-205ENST00000475506 UGT1A5P35504 534 aa4.35□□□□□ -1.71
SDHB-205ENST00000475506 HLCSP50747 726 aa4.35□□□□□ -1.71
SDHB-205ENST00000475506 EFNB2P52799 333 aa4.35□□□□□ -1.71
SDHB-205ENST00000475506 HSPA2P54652 639 aa4.35□□□□□ -1.71
SDHB-205ENST00000475506 ERVPABLB-1P60509 514 aa4.35□□□□□ -1.71
SDHB-205ENST00000475506 ERVK11-1P61568 191 aa4.35□□□□□ -1.71
SDHB-205ENST00000475506 IRX1P78414 480 aaPredicted RBP4.35□□□□□ -1.71
SDHB-205ENST00000475506 NDUFA9Q16795 377 aa4.35□□□□□ -1.71
SDHB-205ENST00000475506 HSP90AB3PQ58FF7 597 aa4.35□□□□□ -1.71
SDHB-205ENST00000475506 NHLRC3Q5JS37 347 aa4.35□□□□□ -1.71
SDHB-205ENST00000475506 GCNT7Q6ZNI0 430 aa4.35□□□□□ -1.71
SDHB-205ENST00000475506 LRRC49Q8IUZ0 686 aa4.35□□□□□ -1.71
SDHB-205ENST00000475506 BEST4Q8NFU0 473 aa4.35□□□□□ -1.71
SDHB-205ENST00000475506 OR52K2Q8NGK3 314 aa4.35□□□□□ -1.71
SDHB-205ENST00000475506 OR6T1Q8NGN1 323 aa4.35□□□□□ -1.71
SDHB-205ENST00000475506 OR1L4Q8NGR5 311 aa4.35□□□□□ -1.71
SDHB-205ENST00000475506 FAM110BQ8TC76 370 aa4.35□□□□□ -1.71
SDHB-205ENST00000475506 CITED1Q99966 193 aa4.35□□□□□ -1.71
SDHB-205ENST00000475506 LRRC61Q9BV99 259 aa4.35□□□□□ -1.71
SDHB-205ENST00000475506 SPATA16Q9BXB7 569 aa4.35□□□□□ -1.71
SDHB-205ENST00000475506 PARD6BQ9BYG5 372 aa4.35□□□□□ -1.71
SDHB-205ENST00000475506 EXOSC3Q9NQT5 275 aaKnown RBP4.35□□□□□ -1.71
SDHB-205ENST00000475506 EHFQ9NZC4 300 aa4.35□□□□□ -1.71
SDHB-205ENST00000475506 ARMCX1Q9P291 453 aa4.35□□□□□ -1.71
SDHB-205ENST00000475506 SEC14L3Q9UDX4 400 aa4.35□□□□□ -1.71
SDHB-205ENST00000475506 ZNF639Q9UID6 485 aa4.35□□□□□ -1.71
SDHB-205ENST00000475506 IFT52Q9Y366 437 aa4.35□□□□□ -1.71
SDHB-205ENST00000475506 AK6Q9Y3D8 172 aaKnown RBP4.35□□□□□ -1.71
SDHB-205ENST00000475506 L3MBTL1Q9Y468 752 aa4.35□□□□□ -1.71
SDHB-205ENST00000475506 USP6P35125 1406 aa4.35□□□□□ -1.71
SDHB-205ENST00000475506 TDRD15B5MCY1 1934 aaKnown RBP4.34□□□□□ -1.71
SDHB-205ENST00000475506 ZNF840PA6NDX5 716 aa4.34□□□□□ -1.71
SDHB-205ENST00000475506 ZNF487B1APH4 448 aa4.34□□□□□ -1.71
SDHB-205ENST00000475506 SAP18O00422 153 aaKnown RBP4.34□□□□□ -1.71
SDHB-205ENST00000475506 RS1O15537 224 aa4.34□□□□□ -1.71
SDHB-205ENST00000475506 LATO43561 262 aa4.34□□□□□ -1.71
SDHB-205ENST00000475506 SCGNO76038 276 aa4.34□□□□□ -1.71
SDHB-205ENST00000475506 SLC2A3P11169 496 aa4.34□□□□□ -1.71
SDHB-205ENST00000475506 ACADSP16219 412 aa4.34□□□□□ -1.71
SDHB-205ENST00000475506 CCR1P32246 355 aa4.34□□□□□ -1.71
SDHB-205ENST00000475506 CD80P33681 288 aa4.34□□□□□ -1.71
SDHB-205ENST00000475506 ATP5OP48047 213 aa4.34□□□□□ -1.71
SDHB-205ENST00000475506 ARHGDIBP52566 201 aa4.34□□□□□ -1.71
SDHB-205ENST00000475506 SUCLG1P53597 346 aaKnown RBP4.34□□□□□ -1.71
SDHB-205ENST00000475506 ATP1B3P54709 279 aa4.34□□□□□ -1.71
SDHB-205ENST00000475506 ATP5IP56385 69 aaPredicted RBP4.34□□□□□ -1.71
SDHB-205ENST00000475506 RND3P61587 244 aa4.34□□□□□ -1.71
SDHB-205ENST00000475506 PAX8Q06710 450 aa4.34□□□□□ -1.71
SDHB-205ENST00000475506 PUDPQ08623 228 aa4.34□□□□□ -1.71
SDHB-205ENST00000475506 ELAVL2Q12926 359 aaKnown RBP4.34□□□□□ -1.71
SDHB-205ENST00000475506 IMMTQ16891 758 aaKnown RBP4.34□□□□□ -1.71
SDHB-205ENST00000475506 CNPY1Q3B7I2 92 aa4.34□□□□□ -1.71
SDHB-205ENST00000475506 TEX44Q53QW1 395 aa4.34□□□□□ -1.71
SDHB-205ENST00000475506 ZC2HC1BQ5TFG8 222 aa4.34□□□□□ -1.71
SDHB-205ENST00000475506 PRAMEF5Q5TYX0 476 aa4.34□□□□□ -1.71
SDHB-205ENST00000475506 PRAMEF6Q5VXH4 476 aa4.34□□□□□ -1.71
SDHB-205ENST00000475506 OR2A2Q6IF42 318 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms