RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 RFKQ969G6 155 aa10.17□□□□□ -0.78
C9orf3-214ENST00000473778 OMA1Q96E52 524 aa10.17□□□□□ -0.78
C9orf3-214ENST00000473778 TIMM29Q9BSF4 260 aa10.17□□□□□ -0.78
C9orf3-214ENST00000473778 WACQ9BTA9 647 aa10.17□□□□□ -0.78
C9orf3-214ENST00000473778 RSPH9Q9H1X1 276 aaPredicted RBP10.17□□□□□ -0.78
C9orf3-214ENST00000473778 OR52D1Q9H346 318 aa10.17□□□□□ -0.78
C9orf3-214ENST00000473778 KCMF1Q9P0J7 381 aa10.17□□□□□ -0.78
C9orf3-214ENST00000473778 TNFRSF10DQ9UBN6 386 aa10.17□□□□□ -0.78
C9orf3-214ENST00000473778 TBC1D29Q9UFV1 150 aa10.17□□□□□ -0.78
C9orf3-214ENST00000473778 ZNF223Q9UK11 482 aaPredicted RBP10.17□□□□□ -0.78
C9orf3-214ENST00000473778 ZNF780BQ9Y6R6 833 aa10.17□□□□□ -0.78
C9orf3-214ENST00000473778 A0A1W2PQ72 361 aa10.17□□□□□ -0.78
C9orf3-214ENST00000473778 PEX12O00623 359 aa10.17□□□□□ -0.78
C9orf3-214ENST00000473778 BHLHE40O14503 412 aa10.17□□□□□ -0.78
C9orf3-214ENST00000473778 RNF13O43567 381 aa10.17□□□□□ -0.78
C9orf3-214ENST00000473778 REM1O75628 298 aa10.17□□□□□ -0.78
C9orf3-214ENST00000473778 LYPD3O95274 346 aa10.17□□□□□ -0.78
C9orf3-214ENST00000473778 YES1P07947 543 aa10.17□□□□□ -0.78
C9orf3-214ENST00000473778 AK4P27144 223 aaPredicted RBP10.17□□□□□ -0.78
C9orf3-214ENST00000473778 HLA-DMAP28067 261 aa10.17□□□□□ -0.78
C9orf3-214ENST00000473778 SHC1P29353 583 aa10.17□□□□□ -0.78
C9orf3-214ENST00000473778 NOS3P29474 1203 aa10.17□□□□□ -0.78
C9orf3-214ENST00000473778 EVI2BP34910 448 aa10.17□□□□□ -0.78
C9orf3-214ENST00000473778 THBS2P35442 1172 aa10.17□□□□□ -0.78
C9orf3-214ENST00000473778 ATP6V1E1P36543 226 aa10.17□□□□□ -0.78
C9orf3-214ENST00000473778 ANXA11P50995 505 aaKnown RBP10.17□□□□□ -0.78
C9orf3-214ENST00000473778 ARFIP1P53367 373 aa10.17□□□□□ -0.78
C9orf3-214ENST00000473778 E2F1Q01094 437 aa10.17□□□□□ -0.78
C9orf3-214ENST00000473778 RIN1Q13671 783 aa10.17□□□□□ -0.78
C9orf3-214ENST00000473778 GPR68Q15743 365 aa10.17□□□□□ -0.78
C9orf3-214ENST00000473778 TMEM240Q5SV17 173 aa10.17□□□□□ -0.78
C9orf3-214ENST00000473778 TRIQKQ629K1 86 aa10.17□□□□□ -0.78
C9orf3-214ENST00000473778 NIPAL3Q6P499 406 aa10.17□□□□□ -0.78
C9orf3-214ENST00000473778 NRROSQ86YC3 692 aa10.17□□□□□ -0.78
C9orf3-214ENST00000473778 C19orf18Q8NEA5 215 aa10.17□□□□□ -0.78
C9orf3-214ENST00000473778 OR5H6Q8NGV6 325 aa10.17□□□□□ -0.78
C9orf3-214ENST00000473778 CCL4L1Q8NHW4 92 aa10.17□□□□□ -0.78
C9orf3-214ENST00000473778 BADQ92934 168 aa10.17□□□□□ -0.78
C9orf3-214ENST00000473778 PTP4A1Q93096 173 aa10.17□□□□□ -0.78
C9orf3-214ENST00000473778 GFM1Q96RP9 751 aaKnown RBP10.17□□□□□ -0.78
C9orf3-214ENST00000473778 GALNT9Q9HCQ5 603 aa10.17□□□□□ -0.78
C9orf3-214ENST00000473778 PHPT1Q9NRX4 125 aaPredicted RBP10.17□□□□□ -0.78
C9orf3-214ENST00000473778 ACOXLQ9NUZ1 547 aa10.17□□□□□ -0.78
C9orf3-214ENST00000473778 ZMIZ1Q9ULJ6 1067 aa10.17□□□□□ -0.78
C9orf3-214ENST00000473778 WDR45Q9Y484 360 aa10.17□□□□□ -0.78
C9orf3-214ENST00000473778 PCDHGB7Q9Y5F8 929 aa10.17□□□□□ -0.78
C9orf3-214ENST00000473778 TRBV23OR9-2A0A075B6M9 112 aa10.16□□□□□ -0.78
C9orf3-214ENST00000473778 GSAPA4D1B5 854 aa10.16□□□□□ -0.78
C9orf3-214ENST00000473778 ZNF860A6NHJ4 632 aa10.16□□□□□ -0.78
C9orf3-214ENST00000473778 GPR89AB7ZAQ6 455 aa10.16□□□□□ -0.78
C9orf3-214ENST00000473778 AKR7A2O43488 359 aa10.16□□□□□ -0.78
C9orf3-214ENST00000473778 CTSVO60911 334 aa10.16□□□□□ -0.78
C9orf3-214ENST00000473778 RFPL3O75679 317 aa10.16□□□□□ -0.78
C9orf3-214ENST00000473778 OR5F1O95221 314 aa10.16□□□□□ -0.78
C9orf3-214ENST00000473778 EIF4EP06730 217 aaKnown RBP10.16□□□□□ -0.78
C9orf3-214ENST00000473778 GPR89BP0CG08 455 aa10.16□□□□□ -0.78
C9orf3-214ENST00000473778 GAAP10253 952 aa10.16□□□□□ -0.78
C9orf3-214ENST00000473778 HTR2BP41595 481 aa10.16□□□□□ -0.78
C9orf3-214ENST00000473778 CLDN20P56880 219 aa10.16□□□□□ -0.78
C9orf3-214ENST00000473778 TAGLNQ01995 201 aaKnown RBP10.16□□□□□ -0.78
C9orf3-214ENST00000473778 FAPQ12884 760 aa10.16□□□□□ -0.78
C9orf3-214ENST00000473778 RUNX2Q13950 521 aa10.16□□□□□ -0.78
C9orf3-214ENST00000473778 DEFB134Q4QY38 66 aa10.16□□□□□ -0.78
C9orf3-214ENST00000473778 IDNKQ5T6J7 187 aa10.16□□□□□ -0.78
C9orf3-214ENST00000473778 CDC73Q6P1J9 531 aa10.16□□□□□ -0.78
C9orf3-214ENST00000473778 FBXO42Q6P3S6 717 aa10.16□□□□□ -0.78
C9orf3-214ENST00000473778 SYCE2Q6PIF2 218 aa10.16□□□□□ -0.78
C9orf3-214ENST00000473778 RPTNQ6XPR3 784 aa10.16□□□□□ -0.78
C9orf3-214ENST00000473778 PRSS41Q7RTY9 318 aa10.16□□□□□ -0.78
C9orf3-214ENST00000473778 PAQR7Q86WK9 346 aa10.16□□□□□ -0.78
C9orf3-214ENST00000473778 OR2L13Q8N349 312 aa10.16□□□□□ -0.78
C9orf3-214ENST00000473778 RFLNBQ8N5W9 214 aa10.16□□□□□ -0.78
C9orf3-214ENST00000473778 C17orf47Q8NEP4 570 aa10.16□□□□□ -0.78
C9orf3-214ENST00000473778 ZCCHC10Q8TBK6 192 aa10.16□□□□□ -0.78
C9orf3-214ENST00000473778 MS4A4EQ96PG1 132 aa10.16□□□□□ -0.78
C9orf3-214ENST00000473778 SDF2Q99470 211 aa10.16□□□□□ -0.78
C9orf3-214ENST00000473778 MARVELD1Q9BSK0 173 aa10.16□□□□□ -0.78
C9orf3-214ENST00000473778 ALG8Q9BVK2 526 aa10.16□□□□□ -0.78
C9orf3-214ENST00000473778 MED17Q9NVC6 651 aa10.16□□□□□ -0.78
C9orf3-214ENST00000473778 MCUBQ9NWR8 336 aa10.16□□□□□ -0.78
C9orf3-214ENST00000473778 NTMQ9P121 344 aa10.16□□□□□ -0.78
C9orf3-214ENST00000473778 POLHQ9Y253 713 aa10.16□□□□□ -0.78
C9orf3-214ENST00000473778 A0A1W2PQU0 124 aa10.16□□□□□ -0.78
C9orf3-214ENST00000473778 POM121BA6NF01 834 aa10.16□□□□□ -0.78
C9orf3-214ENST00000473778 SHOXO15266 292 aa10.16□□□□□ -0.78
C9orf3-214ENST00000473778 ADAM11O75078 769 aa10.16□□□□□ -0.78
C9orf3-214ENST00000473778 CPNE3O75131 537 aaKnown RBP10.16□□□□□ -0.78
C9orf3-214ENST00000473778 MRPL3P09001 348 aaKnown RBP10.16□□□□□ -0.78
C9orf3-214ENST00000473778 GLULP15104 373 aa10.16□□□□□ -0.78
C9orf3-214ENST00000473778 TEAD1P28347 426 aa10.16□□□□□ -0.78
C9orf3-214ENST00000473778 RUNX3Q13761 415 aa10.16□□□□□ -0.78
C9orf3-214ENST00000473778 LAMTOR1Q6IAA8 161 aa10.16□□□□□ -0.78
C9orf3-214ENST00000473778 ZAR1Q86SH2 424 aa10.16□□□□□ -0.78
C9orf3-214ENST00000473778 TCTE3Q8IZS6 198 aa10.16□□□□□ -0.78
C9orf3-214ENST00000473778 GJD3Q8N144 294 aa10.16□□□□□ -0.78
C9orf3-214ENST00000473778 LRRC25Q8N386 305 aaPredicted RBP10.16□□□□□ -0.78
C9orf3-214ENST00000473778 TMEM52Q8NDY8 209 aa10.16□□□□□ -0.78
C9orf3-214ENST00000473778 FLVCR1-AS1Q8TAF5 88 aa10.16□□□□□ -0.78
C9orf3-214ENST00000473778 JAM3Q9BX67 310 aa10.16□□□□□ -0.78
C9orf3-214ENST00000473778 RAB11FIP5Q9BXF6 653 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms