RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 TNFRSF21O75509 655 aa12.2□□□□□ -0.46
HMGN1-211ENST00000471260 UTS2O95399 124 aa12.2□□□□□ -0.46
HMGN1-211ENST00000471260 EPXP11678 715 aa12.2□□□□□ -0.46
HMGN1-211ENST00000471260 CD1EP15812 388 aa12.2□□□□□ -0.46
HMGN1-211ENST00000471260 HK1P19367 917 aa12.2□□□□□ -0.46
HMGN1-211ENST00000471260 HPCAL1P37235 193 aa12.2□□□□□ -0.46
HMGN1-211ENST00000471260 PCYT1AP49585 367 aa12.2□□□□□ -0.46
HMGN1-211ENST00000471260 PRIM2P49643 509 aa12.2□□□□□ -0.46
HMGN1-211ENST00000471260 DIO3P55073 304 aa12.2□□□□□ -0.46
HMGN1-211ENST00000471260 MAPRE2Q15555 327 aa12.2□□□□□ -0.46
HMGN1-211ENST00000471260 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.2□□□□□ -0.46
HMGN1-211ENST00000471260 ANKRD26P1Q6NSI1 321 aa12.2□□□□□ -0.46
HMGN1-211ENST00000471260 GRAMD2AQ8IUY3 354 aa12.2□□□□□ -0.46
HMGN1-211ENST00000471260 ZNF781Q8N8C0 355 aa12.2□□□□□ -0.46
HMGN1-211ENST00000471260 FAM110BQ8TC76 370 aa12.2□□□□□ -0.46
HMGN1-211ENST00000471260 GPR151Q8TDV0 419 aa12.2□□□□□ -0.46
HMGN1-211ENST00000471260 NRG4Q8WWG1 115 aa12.2□□□□□ -0.46
HMGN1-211ENST00000471260 GIMAP5Q96F15 307 aa12.2□□□□□ -0.46
HMGN1-211ENST00000471260 PRPF18Q99633 342 aaKnown RBP12.2□□□□□ -0.46
HMGN1-211ENST00000471260 ECSITQ9BQ95 431 aa12.2□□□□□ -0.46
HMGN1-211ENST00000471260 POLDIP3Q9BY77 421 aaKnown RBP12.2□□□□□ -0.46
HMGN1-211ENST00000471260 ZNF395Q9H8N7 513 aaPredicted RBP12.2□□□□□ -0.46
HMGN1-211ENST00000471260 EQTNQ9NQ60 294 aa12.2□□□□□ -0.46
HMGN1-211ENST00000471260 ATAD3AQ9NVI7 634 aa12.2□□□□□ -0.46
HMGN1-211ENST00000471260 PNPOQ9NVS9 261 aa12.2□□□□□ -0.46
HMGN1-211ENST00000471260 GIN1Q9NXP7 522 aa12.2□□□□□ -0.46
HMGN1-211ENST00000471260 MED11Q9P086 117 aa12.2□□□□□ -0.46
HMGN1-211ENST00000471260 C6orf203Q9P0P8 240 aaPredicted RBP12.2□□□□□ -0.46
HMGN1-211ENST00000471260 KIAA1549Q9HCM3 1950 aa12.19□□□□□ -0.46
HMGN1-211ENST00000471260 A6NNC1 897 aa12.19□□□□□ -0.46
HMGN1-211ENST00000471260 TMEM233B4DJY2 109 aa12.19□□□□□ -0.46
HMGN1-211ENST00000471260 SCAMP2O15127 329 aaKnown RBP12.19□□□□□ -0.46
HMGN1-211ENST00000471260 ANGPTL1O95841 491 aa12.19□□□□□ -0.46
HMGN1-211ENST00000471260 TBXA2RP21731 343 aa12.19□□□□□ -0.46
HMGN1-211ENST00000471260 DNAJA1P31689 397 aaKnown RBP12.19□□□□□ -0.46
HMGN1-211ENST00000471260 ARRB2P32121 409 aa12.19□□□□□ -0.46
HMGN1-211ENST00000471260 RFX3P48380 749 aa12.19□□□□□ -0.46
HMGN1-211ENST00000471260 AGFG1P52594 562 aaKnown RBP12.19□□□□□ -0.46
HMGN1-211ENST00000471260 PRKAG1P54619 331 aa12.19□□□□□ -0.46
HMGN1-211ENST00000471260 FOXF2Q12947 444 aa12.19□□□□□ -0.46
HMGN1-211ENST00000471260 MAD2L1Q13257 205 aaPredicted RBP12.19□□□□□ -0.46
HMGN1-211ENST00000471260 RAET1LQ5VY80 246 aa12.19□□□□□ -0.46
HMGN1-211ENST00000471260 MFSD12Q6NUT3 480 aa12.19□□□□□ -0.46
HMGN1-211ENST00000471260 MARCH3Q86UD3 253 aa12.19□□□□□ -0.46
HMGN1-211ENST00000471260 MISPQ8IVT2 679 aa12.19□□□□□ -0.46
HMGN1-211ENST00000471260 CLHC1Q8NHS4 586 aa12.19□□□□□ -0.46
HMGN1-211ENST00000471260 FBXO27Q8NI29 283 aa12.19□□□□□ -0.46
HMGN1-211ENST00000471260 PIK3R3Q92569 461 aa12.19□□□□□ -0.46
HMGN1-211ENST00000471260 SLC9A6Q92581 669 aa12.19□□□□□ -0.46
HMGN1-211ENST00000471260 INTS12Q96CB8 462 aaKnown RBP12.19□□□□□ -0.46
HMGN1-211ENST00000471260 SPDL1Q96EA4 605 aa12.19□□□□□ -0.46
HMGN1-211ENST00000471260 C1GALT1C1Q96EU7 318 aa12.19□□□□□ -0.46
HMGN1-211ENST00000471260 RMND5BQ96G75 393 aaPredicted RBP12.19□□□□□ -0.46
HMGN1-211ENST00000471260 MAELQ96JY0 434 aaKnown RBP12.19□□□□□ -0.46
HMGN1-211ENST00000471260 RBM24Q9BX46 236 aaKnown RBP12.19□□□□□ -0.46
HMGN1-211ENST00000471260 RTN4RQ9BZR6 473 aa12.19□□□□□ -0.46
HMGN1-211ENST00000471260 CLEC4MQ9H2X3 399 aaPredicted RBP12.19□□□□□ -0.46
HMGN1-211ENST00000471260 DUSP22Q9NRW4 184 aa12.19□□□□□ -0.46
HMGN1-211ENST00000471260 FLRT3Q9NZU0 649 aa12.19□□□□□ -0.46
HMGN1-211ENST00000471260 AP4B1Q9Y6B7 739 aa12.19□□□□□ -0.46
HMGN1-211ENST00000471260 ANKRD17O75179 2603 aaKnown RBP12.19□□□□□ -0.46
HMGN1-211ENST00000471260 MPDZO75970 2070 aa12.18□□□□□ -0.46
HMGN1-211ENST00000471260 F8P00451 2351 aa12.18□□□□□ -0.46
HMGN1-211ENST00000471260 A0A087WZY1 265 aa12.18□□□□□ -0.46
HMGN1-211ENST00000471260 A0A1W2PRB8 838 aa12.18□□□□□ -0.46
HMGN1-211ENST00000471260 GXYLT2A0PJZ3 443 aa12.18□□□□□ -0.46
HMGN1-211ENST00000471260 SLC22A20A6NK97 555 aa12.18□□□□□ -0.46
HMGN1-211ENST00000471260 MSTNO14793 375 aa12.18□□□□□ -0.46
HMGN1-211ENST00000471260 NDUFB5O43674 189 aa12.18□□□□□ -0.46
HMGN1-211ENST00000471260 KCNK2O95069 426 aa12.18□□□□□ -0.46
HMGN1-211ENST00000471260 ALOX5P09917 674 aa12.18□□□□□ -0.46
HMGN1-211ENST00000471260 RPS3AP61247 264 aaKnown RBP12.18□□□□□ -0.46
HMGN1-211ENST00000471260 STX5Q13190 355 aa12.18□□□□□ -0.46
HMGN1-211ENST00000471260 FGFBP1Q14512 234 aa12.18□□□□□ -0.46
HMGN1-211ENST00000471260 TMEM44Q2T9K0 475 aa12.18□□□□□ -0.46
HMGN1-211ENST00000471260 SMU1Q2TAY7 513 aa12.18□□□□□ -0.46
HMGN1-211ENST00000471260 GRAMD1BQ3KR37 738 aa12.18□□□□□ -0.46
HMGN1-211ENST00000471260 LSM12Q3MHD2 195 aaKnown RBP12.18□□□□□ -0.46
HMGN1-211ENST00000471260 EXOSC6Q5RKV6 272 aaKnown RBP12.18□□□□□ -0.46
HMGN1-211ENST00000471260 C6orf136Q5SQH8 315 aa12.18□□□□□ -0.46
HMGN1-211ENST00000471260 APOOLQ6UXV4 268 aa12.18□□□□□ -0.46
HMGN1-211ENST00000471260 SZRD1Q7Z422 152 aa12.18□□□□□ -0.46
HMGN1-211ENST00000471260 P4HA3Q7Z4N8 544 aa12.18□□□□□ -0.46
HMGN1-211ENST00000471260 MED12LQ86YW9 2145 aa12.18□□□□□ -0.46
HMGN1-211ENST00000471260 PGAM4Q8N0Y7 254 aa12.18□□□□□ -0.46
HMGN1-211ENST00000471260 SLC16A11Q8NCK7 471 aa12.18□□□□□ -0.46
HMGN1-211ENST00000471260 PSMA8Q8TAA3 256 aa12.18□□□□□ -0.46
HMGN1-211ENST00000471260 OR5P2Q8WZ92 322 aa12.18□□□□□ -0.46
HMGN1-211ENST00000471260 COQ8BQ96D53 544 aa12.18□□□□□ -0.46
HMGN1-211ENST00000471260 FAM120BQ96EK7 910 aaKnown RBP12.18□□□□□ -0.46
HMGN1-211ENST00000471260 DACH2Q96NX9 599 aa12.18□□□□□ -0.46
HMGN1-211ENST00000471260 STACQ99469 402 aa12.18□□□□□ -0.46
HMGN1-211ENST00000471260 GPATCH1Q9BRR8 931 aaKnown RBP12.18□□□□□ -0.46
HMGN1-211ENST00000471260 NEUROD4Q9HD90 331 aa12.18□□□□□ -0.46
HMGN1-211ENST00000471260 UBQLN4Q9NRR5 601 aa12.18□□□□□ -0.46
HMGN1-211ENST00000471260 SIRT3Q9NTG7 399 aaPredicted RBP12.18□□□□□ -0.46
HMGN1-211ENST00000471260 PAQR5Q9NXK6 330 aaPredicted RBP12.18□□□□□ -0.46
HMGN1-211ENST00000471260 ZDHHC2Q9UIJ5 367 aa12.18□□□□□ -0.46
HMGN1-211ENST00000471260 PACSIN3Q9UKS6 424 aa12.18□□□□□ -0.46
HMGN1-211ENST00000471260 POMPQ9Y244 141 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms