RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 FUT5Q11128 374 aa8.32□□□□□ -1.08
SMC4-213ENST00000472282 NFYCQ13952 458 aa8.32□□□□□ -1.08
SMC4-213ENST00000472282 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.32□□□□□ -1.084e-9■■■■■ 118.1
SMC4-213ENST00000472282 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.32□□□□□ -1.081e-13■■■■■ 65.9
SMC4-213ENST00000472282 REP15Q6BDI9 236 aa8.32□□□□□ -1.08
SMC4-213ENST00000472282 OLIG3Q7RTU3 272 aa8.32□□□□□ -1.08
SMC4-213ENST00000472282 GDF7Q7Z4P5 450 aa8.32□□□□□ -1.08
SMC4-213ENST00000472282 CCDC71Q8IV32 467 aaPredicted RBP8.32□□□□□ -1.08
SMC4-213ENST00000472282 DPP10Q8N608 796 aa8.32□□□□□ -1.08
SMC4-213ENST00000472282 ACBD4Q8NC06 268 aa8.32□□□□□ -1.08
SMC4-213ENST00000472282 OR5M9Q8NGP3 310 aa8.32□□□□□ -1.08
SMC4-213ENST00000472282 FAM110BQ8TC76 370 aa8.32□□□□□ -1.08
SMC4-213ENST00000472282 XAGE5Q8WWM1 108 aa8.32□□□□□ -1.08
SMC4-213ENST00000472282 TMCO6Q96DC7 493 aa8.32□□□□□ -1.08
SMC4-213ENST00000472282 LURAP1Q96LR2 239 aa8.32□□□□□ -1.08
SMC4-213ENST00000472282 SECISBP2Q96T21 854 aaKnown RBP8.32□□□□□ -1.08
SMC4-213ENST00000472282 FAM173AQ9BQD7 235 aa8.32□□□□□ -1.08
SMC4-213ENST00000472282 DOHHQ9BU89 302 aa8.32□□□□□ -1.08
SMC4-213ENST00000472282 CCDC106Q9BWC9 280 aa8.32□□□□□ -1.08
SMC4-213ENST00000472282 OSBPL11Q9BXB4 747 aa8.32□□□□□ -1.08
SMC4-213ENST00000472282 UCK2Q9BZX2 261 aa8.32□□□□□ -1.08
SMC4-213ENST00000472282 MYLK2Q9H1R3 596 aa8.32□□□□□ -1.08
SMC4-213ENST00000472282 METTL7AQ9H8H3 244 aa8.32□□□□□ -1.08
SMC4-213ENST00000472282 IL1RL2Q9HB29 575 aa8.32□□□□□ -1.08
SMC4-213ENST00000472282 EXD2Q9NVH0 621 aa8.32□□□□□ -1.08
SMC4-213ENST00000472282 GIN1Q9NXP7 522 aa8.32□□□□□ -1.08
SMC4-213ENST00000472282 KLRF1Q9NZS2 232 aa8.32□□□□□ -1.08
SMC4-213ENST00000472282 STOML1Q9UBI4 398 aa8.32□□□□□ -1.08
SMC4-213ENST00000472282 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.32□□□□□ -1.08
SMC4-213ENST00000472282 RNF6Q9Y252 685 aa8.32□□□□□ -1.08
SMC4-213ENST00000472282 ARL2BPQ9Y2Y0 163 aa8.32□□□□□ -1.08
SMC4-213ENST00000472282 PCDHGB3Q9Y5G1 929 aa8.32□□□□□ -1.08
SMC4-213ENST00000472282 PDZD2O15018 2839 aa8.32□□□□□ -1.08
SMC4-213ENST00000472282 NOTCH2Q04721 2471 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 NPIPA5A0A0B4J1W7 369 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 LOC100653049A0A140TA62 436 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 LRRC3CA6NJW4 275 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 DUXAA6NLW8 204 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 FAM90A27PA6NNH2 459 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 ENO4A6NNW6 628 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 BBIP1A8MTZ0 92 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 NPIPA7E9PJI5 369 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 ACOT7O00154 380 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 CLIC1O00299 241 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 HMGN4O00479 90 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 MRASO14807 208 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 KRT34O76011 436 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 UTS2O95399 124 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 AGR2O95994 175 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 AK1P00568 194 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 IGLV1-40P01703 118 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 IGHG3P01860 377 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 NPIPA8P0DM63 369 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 COX4I1P13073 169 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 ETFAP13804 333 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 POU3F2P20265 443 aaPredicted RBP8.31□□□□□ -1.08
SMC4-213ENST00000472282 ATP6V1C1P21283 382 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 EVI2BP34910 448 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 PTGER4P35408 488 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 PTGDSP41222 190 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 CRATP43155 626 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 MASP1P48740 699 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 CYLC2Q14093 348 aaPredicted RBP8.31□□□□□ -1.08
SMC4-213ENST00000472282 TRMT5Q32P41 509 aaKnown RBP8.31□□□□□ -1.08
SMC4-213ENST00000472282 GRAMD1BQ3KR37 738 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 MMEL1Q495T6 779 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 GXYLT1Q4G148 440 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 ATAD3BQ5T9A4 648 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 GKAP1Q5VSY0 366 aaPredicted RBP8.31□□□□□ -1.08
SMC4-213ENST00000472282 RTL6Q6ICC9 239 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 HEPHL1Q6MZM0 1159 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 ARHGAP11AQ6P4F7 1023 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 TMEM81Q6P7N7 255 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 DLEU7Q6UYE1 221 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 TRILQ7L0X0 811 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.31□□□□□ -1.08
SMC4-213ENST00000472282 C16orf62Q7Z3J2 963 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 FAM109AQ8N4B1 249 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 CHDHQ8NE62 594 aaPredicted RBP8.31□□□□□ -1.08
SMC4-213ENST00000472282 RNF138Q8WVD3 245 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 RCN3Q96D15 328 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 ZNF597Q96LX8 424 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 JSRP1Q96MG2 331 aaPredicted RBP8.31□□□□□ -1.08
SMC4-213ENST00000472282 SDF2Q99470 211 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 CGREF1Q99674 301 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 G6PC3Q9BUM1 346 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 ANGPTL4Q9BY76 406 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 KRTAP4-9Q9BYQ8 210 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 ENKD1Q9H0I2 346 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 TP63Q9H3D4 680 aaPredicted RBP8.31□□□□□ -1.08
SMC4-213ENST00000472282 RAD21L1Q9H4I0 556 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 IKZF5Q9H5V7 419 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 GALNT9Q9HCQ5 603 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 SPRR3Q9UBC9 169 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 BOKQ9UMX3 212 aaPredicted RBP8.31□□□□□ -1.08
SMC4-213ENST00000472282 FAM215AQ9Y5M1 114 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.31□□□□□ -1.08
SMC4-213ENST00000472282 CREBBPQ92793 2442 aa8.31□□□□□ -1.08
SMC4-213ENST00000472282 DOCK7Q96N67 2140 aa8.3□□□□□ -1.08
SMC4-213ENST00000472282 A0A1B0GVC2 190 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms