RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 OXSR1O95747 527 aaPredicted RBP16.74■□□□□ 0.27
SORT1-203ENST00000471996 NGFRP08138 427 aa16.74■□□□□ 0.27
SORT1-203ENST00000471996 LINGO3P0C6S8 592 aa16.74■□□□□ 0.27
SORT1-203ENST00000471996 HSD3B1P14060 373 aa16.74■□□□□ 0.27
SORT1-203ENST00000471996 CD40P25942 277 aa16.74■□□□□ 0.27
SORT1-203ENST00000471996 HSD3B2P26439 372 aa16.74■□□□□ 0.27
SORT1-203ENST00000471996 EIF1P41567 113 aaKnown RBP16.74■□□□□ 0.27
SORT1-203ENST00000471996 CHRNB3Q05901 458 aa16.74■□□□□ 0.27
SORT1-203ENST00000471996 NAB1Q13506 487 aa16.74■□□□□ 0.27
SORT1-203ENST00000471996 PRSS53Q2L4Q9 553 aa16.74■□□□□ 0.27
SORT1-203ENST00000471996 RPS27LQ71UM5 84 aaKnown RBP16.74■□□□□ 0.27
SORT1-203ENST00000471996 GATSQ8NAP1 163 aa16.74■□□□□ 0.27
SORT1-203ENST00000471996 FAM110BQ8TC76 370 aa16.74■□□□□ 0.27
SORT1-203ENST00000471996 INPP5KQ9BT40 448 aa16.74■□□□□ 0.27
SORT1-203ENST00000471996 CXorf36Q9H7Y0 433 aa16.74■□□□□ 0.27
SORT1-203ENST00000471996 KLHL9Q9P2J3 617 aa16.74■□□□□ 0.27
SORT1-203ENST00000471996 NFU1Q9UMS0 254 aa16.74■□□□□ 0.27
SORT1-203ENST00000471996 TTC36A6NLP5 189 aa16.73■□□□□ 0.27
SORT1-203ENST00000471996 EFNA2O43921 213 aa16.73■□□□□ 0.27
SORT1-203ENST00000471996 CHN1P15882 459 aa16.73■□□□□ 0.27
SORT1-203ENST00000471996 ENPP1P22413 925 aa16.73■□□□□ 0.27
SORT1-203ENST00000471996 EDNRAP25101 427 aa16.73■□□□□ 0.27
SORT1-203ENST00000471996 ELK4P28324 431 aa16.73■□□□□ 0.27
SORT1-203ENST00000471996 ZNF83P51522 516 aa16.73■□□□□ 0.27
SORT1-203ENST00000471996 SLC29A2Q14542 456 aa16.73■□□□□ 0.27
SORT1-203ENST00000471996 GLE1Q53GS7 698 aaKnown RBP16.73■□□□□ 0.27
SORT1-203ENST00000471996 ARL13AQ5H913 290 aaPredicted RBP16.73■□□□□ 0.27
SORT1-203ENST00000471996 KLHL17Q6TDP4 642 aa16.73■□□□□ 0.27
SORT1-203ENST00000471996 FBF1Q8TES7 1133 aa16.73■□□□□ 0.27
SORT1-203ENST00000471996 PIK3R3Q92569 461 aa16.73■□□□□ 0.27
SORT1-203ENST00000471996 ELP4Q96EB1 424 aa16.73■□□□□ 0.27
SORT1-203ENST00000471996 SH3YL1Q96HL8 342 aaPredicted RBP16.73■□□□□ 0.27
SORT1-203ENST00000471996 PSD2Q9BQI7 771 aa16.73■□□□□ 0.27
SORT1-203ENST00000471996 RNF14Q9UBS8 474 aa16.73■□□□□ 0.27
SORT1-203ENST00000471996 ZNF225Q9UK10 706 aa16.73■□□□□ 0.27
SORT1-203ENST00000471996 TENM1Q9UKZ4 2725 aa16.73■□□□□ 0.27
SORT1-203ENST00000471996 MGAM2Q2M2H8 2515 aa16.72■□□□□ 0.27
SORT1-203ENST00000471996 PLCE1Q9P212 2302 aa16.72■□□□□ 0.27
SORT1-203ENST00000471996 GJE1A6NN92 205 aa16.72■□□□□ 0.27
SORT1-203ENST00000471996 RGS14O43566 566 aa16.72■□□□□ 0.27
SORT1-203ENST00000471996 RPS17P08708 135 aaKnown RBP16.72■□□□□ 0.27
SORT1-203ENST00000471996 RBP1P09455 135 aa16.72■□□□□ 0.27
SORT1-203ENST00000471996 TCP1P17987 556 aaKnown RBP16.72■□□□□ 0.27
SORT1-203ENST00000471996 DDCP20711 480 aa16.72■□□□□ 0.27
SORT1-203ENST00000471996 STX2P32856 288 aa16.72■□□□□ 0.27
SORT1-203ENST00000471996 CDH13P55290 713 aa16.72■□□□□ 0.27
SORT1-203ENST00000471996 FOXF1Q12946 379 aa16.72■□□□□ 0.27
SORT1-203ENST00000471996 TMEM176BQ3YBM2 270 aaPredicted RBP16.72■□□□□ 0.27
SORT1-203ENST00000471996 PLD6Q8N2A8 252 aaKnown RBP16.72■□□□□ 0.27
SORT1-203ENST00000471996 ZNF433Q8N7K0 673 aaPredicted RBP16.72■□□□□ 0.27
SORT1-203ENST00000471996 ZNF483Q8TF39 744 aaPredicted RBP16.72■□□□□ 0.27
SORT1-203ENST00000471996 GLIPR2Q9H4G4 154 aa16.72■□□□□ 0.27
SORT1-203ENST00000471996 COQ10BQ9H8M1 238 aa16.72■□□□□ 0.27
SORT1-203ENST00000471996 GRID1Q9ULK0 1009 aa16.72■□□□□ 0.27
SORT1-203ENST00000471996 SLC25A15Q9Y619 301 aa16.72■□□□□ 0.27
SORT1-203ENST00000471996 IGHV3-15A0A0B4J1V0 119 aa16.71■□□□□ 0.27
SORT1-203ENST00000471996 MANBAO00462 879 aa16.71■□□□□ 0.27
SORT1-203ENST00000471996 ZNF195O14628 629 aa16.71■□□□□ 0.27
SORT1-203ENST00000471996 SMAD9O15198 467 aaKnown RBP16.71■□□□□ 0.27
SORT1-203ENST00000471996 SMIM24O75264 130 aa16.71■□□□□ 0.27
SORT1-203ENST00000471996 ZNF23P17027 643 aa16.71■□□□□ 0.27
SORT1-203ENST00000471996 TSPAN8P19075 237 aa16.71■□□□□ 0.27
SORT1-203ENST00000471996 TYK2P29597 1187 aa16.71■□□□□ 0.27
SORT1-203ENST00000471996 TIA1P31483 386 aaKnown RBP eCLIP16.71■□□□□ 0.27
SORT1-203ENST00000471996 SRP14P37108 136 aaKnown RBP16.71■□□□□ 0.27
SORT1-203ENST00000471996 GSTM5P46439 218 aa16.71■□□□□ 0.27
SORT1-203ENST00000471996 COMPP49747 757 aaPredicted RBP16.71■□□□□ 0.27
SORT1-203ENST00000471996 SPIN4Q56A73 249 aa16.71■□□□□ 0.27
SORT1-203ENST00000471996 GALNT18Q6P9A2 607 aa16.71■□□□□ 0.27
SORT1-203ENST00000471996 MISPQ8IVT2 679 aa16.71■□□□□ 0.27
SORT1-203ENST00000471996 OR52N5Q8NH56 324 aa16.71■□□□□ 0.27
SORT1-203ENST00000471996 B4GALNT2Q8NHY0 566 aa16.71■□□□□ 0.27
SORT1-203ENST00000471996 GPR151Q8TDV0 419 aa16.71■□□□□ 0.27
SORT1-203ENST00000471996 ZFAND2BQ8WV99 257 aa16.71■□□□□ 0.27
SORT1-203ENST00000471996 APIPQ96GX9 242 aa16.71■□□□□ 0.27
SORT1-203ENST00000471996 FOXN4Q96NZ1 517 aa16.71■□□□□ 0.27
SORT1-203ENST00000471996 SOX7Q9BT81 388 aa16.71■□□□□ 0.27
SORT1-203ENST00000471996 VPS11Q9H270 941 aa16.71■□□□□ 0.27
SORT1-203ENST00000471996 FKBP7Q9Y680 259 aa16.71■□□□□ 0.27
SORT1-203ENST00000471996 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.71■□□□□ 0.27
SORT1-203ENST00000471996 LOC390937A0A1W2PQ73 354 aa16.7■□□□□ 0.26
SORT1-203ENST00000471996 C9JVG2 144 aa16.7■□□□□ 0.26
SORT1-203ENST00000471996 RAD51DO75771 328 aa16.7■□□□□ 0.26
SORT1-203ENST00000471996 OR4F21O95013 312 aa16.7■□□□□ 0.26
SORT1-203ENST00000471996 VENTXO95231 258 aa16.7■□□□□ 0.26
SORT1-203ENST00000471996 KRT6AP02538 564 aa16.7■□□□□ 0.26
SORT1-203ENST00000471996 KRT6BP04259 564 aa16.7■□□□□ 0.26
SORT1-203ENST00000471996 APOBEC3AP31941 199 aaPredicted RBP16.7■□□□□ 0.26
SORT1-203ENST00000471996 MAP3K8P41279 467 aa16.7■□□□□ 0.26
SORT1-203ENST00000471996 KRT6CP48668 564 aa16.7■□□□□ 0.26
SORT1-203ENST00000471996 PRIM2P49643 509 aa16.7■□□□□ 0.26
SORT1-203ENST00000471996 CHRNEQ04844 493 aa16.7■□□□□ 0.26
SORT1-203ENST00000471996 ACSM2AQ08AH3 577 aa16.7■□□□□ 0.26
SORT1-203ENST00000471996 RASGEF1BQ0VAM2 473 aa16.7■□□□□ 0.26
SORT1-203ENST00000471996 CALCOCO2Q13137 446 aa16.7■□□□□ 0.26
SORT1-203ENST00000471996 IQCCQ4KMZ1 466 aa16.7■□□□□ 0.26
SORT1-203ENST00000471996 ACSM2BQ68CK6 577 aa16.7■□□□□ 0.26
SORT1-203ENST00000471996 CREG2Q8IUH2 290 aa16.7■□□□□ 0.26
SORT1-203ENST00000471996 ZFP90Q8TF47 636 aa16.7■□□□□ 0.26
SORT1-203ENST00000471996 HOXB13Q92826 284 aaPredicted RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms