RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 SPG11Q96JI7 2443 aa16.36■□□□□ 0.21
SNX4-204ENST00000473417 NUP214P35658 2090 aaPredicted RBP16.35■□□□□ 0.21
SNX4-204ENST00000473417 A0A096LPI6 279 aa16.35■□□□□ 0.21
SNX4-204ENST00000473417 A0A1W2PP18 115 aa16.35■□□□□ 0.21
SNX4-204ENST00000473417 STX11O75558 287 aa16.35■□□□□ 0.21
SNX4-204ENST00000473417 BMP7P18075 431 aa16.35■□□□□ 0.21
SNX4-204ENST00000473417 TCEA1P23193 301 aaKnown RBP16.35■□□□□ 0.21
SNX4-204ENST00000473417 TIMP3P35625 211 aa16.35■□□□□ 0.21
SNX4-204ENST00000473417 CRATP43155 626 aa16.35■□□□□ 0.21
SNX4-204ENST00000473417 ANXA11P50995 505 aaKnown RBP16.35■□□□□ 0.21
SNX4-204ENST00000473417 C17orf67Q0P5P2 114 aa16.35■□□□□ 0.21
SNX4-204ENST00000473417 NSUN5P2Q63ZY6 315 aa16.35■□□□□ 0.21
SNX4-204ENST00000473417 HEPHL1Q6MZM0 1159 aa16.35■□□□□ 0.21
SNX4-204ENST00000473417 TNIP2Q8NFZ5 429 aa16.35■□□□□ 0.21
SNX4-204ENST00000473417 OR2M3Q8NG83 312 aa16.35■□□□□ 0.21
SNX4-204ENST00000473417 OR14L1PQ8NHC6 308 aa16.35■□□□□ 0.21
SNX4-204ENST00000473417 C10orf82Q8WW14 230 aa16.35■□□□□ 0.21
SNX4-204ENST00000473417 ROPN1LQ96C74 230 aa16.35■□□□□ 0.21
SNX4-204ENST00000473417 HOXD1Q9GZZ0 328 aa16.35■□□□□ 0.21
SNX4-204ENST00000473417 FAM107BQ9H098 131 aa16.35■□□□□ 0.21
SNX4-204ENST00000473417 DKKL1Q9UK85 242 aa16.35■□□□□ 0.21
SNX4-204ENST00000473417 MKLN1Q9UL63 735 aa16.35■□□□□ 0.21
SNX4-204ENST00000473417 CAMK2AQ9UQM7 478 aa16.35■□□□□ 0.21
SNX4-204ENST00000473417 PCNX3Q9H6A9 2034 aa16.35■□□□□ 0.21
SNX4-204ENST00000473417 PRAMEF27A3QJZ7 478 aa16.34■□□□□ 0.21
SNX4-204ENST00000473417 CLIC1O00299 241 aa16.34■□□□□ 0.21
SNX4-204ENST00000473417 DPP4P27487 766 aa16.34■□□□□ 0.21
SNX4-204ENST00000473417 SRD5A2P31213 254 aa16.34■□□□□ 0.21
SNX4-204ENST00000473417 LSP1P33241 339 aa16.34■□□□□ 0.21
SNX4-204ENST00000473417 MVDP53602 400 aa16.34■□□□□ 0.21
SNX4-204ENST00000473417 ATP12AP54707 1039 aa16.34■□□□□ 0.21
SNX4-204ENST00000473417 GNGT1P63211 74 aa16.34■□□□□ 0.21
SNX4-204ENST00000473417 FUT5Q11128 374 aa16.34■□□□□ 0.21
SNX4-204ENST00000473417 MYBPHQ13203 477 aa16.34■□□□□ 0.21
SNX4-204ENST00000473417 SF3B4Q15427 424 aaKnown RBP eCLIP16.34■□□□□ 0.21
SNX4-204ENST00000473417 CD226Q15762 336 aa16.34■□□□□ 0.21
SNX4-204ENST00000473417 GPAT3Q53EU6 434 aa16.34■□□□□ 0.21
SNX4-204ENST00000473417 POMZP3Q6PJE2 187 aa16.34■□□□□ 0.21
SNX4-204ENST00000473417 ZNF614Q8N883 585 aa16.34■□□□□ 0.21
SNX4-204ENST00000473417 ANKFN1Q8N957 763 aa16.34■□□□□ 0.21
SNX4-204ENST00000473417 FADS6Q8N9I5 356 aa16.34■□□□□ 0.21
SNX4-204ENST00000473417 ZNF527Q8NB42 609 aa16.34■□□□□ 0.21
SNX4-204ENST00000473417 ABTB1Q969K4 478 aaPredicted RBP16.34■□□□□ 0.21
SNX4-204ENST00000473417 WDYHV1Q96HA8 205 aa16.34■□□□□ 0.21
SNX4-204ENST00000473417 ELAC2Q9BQ52 826 aaKnown RBP16.34■□□□□ 0.21
SNX4-204ENST00000473417 OR2B2Q9GZK3 357 aa16.34■□□□□ 0.21
SNX4-204ENST00000473417 ZNF350Q9GZX5 532 aa16.34■□□□□ 0.21
SNX4-204ENST00000473417 SAR1AQ9NR31 198 aa16.34■□□□□ 0.21
SNX4-204ENST00000473417 TAS2R10Q9NYW0 307 aa16.34■□□□□ 0.21
SNX4-204ENST00000473417 SLC25A37Q9NYZ2 338 aa16.34■□□□□ 0.21
SNX4-204ENST00000473417 LEF1Q9UJU2 399 aaPredicted RBP16.34■□□□□ 0.21
SNX4-204ENST00000473417 RPH3AQ9Y2J0 694 aaPredicted RBP16.34■□□□□ 0.21
SNX4-204ENST00000473417 NDUFAF1Q9Y375 327 aa16.34■□□□□ 0.21
SNX4-204ENST00000473417 MED13LQ71F56 2210 aa16.34■□□□□ 0.21
SNX4-204ENST00000473417 A0A1W2PQD3 144 aa16.33■□□□□ 0.2
SNX4-204ENST00000473417 MBD3L4A6NDZ8 208 aaPredicted RBP16.33■□□□□ 0.2
SNX4-204ENST00000473417 MBD3L3A6NE82 208 aaPredicted RBP16.33■□□□□ 0.2
SNX4-204ENST00000473417 MBD3L5A6NJ08 208 aaPredicted RBP16.33■□□□□ 0.2
SNX4-204ENST00000473417 CD8B2A6NJW9 211 aa16.33■□□□□ 0.2
SNX4-204ENST00000473417 NPIPB9F8W1W9 429 aa16.33■□□□□ 0.2
SNX4-204ENST00000473417 DVL2O14641 736 aa16.33■□□□□ 0.2
SNX4-204ENST00000473417 ANGPT2O15123 496 aa16.33■□□□□ 0.2
SNX4-204ENST00000473417 ACTL6AO96019 429 aa16.33■□□□□ 0.2
SNX4-204ENST00000473417 ETFAP13804 333 aa16.33■□□□□ 0.2
SNX4-204ENST00000473417 HOXB9P17482 250 aaPredicted RBP16.33■□□□□ 0.2
SNX4-204ENST00000473417 ASCL1P50553 236 aa16.33■□□□□ 0.2
SNX4-204ENST00000473417 ZNF136P52737 540 aa16.33■□□□□ 0.2
SNX4-204ENST00000473417 DSCR4P56555 118 aaPredicted RBP16.33■□□□□ 0.2
SNX4-204ENST00000473417 TXNL4AP83876 142 aaKnown RBP16.33■□□□□ 0.2
SNX4-204ENST00000473417 KLF10Q13118 480 aa16.33■□□□□ 0.2
SNX4-204ENST00000473417 TESK1Q15569 626 aa16.33■□□□□ 0.2
SNX4-204ENST00000473417 SYPL1Q16563 259 aa16.33■□□□□ 0.2
SNX4-204ENST00000473417 FBXL19-AS1Q494R0 122 aa16.33■□□□□ 0.2
SNX4-204ENST00000473417 KLHL26Q53HC5 615 aa16.33■□□□□ 0.2
SNX4-204ENST00000473417 LRIF1Q5T3J3 769 aa16.33■□□□□ 0.2
SNX4-204ENST00000473417 TYW3Q6IPR3 259 aaKnown RBP16.33■□□□□ 0.2
SNX4-204ENST00000473417 ARSKQ6UWY0 536 aa16.33■□□□□ 0.2
SNX4-204ENST00000473417 MSRB3Q8IXL7 192 aa16.33■□□□□ 0.2
SNX4-204ENST00000473417 MBD3L2Q8NHZ7 208 aaPredicted RBP16.33■□□□□ 0.2
SNX4-204ENST00000473417 PHOSPHO1Q8TCT1 267 aa16.33■□□□□ 0.2
SNX4-204ENST00000473417 SH3YL1Q96HL8 342 aaPredicted RBP16.33■□□□□ 0.2
SNX4-204ENST00000473417 PTGES2Q9H7Z7 377 aa16.33■□□□□ 0.2
SNX4-204ENST00000473417 VAPAQ9P0L0 249 aa16.33■□□□□ 0.2
SNX4-204ENST00000473417 ZNF629Q9UEG4 869 aaPredicted RBP16.33■□□□□ 0.2
SNX4-204ENST00000473417 KCNE5Q9UJ90 142 aa16.33■□□□□ 0.2
SNX4-204ENST00000473417 WDR45Q9Y484 360 aa16.33■□□□□ 0.2
SNX4-204ENST00000473417 DTNAQ9Y4J8 743 aa16.33■□□□□ 0.2
SNX4-204ENST00000473417 IGLV3-32A0A0A0MS00 114 aa16.32■□□□□ 0.2
SNX4-204ENST00000473417 GMNCA6NCL1 334 aa16.32■□□□□ 0.2
SNX4-204ENST00000473417 ZIC3O60481 467 aa16.32■□□□□ 0.2
SNX4-204ENST00000473417 H6PDO95479 791 aa16.32■□□□□ 0.2
SNX4-204ENST00000473417 IL2RAP01589 272 aa16.32■□□□□ 0.2
SNX4-204ENST00000473417 BMP5P22003 454 aa16.32■□□□□ 0.2
SNX4-204ENST00000473417 HPCAP84074 193 aa16.32■□□□□ 0.2
SNX4-204ENST00000473417 CHRNEQ04844 493 aa16.32■□□□□ 0.2
SNX4-204ENST00000473417 C2CD3Q4AC94 2353 aa16.32■□□□□ 0.2
SNX4-204ENST00000473417 PDZK1Q5T2W1 519 aa16.32■□□□□ 0.2
SNX4-204ENST00000473417 FRRS1Q6ZNA5 592 aa16.32■□□□□ 0.2
SNX4-204ENST00000473417 SPATA21Q7Z572 469 aa16.32■□□□□ 0.2
SNX4-204ENST00000473417 HMGN2P46Q86SG4 172 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms