RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 ACCSQ96QU6 501 aa5.65□□□□□ -1.51
SMARCE1-208ENST00000474246 MTERF1Q99551 399 aaKnown RBP5.65□□□□□ -1.51
SMARCE1-208ENST00000474246 FEM1AQ9BSK4 669 aa5.65□□□□□ -1.51
SMARCE1-208ENST00000474246 WRAP53Q9BUR4 548 aaKnown RBP5.65□□□□□ -1.51
SMARCE1-208ENST00000474246 TPSD1Q9BZJ3 242 aa5.65□□□□□ -1.51
SMARCE1-208ENST00000474246 DUSP15Q9H1R2 295 aaPredicted RBP5.65□□□□□ -1.51
SMARCE1-208ENST00000474246 KCNK9Q9NPC2 374 aa5.65□□□□□ -1.51
SMARCE1-208ENST00000474246 TMEM9Q9P0T7 183 aa5.65□□□□□ -1.51
SMARCE1-208ENST00000474246 PAK5Q9P286 719 aa5.65□□□□□ -1.51
SMARCE1-208ENST00000474246 ZNF282Q9UDV7 671 aaPredicted RBP5.65□□□□□ -1.51
SMARCE1-208ENST00000474246 PITPNC1Q9UKF7 332 aa5.65□□□□□ -1.51
SMARCE1-208ENST00000474246 RCE1Q9Y256 329 aa5.65□□□□□ -1.51
SMARCE1-208ENST00000474246 TSSC4Q9Y5U2 329 aaPredicted RBP5.65□□□□□ -1.51
SMARCE1-208ENST00000474246 OAS3Q9Y6K5 1087 aaKnown RBP5.65□□□□□ -1.51
SMARCE1-208ENST00000474246 NBEAQ8NFP9 2946 aa5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 CNTNAP5Q8WYK1 1306 aa5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 A0A0U1RRA0 63 aa5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 A0A1B0GVL5 298 aa5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 C9orf170A2RU37 121 aa5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 C9orf172C9J069 976 aa5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 CDC7O00311 574 aa5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 PSMG1O95456 288 aa5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 PET100P0DJ07 73 aa5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 PIM1P11309 404 aaPredicted RBP5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 SCGB1A1P11684 91 aa5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 ARR3P36575 388 aa5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 KIR2DL1P43626 348 aaPredicted RBP5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 KIR3DL1P43629 444 aa5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 IDH2P48735 452 aaKnown RBP5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 ACOT2P49753 483 aa5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 IDH3GP51553 393 aaPredicted RBP5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 GALCP54803 685 aa5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 UCNP55089 124 aa5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 CDR2Q01850 454 aa5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 NAAAQ02083 359 aa5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 SEMG2Q02383 582 aa5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 CKAP4Q07065 602 aaKnown RBP5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 DBPQ10586 325 aaPredicted RBP5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 KRR1Q13601 381 aaKnown RBP5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 PCOLCEQ15113 449 aa5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 CCL14Q16627 93 aa5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 LIN52Q52LA3 116 aa5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 PLAG1Q6DJT9 500 aa5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 TXNRD3NBQ6F5E7 133 aa5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 MED25Q71SY5 747 aa5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 FAM90A1Q86YD7 464 aa5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 ZC3H3Q8IXZ2 948 aaKnown RBP5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 EID3Q8N140 333 aa5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 LCORLQ8N3X6 602 aa5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 HSD17B11Q8NBQ5 300 aa5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 C16orf78Q8WTQ4 265 aa5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 ST8SIA1Q92185 356 aa5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 STMN2Q93045 179 aa5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 SLC35C1Q96A29 364 aa5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 C18orf25Q96B23 403 aaPredicted RBP5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 PPWD1Q96BP3 646 aaKnown RBP5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 BIRC7Q96CA5 298 aa5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 CDKN2AIPNLQ96HQ2 116 aa5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 STACQ99469 402 aa5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 AIF1LQ9BQI0 150 aa5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 OLFML3Q9NRN5 406 aa5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 SLC38A7Q9NVC3 462 aa5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 SMPD4Q9NXE4 827 aa5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 PRSS50Q9UI38 385 aa5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 SLC27A6Q9Y2P4 619 aa5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 DNHD1Q96M86 4753 aa5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 AK9Q5TCS8 1911 aa5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 EMSYQ7Z589 1322 aa5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 ZNF532Q9HCE3 1301 aa5.64□□□□□ -1.51
SMARCE1-208ENST00000474246 NKX6-3A6NJ46 265 aa5.63□□□□□ -1.51
SMARCE1-208ENST00000474246 SAGE2PA6NJ88 616 aa5.63□□□□□ -1.51
SMARCE1-208ENST00000474246 SHISA8B8ZZ34 492 aa5.63□□□□□ -1.51
SMARCE1-208ENST00000474246 M0R036 132 aa5.63□□□□□ -1.51
SMARCE1-208ENST00000474246 TRAFD1O14545 582 aaPredicted RBP5.63□□□□□ -1.51
SMARCE1-208ENST00000474246 ADAM10O14672 748 aa5.63□□□□□ -1.51
SMARCE1-208ENST00000474246 OR10H2O60403 315 aa5.63□□□□□ -1.51
SMARCE1-208ENST00000474246 ZNF623O75123 536 aa5.63□□□□□ -1.51
SMARCE1-208ENST00000474246 DCTN3O75935 186 aa5.63□□□□□ -1.51
SMARCE1-208ENST00000474246 SOX30O94993 753 aa5.63□□□□□ -1.51
SMARCE1-208ENST00000474246 ADAP00813 363 aa5.63□□□□□ -1.51
SMARCE1-208ENST00000474246 SERPINE2P07093 398 aa5.63□□□□□ -1.51
SMARCE1-208ENST00000474246 FCGR1AP12314 374 aa5.63□□□□□ -1.51
SMARCE1-208ENST00000474246 NID1P14543 1247 aa5.63□□□□□ -1.51
SMARCE1-208ENST00000474246 ETS2P15036 469 aa5.63□□□□□ -1.51
SMARCE1-208ENST00000474246 ANXA7P20073 488 aaKnown RBP5.63□□□□□ -1.51
SMARCE1-208ENST00000474246 PROZP22891 400 aa5.63□□□□□ -1.51
SMARCE1-208ENST00000474246 ACVR1BP36896 505 aa5.63□□□□□ -1.51
SMARCE1-208ENST00000474246 CEACAM6P40199 344 aa5.63□□□□□ -1.51
SMARCE1-208ENST00000474246 MAGEA12P43365 314 aa5.63□□□□□ -1.51
SMARCE1-208ENST00000474246 RAP1BP61224 184 aa5.63□□□□□ -1.51
SMARCE1-208ENST00000474246 ZNF91Q05481 1191 aa5.63□□□□□ -1.51
SMARCE1-208ENST00000474246 GRB7Q14451 532 aa5.63□□□□□ -1.51
SMARCE1-208ENST00000474246 RAB39AQ14964 217 aa5.63□□□□□ -1.51
SMARCE1-208ENST00000474246 OR4D1Q15615 310 aa5.63□□□□□ -1.51
SMARCE1-208ENST00000474246 GPR19Q15760 415 aa5.63□□□□□ -1.51
SMARCE1-208ENST00000474246 SOWAHAQ2M3V2 549 aa5.63□□□□□ -1.51
SMARCE1-208ENST00000474246 POM121L1PQ3SYA9 428 aa5.63□□□□□ -1.51
SMARCE1-208ENST00000474246 SLC36A2Q495M3 483 aa5.63□□□□□ -1.51
SMARCE1-208ENST00000474246 ASPHD2Q6ICH7 369 aa5.63□□□□□ -1.51
SMARCE1-208ENST00000474246 LYPD4Q6UWN0 246 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms