RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 RFLNBQ8N5W9 214 aa8.25□□□□□ -1.09
VCL-204ENST00000472585 CEP112Q8N8E3 955 aa8.25□□□□□ -1.09
VCL-204ENST00000472585 STEAP2Q8NFT2 490 aa8.25□□□□□ -1.09
VCL-204ENST00000472585 FAM110BQ8TC76 370 aa8.25□□□□□ -1.09
VCL-204ENST00000472585 METTL6Q8TCB7 284 aa8.25□□□□□ -1.09
VCL-204ENST00000472585 RNF128Q8TEB7 428 aa8.25□□□□□ -1.09
VCL-204ENST00000472585 HSD17B8Q92506 261 aa8.25□□□□□ -1.09
VCL-204ENST00000472585 GIMAP5Q96F15 307 aa8.25□□□□□ -1.09
VCL-204ENST00000472585 EGLN2Q96KS0 407 aa8.25□□□□□ -1.09
VCL-204ENST00000472585 BBS4Q96RK4 519 aa8.25□□□□□ -1.09
VCL-204ENST00000472585 MRPL57Q9BQC6 102 aaKnown RBP8.25□□□□□ -1.09
VCL-204ENST00000472585 FUT8Q9BYC5 575 aa8.25□□□□□ -1.09
VCL-204ENST00000472585 GRIP2Q9C0E4 1043 aa8.25□□□□□ -1.09
VCL-204ENST00000472585 ACSS3Q9H6R3 686 aa8.25□□□□□ -1.09
VCL-204ENST00000472585 GLRX2Q9NS18 164 aa8.25□□□□□ -1.09
VCL-204ENST00000472585 NMRK1Q9NWW6 199 aa8.25□□□□□ -1.09
VCL-204ENST00000472585 SIRT5Q9NXA8 310 aa8.25□□□□□ -1.09
VCL-204ENST00000472585 CISD1Q9NZ45 108 aaKnown RBP8.25□□□□□ -1.09
VCL-204ENST00000472585 MCTS1Q9ULC4 181 aaKnown RBP8.25□□□□□ -1.09
VCL-204ENST00000472585 IGHV3-15A0A0B4J1V0 119 aa8.24□□□□□ -1.09
VCL-204ENST00000472585 LOC100289279A0A1B0GTE1 492 aa8.24□□□□□ -1.09
VCL-204ENST00000472585 C7orf72A4D263 438 aa8.24□□□□□ -1.09
VCL-204ENST00000472585 SLC35F4A4IF30 521 aa8.24□□□□□ -1.09
VCL-204ENST00000472585 ELOA3DA6NLF2 546 aaPredicted RBP8.24□□□□□ -1.09
VCL-204ENST00000472585 C9JVG2 144 aa8.24□□□□□ -1.09
VCL-204ENST00000472585 E7EQL1 145 aa8.24□□□□□ -1.09
VCL-204ENST00000472585 ULK1O75385 1050 aa8.24□□□□□ -1.09
VCL-204ENST00000472585 NKX2-2O95096 273 aa8.24□□□□□ -1.09
VCL-204ENST00000472585 SYNGR4O95473 234 aa8.24□□□□□ -1.09
VCL-204ENST00000472585 OXSR1O95747 527 aaPredicted RBP8.24□□□□□ -1.09
VCL-204ENST00000472585 TUBBP07437 444 aa8.24□□□□□ -1.09
VCL-204ENST00000472585 ACP2P11117 423 aa8.24□□□□□ -1.09
VCL-204ENST00000472585 ZNF17P17021 662 aa8.24□□□□□ -1.09
VCL-204ENST00000472585 ENPP1P22413 925 aa8.24□□□□□ -1.09
VCL-204ENST00000472585 SFTPDP35247 375 aa8.24□□□□□ -1.09
VCL-204ENST00000472585 PRIM2P49643 509 aa8.24□□□□□ -1.09
VCL-204ENST00000472585 RNF144AP50876 292 aaPredicted RBP8.24□□□□□ -1.09
VCL-204ENST00000472585 CARD18P57730 90 aa8.24□□□□□ -1.09
VCL-204ENST00000472585 ACSM2AQ08AH3 577 aa8.24□□□□□ -1.09
VCL-204ENST00000472585 HEPACAMQ14CZ8 416 aa8.24□□□□□ -1.09
VCL-204ENST00000472585 RAB35Q15286 201 aa8.24□□□□□ -1.09
VCL-204ENST00000472585 TOMM34Q15785 309 aaPredicted RBP8.24□□□□□ -1.09
VCL-204ENST00000472585 ZNF239Q16600 458 aaKnown RBP8.24□□□□□ -1.09
VCL-204ENST00000472585 ELOA3BQ3SY89 546 aa8.24□□□□□ -1.09
VCL-204ENST00000472585 GLE1Q53GS7 698 aaKnown RBP8.24□□□□□ -1.09
VCL-204ENST00000472585 EXOSC6Q5RKV6 272 aaKnown RBP8.24□□□□□ -1.09
VCL-204ENST00000472585 ZNF678Q5SXM1 525 aa8.24□□□□□ -1.09
VCL-204ENST00000472585 AGAP6Q5VW22 663 aa8.24□□□□□ -1.09
VCL-204ENST00000472585 ACSM2BQ68CK6 577 aa8.24□□□□□ -1.09
VCL-204ENST00000472585 HBMQ6B0K9 141 aa8.24□□□□□ -1.09
VCL-204ENST00000472585 ESPNLQ6ZVH7 1005 aa8.24□□□□□ -1.09
VCL-204ENST00000472585 SAMD14Q8IZD0 417 aaPredicted RBP8.24□□□□□ -1.09
VCL-204ENST00000472585 LILRA2Q8N149 483 aa8.24□□□□□ -1.09
VCL-204ENST00000472585 SLC16A11Q8NCK7 471 aa8.24□□□□□ -1.09
VCL-204ENST00000472585 ELOA3Q8NG57 546 aa8.24□□□□□ -1.09
VCL-204ENST00000472585 FBXO30Q8TB52 745 aa8.24□□□□□ -1.09
VCL-204ENST00000472585 DCAKDQ8WVC6 231 aa8.24□□□□□ -1.09
VCL-204ENST00000472585 FAM168AQ92567 244 aa8.24□□□□□ -1.09
VCL-204ENST00000472585 ZNF75CPQ92670 426 aaPredicted RBP8.24□□□□□ -1.09
VCL-204ENST00000472585 C16orf58Q96GQ5 468 aa8.24□□□□□ -1.09
VCL-204ENST00000472585 SH3YL1Q96HL8 342 aaPredicted RBP8.24□□□□□ -1.09
VCL-204ENST00000472585 TMEM237Q96Q45 408 aa8.24□□□□□ -1.09
VCL-204ENST00000472585 ZNF382Q96SR6 550 aa8.24□□□□□ -1.09
VCL-204ENST00000472585 HDHD5Q9BXW7 423 aa8.24□□□□□ -1.09
VCL-204ENST00000472585 TBL1XR1Q9BZK7 514 aa8.24□□□□□ -1.09
VCL-204ENST00000472585 MRPL46Q9H2W6 279 aaKnown RBP8.24□□□□□ -1.09
VCL-204ENST00000472585 CXorf36Q9H7Y0 433 aa8.24□□□□□ -1.09
VCL-204ENST00000472585 MANSC1Q9H8J5 431 aa8.24□□□□□ -1.09
VCL-204ENST00000472585 COQ10BQ9H8M1 238 aa8.24□□□□□ -1.09
VCL-204ENST00000472585 Q9N2J8 555 aa8.24□□□□□ -1.09
VCL-204ENST00000472585 TNFRSF12AQ9NP84 129 aa8.24□□□□□ -1.09
VCL-204ENST00000472585 TMEM216Q9P0N5 145 aa8.24□□□□□ -1.09
VCL-204ENST00000472585 PRSS50Q9UI38 385 aa8.24□□□□□ -1.09
VCL-204ENST00000472585 TMCO1Q9UM00 188 aa8.24□□□□□ -1.09
VCL-204ENST00000472585 PLCE1Q9P212 2302 aa8.24□□□□□ -1.09
VCL-204ENST00000472585 A0A087WZY1 265 aa8.23□□□□□ -1.09
VCL-204ENST00000472585 SERTM1A2A2V5 107 aa8.23□□□□□ -1.09
VCL-204ENST00000472585 TRIM49D1C9J1S8 452 aa8.23□□□□□ -1.09
VCL-204ENST00000472585 NDUFB5O43674 189 aa8.23□□□□□ -1.09
VCL-204ENST00000472585 COQ9O75208 318 aa8.23□□□□□ -1.09
VCL-204ENST00000472585 LYZL6O75951 148 aa8.23□□□□□ -1.09
VCL-204ENST00000472585 SUPT7LO94864 414 aa8.23□□□□□ -1.09
VCL-204ENST00000472585 KRT6AP02538 564 aa8.23□□□□□ -1.09
VCL-204ENST00000472585 KRT6BP04259 564 aa8.23□□□□□ -1.09
VCL-204ENST00000472585 EGR1P18146 543 aa8.23□□□□□ -1.09
VCL-204ENST00000472585 USF1P22415 310 aaPredicted RBP8.23□□□□□ -1.09
VCL-204ENST00000472585 IL32P24001 234 aa8.23□□□□□ -1.09
VCL-204ENST00000472585 NTF4P34130 210 aa8.23□□□□□ -1.09
VCL-204ENST00000472585 KRT6CP48668 564 aa8.23□□□□□ -1.09
VCL-204ENST00000472585 RELBQ01201 579 aa8.23□□□□□ -1.09
VCL-204ENST00000472585 CAV1Q03135 178 aa8.23□□□□□ -1.09
VCL-204ENST00000472585 SPOCK1Q08629 439 aa8.23□□□□□ -1.09
VCL-204ENST00000472585 ITGADQ13349 1161 aa8.23□□□□□ -1.09
VCL-204ENST00000472585 P2RY6Q15077 328 aa8.23□□□□□ -1.09
VCL-204ENST00000472585 RASA2Q15283 850 aa8.23□□□□□ -1.09
VCL-204ENST00000472585 ZNF385BQ569K4 471 aa8.23□□□□□ -1.09
VCL-204ENST00000472585 SPIN4Q56A73 249 aa8.23□□□□□ -1.09
VCL-204ENST00000472585 ANKRD26P1Q6NSI1 321 aa8.23□□□□□ -1.09
VCL-204ENST00000472585 CBLN3Q6UW01 205 aa8.23□□□□□ -1.09
VCL-204ENST00000472585 B3GLCTQ6Y288 498 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms