RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 ELOVL5Q9NYP7 299 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 MIS18AQ9NYP9 233 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 RCOR3Q9P2K3 495 aaPredicted RBP2.29□□□□□ -2.04
XRN1-210ENST00000472697 PITPNC1Q9UKF7 332 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 KTN1Q86UP2 1357 aaKnown RBP2.29□□□□□ -2.04
XRN1-210ENST00000472697 TONSLQ96HA7 1378 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 MROH5Q6ZUA9 1318 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 A0A087X1B8 175 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 A0A0J9YVX5 310 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.29□□□□□ -2.04
XRN1-210ENST00000472697 DVL1O14640 695 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 ZBTB5O15062 677 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 PRKNO60260 465 aaPredicted RBP2.29□□□□□ -2.04
XRN1-210ENST00000472697 SLITRK3O94933 977 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 MBP02144 154 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 SLC2A3P11169 496 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 SRMP19623 302 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 DCKP27707 260 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 CEACAM8P31997 349 aaPredicted RBP2.29□□□□□ -2.04
XRN1-210ENST00000472697 RPL4P36578 427 aaKnown RBP2.29□□□□□ -2.04
XRN1-210ENST00000472697 NAMPTP43490 491 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 GABRA6Q16445 453 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 PARP6Q2NL67 630 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 SLC25A52Q3SY17 297 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 SBK1Q52WX2 424 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 FFAR4Q5NUL3 377 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 CARD17Q5XLA6 110 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 TTC23LQ6PF05 361 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 CYP4V2Q6ZWL3 525 aaPredicted RBP2.29□□□□□ -2.04
XRN1-210ENST00000472697 GOLGA7Q7Z5G4 137 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 PRSS35Q8N3Z0 413 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 OR52I1Q8NGK6 324 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 NUDCD2Q8WVJ2 157 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 SPRYD4Q8WW59 207 aaPredicted RBP2.29□□□□□ -2.04
XRN1-210ENST00000472697 DNAAF4Q8WXU2 420 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 ARNTL2Q8WYA1 636 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 ART4Q93070 314 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.29□□□□□ -2.04
XRN1-210ENST00000472697 DNAJA3Q96EY1 480 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 DUX5Q96PT3 197 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 ZNF747Q9BV97 191 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 CHID1Q9BWS9 393 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 GPR174Q9BXC1 333 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 UPF3BQ9BZI7 483 aaKnown RBP2.29□□□□□ -2.04
XRN1-210ENST00000472697 BICC1Q9H694 974 aaKnown RBP2.29□□□□□ -2.04
XRN1-210ENST00000472697 SIX2Q9NPC8 291 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 TCF7L2Q9NQB0 619 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 ANGPTL2Q9UKU9 493 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 NME7Q9Y5B8 376 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 RAB3GAP2Q9H2M9 1393 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 LY6G6EA0A0G2JKS1 128 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 TCP11X1B4DZS4 312 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 MSH4O15457 936 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 SPRY3O43610 288 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 GNA14O95837 355 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 AMD1P17707 334 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 RPL35AP18077 110 aaKnown RBP2.28□□□□□ -2.04
XRN1-210ENST00000472697 MX1P20591 662 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 GSTM3P21266 225 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 CASP14P31944 242 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 P2RY1P47900 373 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 DCDC1P59894 354 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 MYL6P60660 151 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 NOP14P78316 857 aaKnown RBP2.28□□□□□ -2.04
XRN1-210ENST00000472697 CDK16Q00536 496 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 KLC1Q07866 573 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 FOXF2Q12947 444 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 TMEM187Q14656 261 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 SLC17A1Q14916 467 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 WDR43Q15061 677 aaKnown RBP eCLIP2.28□□□□□ -2.04
XRN1-210ENST00000472697 PPP1R3AQ16821 1122 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 EXOC3L2Q2M3D2 409 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 DCAF4L1Q3SXM0 396 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 OTUD1Q5VV17 481 aaPredicted RBP2.28□□□□□ -2.04
XRN1-210ENST00000472697 PLPP4Q5VZY2 271 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 OR52W1Q6IF63 320 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 TRPM8Q7Z2W7 1104 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 TRIM69Q86WT6 500 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 OR2L13Q8N349 312 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 SPERTQ8NA61 448 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 OR5B3Q8NH48 314 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 RHEBL1Q8TAI7 183 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 SMAP2Q8WU79 429 aaPredicted RBP2.28□□□□□ -2.04
XRN1-210ENST00000472697 SORCS1Q8WY21 1168 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 NEUROG1Q92886 237 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 MBOAT4Q96T53 435 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 RAB11FIP5Q9BXF6 653 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 ANKRD60Q9BZ19 345 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 FRMD8P1Q9BZ68 369 aaPredicted RBP2.28□□□□□ -2.04
XRN1-210ENST00000472697 MIS12Q9H081 205 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 BLZF1Q9H2G9 400 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 NARFLQ9H6Q4 476 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 MCCC2Q9HCC0 563 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 S100A14Q9HCY8 104 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 PRSS16Q9NQE7 514 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.28□□□□□ -2.04
XRN1-210ENST00000472697 ZNF490Q9ULM2 529 aaPredicted RBP2.28□□□□□ -2.04
XRN1-210ENST00000472697 SCML1Q9UN30 329 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 PIGLQ9Y2B2 252 aa2.28□□□□□ -2.04
XRN1-210ENST00000472697 EXOSC1Q9Y3B2 195 aaKnown RBP2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms