RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 TMEM236Q5W0B7 351 aa18.22■□□□□ 0.51
SSR1-204ENST00000474597 TMEM205Q6UW68 189 aa18.22■□□□□ 0.51
SSR1-204ENST00000474597 SATL1Q86VE3 508 aa18.22■□□□□ 0.51
SSR1-204ENST00000474597 NLGN4XQ8N0W4 816 aa18.22■□□□□ 0.51
SSR1-204ENST00000474597 GALNT6Q8NCL4 622 aa18.22■□□□□ 0.51
SSR1-204ENST00000474597 NFAM1Q8NET5 270 aaPredicted RBP18.22■□□□□ 0.51
SSR1-204ENST00000474597 PHOSPHO1Q8TCT1 267 aa18.22■□□□□ 0.51
SSR1-204ENST00000474597 GRHL3Q8TE85 626 aa18.22■□□□□ 0.51
SSR1-204ENST00000474597 ZNF566Q969W8 418 aa18.22■□□□□ 0.51
SSR1-204ENST00000474597 OMA1Q96E52 524 aa18.22■□□□□ 0.51
SSR1-204ENST00000474597 FAM46AQ96IP4 442 aaKnown RBP18.22■□□□□ 0.51
SSR1-204ENST00000474597 ZPBPQ9BS86 351 aa18.22■□□□□ 0.51
SSR1-204ENST00000474597 FAM192AQ9GZU8 254 aa18.22■□□□□ 0.51
SSR1-204ENST00000474597 TPRKBQ9Y3C4 175 aa18.22■□□□□ 0.51
SSR1-204ENST00000474597 GTPBP1O00178 669 aaKnown RBP18.21■□□□□ 0.51
SSR1-204ENST00000474597 TBXA2RP21731 343 aa18.21■□□□□ 0.51
SSR1-204ENST00000474597 ETV5P41161 510 aa18.21■□□□□ 0.51
SSR1-204ENST00000474597 ACAA2P42765 397 aaKnown RBP18.21■□□□□ 0.51
SSR1-204ENST00000474597 CXCR4P61073 352 aa18.21■□□□□ 0.51
SSR1-204ENST00000474597 TSPAN31Q12999 210 aa18.21■□□□□ 0.51
SSR1-204ENST00000474597 ISXQ2M1V0 245 aa18.21■□□□□ 0.51
SSR1-204ENST00000474597 BROXQ5VW32 411 aa18.21■□□□□ 0.51
SSR1-204ENST00000474597 LAIR2Q6ISS4 152 aa18.21■□□□□ 0.51
SSR1-204ENST00000474597 ZNF773Q6PK81 442 aa18.21■□□□□ 0.51
SSR1-204ENST00000474597 FAM198BQ6UWH4 519 aa18.21■□□□□ 0.51
SSR1-204ENST00000474597 NRMQ8IXM6 262 aa18.21■□□□□ 0.51
SSR1-204ENST00000474597 ZNF441Q8N8Z8 693 aa18.21■□□□□ 0.51
SSR1-204ENST00000474597 GATSQ8NAP1 163 aa18.21■□□□□ 0.51
SSR1-204ENST00000474597 APCDD1LQ8NCL9 501 aa18.21■□□□□ 0.51
SSR1-204ENST00000474597 UBE2FQ969M7 185 aa18.21■□□□□ 0.51
SSR1-204ENST00000474597 TP53INP1Q96A56 240 aa18.21■□□□□ 0.51
SSR1-204ENST00000474597 C8orf44Q96CB5 159 aa18.21■□□□□ 0.51
SSR1-204ENST00000474597 FLRT3Q9NZU0 649 aa18.21■□□□□ 0.51
SSR1-204ENST00000474597 AASSQ9UDR5 926 aa18.21■□□□□ 0.51
SSR1-204ENST00000474597 PISDQ9UG56 409 aa18.21■□□□□ 0.51
SSR1-204ENST00000474597 TEX51A0A1B0GUA7 166 aa18.21■□□□□ 0.51
SSR1-204ENST00000474597 PTGES3LE9PB15 166 aa18.21■□□□□ 0.51
SSR1-204ENST00000474597 NTN1O95631 604 aa18.21■□□□□ 0.51
SSR1-204ENST00000474597 UBL4AP11441 157 aa18.21■□□□□ 0.51
SSR1-204ENST00000474597 ABCD3P28288 659 aa18.21■□□□□ 0.51
SSR1-204ENST00000474597 ADH7P40394 386 aa18.21■□□□□ 0.51
SSR1-204ENST00000474597 OMPP47874 163 aa18.21■□□□□ 0.51
SSR1-204ENST00000474597 COPZ1P61923 177 aa18.21■□□□□ 0.51
SSR1-204ENST00000474597 NDUFAF6Q330K2 333 aa18.21■□□□□ 0.51
SSR1-204ENST00000474597 RNF113BQ8IZP6 322 aaKnown RBP18.21■□□□□ 0.51
SSR1-204ENST00000474597 CADM2Q8N3J6 435 aa18.21■□□□□ 0.51
SSR1-204ENST00000474597 TMEM239Q8WW34 195 aa18.21■□□□□ 0.51
SSR1-204ENST00000474597 ARSGQ96EG1 525 aa18.21■□□□□ 0.51
SSR1-204ENST00000474597 TAAR9Q96RI9 348 aa18.21■□□□□ 0.51
SSR1-204ENST00000474597 MESP1Q9BRJ9 268 aa18.21■□□□□ 0.51
SSR1-204ENST00000474597 CNIH4Q9P003 139 aa18.21■□□□□ 0.51
SSR1-204ENST00000474597 PPIEQ9UNP9 301 aaKnown RBP18.21■□□□□ 0.51
SSR1-204ENST00000474597 PTRH2Q9Y3E5 179 aaKnown RBP18.21■□□□□ 0.51
SSR1-204ENST00000474597 TRBV11-1A0A0K0K1C0 115 aa18.2■□□□□ 0.5
SSR1-204ENST00000474597 CHP2O43745 196 aa18.2■□□□□ 0.5
SSR1-204ENST00000474597 MPZL2O60487 215 aa18.2■□□□□ 0.5
SSR1-204ENST00000474597 TSPAN2O60636 221 aa18.2■□□□□ 0.5
SSR1-204ENST00000474597 FAM20BO75063 409 aa18.2■□□□□ 0.5
SSR1-204ENST00000474597 ICOSLGO75144 302 aa18.2■□□□□ 0.5
SSR1-204ENST00000474597 CSO75390 466 aaKnown RBP18.2■□□□□ 0.5
SSR1-204ENST00000474597 STK17BO94768 372 aa18.2■□□□□ 0.5
SSR1-204ENST00000474597 PNLIPRP2P54317 469 aa18.2■□□□□ 0.5
SSR1-204ENST00000474597 CSNK2BP67870 215 aa18.2■□□□□ 0.5
SSR1-204ENST00000474597 NCF4Q15080 339 aa18.2■□□□□ 0.5
SSR1-204ENST00000474597 NADK2Q4G0N4 442 aa18.2■□□□□ 0.5
SSR1-204ENST00000474597 CASP12Q6UXS9 341 aa18.2■□□□□ 0.5
SSR1-204ENST00000474597 MEX3DQ86XN8 651 aaKnown RBP18.2■□□□□ 0.5
SSR1-204ENST00000474597 LSMEM1Q8N8F7 131 aa18.2■□□□□ 0.5
SSR1-204ENST00000474597 LIN37Q96GY3 246 aaPredicted RBP18.2■□□□□ 0.5
SSR1-204ENST00000474597 GPA33Q99795 319 aa18.2■□□□□ 0.5
SSR1-204ENST00000474597 WDR77Q9BQA1 342 aaPredicted RBP18.2■□□□□ 0.5
SSR1-204ENST00000474597 PRSS27Q9BQR3 290 aa18.2■□□□□ 0.5
SSR1-204ENST00000474597 LIN28AQ9H9Z2 209 aaKnown RBP18.2■□□□□ 0.5
SSR1-204ENST00000474597 VCX3AQ9NNX9 186 aa18.2■□□□□ 0.5
SSR1-204ENST00000474597 NDUFA13Q9P0J0 144 aa18.2■□□□□ 0.5
SSR1-204ENST00000474597 PCDHGA1Q9Y5H4 931 aa18.2■□□□□ 0.5
SSR1-204ENST00000474597 A0A0B4J2E0 115 aa18.19■□□□□ 0.5
SSR1-204ENST00000474597 A0A1B0GWA3 101 aa18.19■□□□□ 0.5
SSR1-204ENST00000474597 A0A1B0GX12 115 aa18.19■□□□□ 0.5
SSR1-204ENST00000474597 TRIM64CA6NLI5 447 aa18.19■□□□□ 0.5
SSR1-204ENST00000474597 XPNPEP2O43895 674 aa18.19■□□□□ 0.5
SSR1-204ENST00000474597 PIP5K1CO60331 668 aa18.19■□□□□ 0.5
SSR1-204ENST00000474597 MT-CO3P00414 261 aa18.19■□□□□ 0.5
SSR1-204ENST00000474597 IGFBP1P08833 259 aaPredicted RBP18.19■□□□□ 0.5
SSR1-204ENST00000474597 PTNP21246 168 aa18.19■□□□□ 0.5
SSR1-204ENST00000474597 GPR4P46093 362 aa18.19■□□□□ 0.5
SSR1-204ENST00000474597 CLDN6P56747 220 aa18.19■□□□□ 0.5
SSR1-204ENST00000474597 SLC26A5P58743 744 aa18.19■□□□□ 0.5
SSR1-204ENST00000474597 ALG10BQ5I7T1 473 aa18.19■□□□□ 0.5
SSR1-204ENST00000474597 CDCP2Q5VXM1 449 aa18.19■□□□□ 0.5
SSR1-204ENST00000474597 PTCHD4Q6ZW05 846 aa18.19■□□□□ 0.5
SSR1-204ENST00000474597 SLCO6A1Q86UG4 719 aa18.19■□□□□ 0.5
SSR1-204ENST00000474597 CDK20Q8IZL9 346 aa18.19■□□□□ 0.5
SSR1-204ENST00000474597 TMCO5AQ8N6Q1 288 aa18.19■□□□□ 0.5
SSR1-204ENST00000474597 OR5L2Q8NGL0 311 aa18.19■□□□□ 0.5
SSR1-204ENST00000474597 NUBPLQ8TB37 319 aa18.19■□□□□ 0.5
SSR1-204ENST00000474597 TEX47Q8TBZ9 253 aa18.19■□□□□ 0.5
SSR1-204ENST00000474597 HS6ST2Q96MM7 605 aa18.19■□□□□ 0.5
SSR1-204ENST00000474597 DEPDC7Q96QD5 511 aa18.19■□□□□ 0.5
SSR1-204ENST00000474597 ZNF223Q9UK11 482 aaPredicted RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms