RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 C16orf62Q7Z3J2 963 aa14.29□□□□□ -0.12
CPSF3-203ENST00000475482 ADGRG5Q8IZF4 528 aa14.29□□□□□ -0.12
CPSF3-203ENST00000475482 PQLC1Q8N2U9 271 aa14.29□□□□□ -0.12
CPSF3-203ENST00000475482 FAM109AQ8N4B1 249 aa14.29□□□□□ -0.12
CPSF3-203ENST00000475482 PAPD5Q8NDF8 572 aaKnown RBP14.29□□□□□ -0.12
CPSF3-203ENST00000475482 BBS10Q8TAM1 723 aa14.29□□□□□ -0.12
CPSF3-203ENST00000475482 CANT1Q8WVQ1 401 aa14.29□□□□□ -0.12
CPSF3-203ENST00000475482 MAL2Q969L2 176 aa14.29□□□□□ -0.12
CPSF3-203ENST00000475482 OR7D2Q96RA2 312 aa14.29□□□□□ -0.12
CPSF3-203ENST00000475482 STACQ99469 402 aa14.29□□□□□ -0.12
CPSF3-203ENST00000475482 DEFB127Q9H1M4 99 aa14.29□□□□□ -0.12
CPSF3-203ENST00000475482 OR10A5Q9H207 317 aa14.29□□□□□ -0.12
CPSF3-203ENST00000475482 CACYBPQ9HB71 228 aaKnown RBP14.29□□□□□ -0.12
CPSF3-203ENST00000475482 TUBA8Q9NY65 449 aaPredicted RBP14.29□□□□□ -0.12
CPSF3-203ENST00000475482 CNIH4Q9P003 139 aa14.29□□□□□ -0.12
CPSF3-203ENST00000475482 PRODH2Q9UF12 536 aa14.29□□□□□ -0.12
CPSF3-203ENST00000475482 CNOT11Q9UKZ1 510 aaKnown RBP14.29□□□□□ -0.12
CPSF3-203ENST00000475482 CFL2Q9Y281 166 aa14.29□□□□□ -0.12
CPSF3-203ENST00000475482 LRBAP50851 2863 aa14.29□□□□□ -0.12
CPSF3-203ENST00000475482 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.28□□□□□ -0.12
CPSF3-203ENST00000475482 C2orf92A0A1B0GVN3 265 aa14.28□□□□□ -0.12
CPSF3-203ENST00000475482 FAM166BA8MTA8 275 aa14.28□□□□□ -0.12
CPSF3-203ENST00000475482 G3V3Y1 287 aa14.28□□□□□ -0.12
CPSF3-203ENST00000475482 ACOT7O00154 380 aa14.28□□□□□ -0.12
CPSF3-203ENST00000475482 ZNF682O95780 498 aa14.28□□□□□ -0.12
CPSF3-203ENST00000475482 C1QCP02747 245 aa14.28□□□□□ -0.12
CPSF3-203ENST00000475482 BCHEP06276 602 aa14.28□□□□□ -0.12
CPSF3-203ENST00000475482 FASP25445 335 aa14.28□□□□□ -0.12
CPSF3-203ENST00000475482 PIGAP37287 484 aa14.28□□□□□ -0.12
CPSF3-203ENST00000475482 PLGLB1Q02325 96 aa14.28□□□□□ -0.12
CPSF3-203ENST00000475482 NCCRP1Q6ZVX7 275 aaPredicted RBP14.28□□□□□ -0.12
CPSF3-203ENST00000475482 FKBP9P1Q75LS8 142 aa14.28□□□□□ -0.12
CPSF3-203ENST00000475482 CBLL1Q75N03 491 aa14.28□□□□□ -0.12
CPSF3-203ENST00000475482 TRILQ7L0X0 811 aa14.28□□□□□ -0.12
CPSF3-203ENST00000475482 CD163Q86VB7 1156 aa14.28□□□□□ -0.12
CPSF3-203ENST00000475482 MARVELD2Q8N4S9 558 aa14.28□□□□□ -0.12
CPSF3-203ENST00000475482 FBXO30Q8TB52 745 aa14.28□□□□□ -0.12
CPSF3-203ENST00000475482 SLC38A5Q8WUX1 472 aa14.28□□□□□ -0.12
CPSF3-203ENST00000475482 GIMAP5Q96F15 307 aa14.28□□□□□ -0.12
CPSF3-203ENST00000475482 SLC47A1Q96FL8 570 aa14.28□□□□□ -0.12
CPSF3-203ENST00000475482 TMEM19Q96HH6 336 aa14.28□□□□□ -0.12
CPSF3-203ENST00000475482 PYURFQ96I23 114 aa14.28□□□□□ -0.12
CPSF3-203ENST00000475482 TRNT1Q96Q11 434 aaKnown RBP14.28□□□□□ -0.12
CPSF3-203ENST00000475482 GAL3ST4Q96RP7 486 aa14.28□□□□□ -0.12
CPSF3-203ENST00000475482 BTBD2Q9BX70 525 aa14.28□□□□□ -0.12
CPSF3-203ENST00000475482 PIGUQ9H490 435 aa14.28□□□□□ -0.12
CPSF3-203ENST00000475482 CHST11Q9NPF2 352 aa14.28□□□□□ -0.12
CPSF3-203ENST00000475482 DUSP22Q9NRW4 184 aa14.28□□□□□ -0.12
CPSF3-203ENST00000475482 NKX1-2Q9UD57 310 aaPredicted RBP14.28□□□□□ -0.12
CPSF3-203ENST00000475482 A0A0G2JPF8 293 aa14.27□□□□□ -0.13
CPSF3-203ENST00000475482 OR14I1A6ND48 311 aa14.27□□□□□ -0.13
CPSF3-203ENST00000475482 HNRNPCL2B2RXH8 293 aa14.27□□□□□ -0.13
CPSF3-203ENST00000475482 HNRNPCL3B7ZW38 293 aa14.27□□□□□ -0.13
CPSF3-203ENST00000475482 H3BNX3 289 aa14.27□□□□□ -0.13
CPSF3-203ENST00000475482 SUSD5O60279 629 aa14.27□□□□□ -0.13
CPSF3-203ENST00000475482 CDC40O60508 579 aaKnown RBP eCLIP14.27□□□□□ -0.13
CPSF3-203ENST00000475482 PRKD3O94806 890 aa14.27□□□□□ -0.13
CPSF3-203ENST00000475482 TPOP07202 933 aa14.27□□□□□ -0.13
CPSF3-203ENST00000475482 HNRNPCL4P0DMR1 293 aa14.27□□□□□ -0.13
CPSF3-203ENST00000475482 GCKP35557 465 aa14.27□□□□□ -0.13
CPSF3-203ENST00000475482 MAGEA5P43359 124 aa14.27□□□□□ -0.13
CPSF3-203ENST00000475482 MAN2A2P49641 1150 aa14.27□□□□□ -0.13
CPSF3-203ENST00000475482 SESN3P58005 492 aa14.27□□□□□ -0.13
CPSF3-203ENST00000475482 DUSP8Q13202 625 aa14.27□□□□□ -0.13
CPSF3-203ENST00000475482 GPAT3Q53EU6 434 aa14.27□□□□□ -0.13
CPSF3-203ENST00000475482 SLC44A2Q8IWA5 706 aaPredicted RBP14.27□□□□□ -0.13
CPSF3-203ENST00000475482 TAGAPQ8N103 731 aa14.27□□□□□ -0.13
CPSF3-203ENST00000475482 ACBD4Q8NC06 268 aa14.27□□□□□ -0.13
CPSF3-203ENST00000475482 OR10G3Q8NGC4 313 aa14.27□□□□□ -0.13
CPSF3-203ENST00000475482 OR52R1Q8NGF1 315 aa14.27□□□□□ -0.13
CPSF3-203ENST00000475482 OR5D16Q8NGK9 328 aa14.27□□□□□ -0.13
CPSF3-203ENST00000475482 SLC9A6Q92581 669 aa14.27□□□□□ -0.13
CPSF3-203ENST00000475482 PMM1Q92871 262 aa14.27□□□□□ -0.13
CPSF3-203ENST00000475482 RAB8BQ92930 207 aa14.27□□□□□ -0.13
CPSF3-203ENST00000475482 SECISBP2Q96T21 854 aaKnown RBP14.27□□□□□ -0.13
CPSF3-203ENST00000475482 SEPHS2Q99611 448 aa14.27□□□□□ -0.13
CPSF3-203ENST00000475482 YIPF4Q9BSR8 244 aa14.27□□□□□ -0.13
CPSF3-203ENST00000475482 SERHL2Q9H4I8 314 aa14.27□□□□□ -0.13
CPSF3-203ENST00000475482 BCL2L10Q9HD36 194 aa14.27□□□□□ -0.13
CPSF3-203ENST00000475482 BAG5Q9UL15 447 aa14.27□□□□□ -0.13
CPSF3-203ENST00000475482 LIPGQ9Y5X9 500 aa14.27□□□□□ -0.13
CPSF3-203ENST00000475482 MYO9AB2RTY4 2548 aa14.27□□□□□ -0.13
CPSF3-203ENST00000475482 INTS1Q8N201 2190 aaKnown RBP14.26□□□□□ -0.13
CPSF3-203ENST00000475482 HCFC1P51610 2035 aa14.26□□□□□ -0.13
CPSF3-203ENST00000475482 LRRC3CA6NJW4 275 aa14.26□□□□□ -0.13
CPSF3-203ENST00000475482 AQP7O14520 342 aa14.26□□□□□ -0.13
CPSF3-203ENST00000475482 PGM3O95394 542 aa14.26□□□□□ -0.13
CPSF3-203ENST00000475482 CLDN14O95500 239 aa14.26□□□□□ -0.13
CPSF3-203ENST00000475482 CBX7O95931 251 aa14.26□□□□□ -0.13
CPSF3-203ENST00000475482 CELA3AP09093 270 aa14.26□□□□□ -0.13
CPSF3-203ENST00000475482 PRF1P14222 555 aa14.26□□□□□ -0.13
CPSF3-203ENST00000475482 ETS2P15036 469 aa14.26□□□□□ -0.13
CPSF3-203ENST00000475482 AQP1P29972 269 aa14.26□□□□□ -0.13
CPSF3-203ENST00000475482 PCBP3P57721 371 aaKnown RBP14.26□□□□□ -0.13
CPSF3-203ENST00000475482 SELENOWP63302 87 aa14.26□□□□□ -0.13
CPSF3-203ENST00000475482 ZNF155Q12901 538 aaPredicted RBP14.26□□□□□ -0.13
CPSF3-203ENST00000475482 CYBRD1Q53TN4 286 aa14.26□□□□□ -0.13
CPSF3-203ENST00000475482 C3P1Q6ZMU1 363 aa14.26□□□□□ -0.13
CPSF3-203ENST00000475482 LRRC74BQ6ZQY2 392 aa14.26□□□□□ -0.13
CPSF3-203ENST00000475482 MARVELD3Q96A59 401 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms