RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 RPL32P62910 135 aaKnown RBP3.24□□□□□ -1.89
UBR3-208ENST00000474426 RPL19P84098 196 aaKnown RBP3.24□□□□□ -1.89
UBR3-208ENST00000474426 TFAMQ00059 246 aaKnown RBP3.24□□□□□ -1.89
UBR3-208ENST00000474426 GNA12Q03113 381 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 ZNF239Q16600 458 aaKnown RBP3.24□□□□□ -1.89
UBR3-208ENST00000474426 MAN2A1Q16706 1144 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 CCDC157Q569K6 752 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 RNF44Q7L0R7 432 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 PAQR7Q86WK9 346 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 TMEM192Q8IY95 271 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 EIF4E3Q8N5X7 224 aaKnown RBP3.24□□□□□ -1.89
UBR3-208ENST00000474426 OR4K2Q8NGD2 314 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 PIGXQ8TBF5 258 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 MAPK15Q8TD08 544 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 EMG1Q92979 244 aaKnown RBP3.24□□□□□ -1.89
UBR3-208ENST00000474426 ANKRD9Q96BM1 317 aaPredicted RBP3.24□□□□□ -1.89
UBR3-208ENST00000474426 ISOC1Q96CN7 298 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 SNRNP40Q96DI7 357 aaKnown RBP3.24□□□□□ -1.89
UBR3-208ENST00000474426 MS4A14Q96JA4 679 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 TMEM209Q96SK2 561 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 GPA33Q99795 319 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 EGFL8Q99944 293 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 ZNF426Q9BUY5 554 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 SUCNR1Q9BXA5 334 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 REG4Q9BYZ8 158 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 SRD5A3Q9H8P0 318 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 XPNPEP3Q9NQH7 507 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 SPHK2Q9NRA0 654 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 CUTCQ9NTM9 273 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 OR6C3Q9NZP0 311 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 THAP10Q9P2Z0 257 aaPredicted RBP3.24□□□□□ -1.89
UBR3-208ENST00000474426 RNF115Q9Y4L5 304 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 PRSS21Q9Y6M0 314 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 FMN1Q68DA7 1419 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 FGD6Q6ZV73 1430 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 SNED1Q8TER0 1413 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 A0A087WV48 116 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 FAM74A7A6NL05 159 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 SIAH2O43255 324 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 MSCO60682 206 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 SUPT7LO94864 414 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 OR2F2O95006 317 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 FGF19O95750 216 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 INHAP05111 366 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 ARSBP15848 533 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 IL1RNP18510 177 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 TIA1P31483 386 aaKnown RBP eCLIP3.23□□□□□ -1.89
UBR3-208ENST00000474426 SPRP35270 261 aaPredicted RBP3.23□□□□□ -1.89
UBR3-208ENST00000474426 LIPAP38571 399 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 ASCL1P50553 236 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 MAGOHP61326 146 aaKnown RBP3.23□□□□□ -1.89
UBR3-208ENST00000474426 RRAS2P62070 204 aaPredicted RBP3.23□□□□□ -1.89
UBR3-208ENST00000474426 SELENOTP62341 195 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 SLC6A3Q01959 620 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 EMX2Q04743 252 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 SLC10A7Q0GE19 358 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 SEMA3BQ13214 749 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 CDKN3Q16667 212 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 FAM74A3Q4VXF1 159 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 CTSL3PQ5NE16 218 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 TMEM211Q6ICI0 200 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 OR52W1Q6IF63 320 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 FIGNL1Q6PIW4 674 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 XKRXQ6PP77 449 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 BAIAP2L2Q6UXY1 529 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 APTXQ7Z2E3 356 aaKnown RBP3.23□□□□□ -1.89
UBR3-208ENST00000474426 UNC93AQ86WB7 457 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 C4orf19Q8IY42 314 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 PQLC1Q8N2U9 271 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 FITM2Q8N6M3 262 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 FAM71CQ8NEG0 241 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 FAM46DQ8NEK8 389 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 OR2AP1Q8NGE2 309 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 OR9G4Q8NGQ1 327 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 OR1K1Q8NGR3 316 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 OR6K3Q8NGY3 331 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 APH1BQ8WW43 257 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 SORCS1Q8WY21 1168 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 TM9SF4Q92544 642 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 STMN2Q93045 179 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 LHX4Q969G2 390 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 MCHR2Q969V1 340 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 PTH2Q96A98 100 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 OTULINQ96BN8 352 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 C12orf43Q96C57 262 aaKnown RBP3.23□□□□□ -1.89
UBR3-208ENST00000474426 ATF6BQ99941 703 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 INPP5KQ9BT40 448 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 NDUFAF3Q9BU61 184 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 SNHG12Q9BXW3 62 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 SPATC1LQ9H0A9 340 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 EPB41L4BQ9H329 900 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 LANCL2Q9NS86 450 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 USE1Q9NZ43 259 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 METTL1Q9UBP6 276 aaKnown RBP3.23□□□□□ -1.89
UBR3-208ENST00000474426 PPP2R2CQ9Y2T4 447 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 INO80Q9ULG1 1556 aaPredicted RBP3.23□□□□□ -1.89
UBR3-208ENST00000474426 KDM6AO15550 1401 aaPredicted RBP3.23□□□□□ -1.89
UBR3-208ENST00000474426 NAIPQ13075 1403 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 PPRC1Q5VV67 1664 aaKnown RBP3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms