RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 TXNL4AP83876 142 aaKnown RBP8.24□□□□□ -1.09
SF3A1-206ENST00000471037 FADDQ13158 208 aa8.24□□□□□ -1.09
SF3A1-206ENST00000471037 LTB4RQ15722 352 aa8.24□□□□□ -1.09
SF3A1-206ENST00000471037 GTDC1Q4AE62 458 aa8.24□□□□□ -1.09
SF3A1-206ENST00000471037 SAMD4BQ5PRF9 694 aaKnown RBP8.24□□□□□ -1.09
SF3A1-206ENST00000471037 FBXW10Q5XX13 1052 aa8.24□□□□□ -1.09
SF3A1-206ENST00000471037 SAXO2Q658L1 398 aa8.24□□□□□ -1.09
SF3A1-206ENST00000471037 BICRALQ6AI39 1079 aa8.24□□□□□ -1.09
SF3A1-206ENST00000471037 TMEM107Q6UX40 140 aa8.24□□□□□ -1.09
SF3A1-206ENST00000471037 PACS2Q86VP3 889 aa8.24□□□□□ -1.09
SF3A1-206ENST00000471037 GALNT12Q8IXK2 581 aa8.24□□□□□ -1.09
SF3A1-206ENST00000471037 SLC15A3Q8IY34 581 aa8.24□□□□□ -1.09
SF3A1-206ENST00000471037 OR2L13Q8N349 312 aa8.24□□□□□ -1.09
SF3A1-206ENST00000471037 VWA5B2Q8N398 1253 aa8.24□□□□□ -1.09
SF3A1-206ENST00000471037 C17orf47Q8NEP4 570 aa8.24□□□□□ -1.09
SF3A1-206ENST00000471037 ADCY4Q8NFM4 1077 aa8.24□□□□□ -1.09
SF3A1-206ENST00000471037 LINC01560Q8TB33 94 aa8.24□□□□□ -1.09
SF3A1-206ENST00000471037 CTHRC1Q96CG8 243 aa8.24□□□□□ -1.09
SF3A1-206ENST00000471037 NEURL3Q96EH8 262 aa8.24□□□□□ -1.09
SF3A1-206ENST00000471037 FAM120BQ96EK7 910 aaKnown RBP8.24□□□□□ -1.09
SF3A1-206ENST00000471037 AURKBQ96GD4 344 aaPredicted RBP8.24□□□□□ -1.09
SF3A1-206ENST00000471037 WDYHV1Q96HA8 205 aa8.24□□□□□ -1.09
SF3A1-206ENST00000471037 TMEM41AQ96HV5 264 aa8.24□□□□□ -1.09
SF3A1-206ENST00000471037 MS4A4EQ96PG1 132 aa8.24□□□□□ -1.09
SF3A1-206ENST00000471037 RAB3IPQ96QF0 476 aaPredicted RBP8.24□□□□□ -1.09
SF3A1-206ENST00000471037 THTPAQ9BU02 230 aa8.24□□□□□ -1.09
SF3A1-206ENST00000471037 UGT2B28Q9BY64 529 aa8.24□□□□□ -1.09
SF3A1-206ENST00000471037 CADM1Q9BY67 442 aaKnown RBP8.24□□□□□ -1.09
SF3A1-206ENST00000471037 CALHM2Q9HA72 323 aa8.24□□□□□ -1.09
SF3A1-206ENST00000471037 ZCCHC3Q9NUD5 404 aaKnown RBP8.24□□□□□ -1.09
SF3A1-206ENST00000471037 DDX18Q9NVP1 670 aaKnown RBP8.24□□□□□ -1.09
SF3A1-206ENST00000471037 BEX4Q9NWD9 120 aaPredicted RBP8.24□□□□□ -1.09
SF3A1-206ENST00000471037 ADA2Q9NZK5 511 aa8.24□□□□□ -1.09
SF3A1-206ENST00000471037 MAT2BQ9NZL9 334 aa8.24□□□□□ -1.09
SF3A1-206ENST00000471037 TMEM181Q9P2C4 612 aa8.24□□□□□ -1.09
SF3A1-206ENST00000471037 NPFFR2Q9Y5X5 522 aa8.24□□□□□ -1.09
SF3A1-206ENST00000471037 NSD1Q96L73 2696 aaPredicted RBP8.24□□□□□ -1.09
SF3A1-206ENST00000471037 A0A1W2PPR1 153 aa8.23□□□□□ -1.09
SF3A1-206ENST00000471037 CFAP73A6NFT4 308 aa8.23□□□□□ -1.09
SF3A1-206ENST00000471037 EEF1E1-BLOC1S5C9J1V9 151 aa8.23□□□□□ -1.09
SF3A1-206ENST00000471037 UPK1AO00322 258 aa8.23□□□□□ -1.09
SF3A1-206ENST00000471037 EEF1E1O43324 174 aaKnown RBP8.23□□□□□ -1.09
SF3A1-206ENST00000471037 TRAPPC6AO75865 159 aa8.23□□□□□ -1.09
SF3A1-206ENST00000471037 HEXAP06865 529 aa8.23□□□□□ -1.09
SF3A1-206ENST00000471037 HSD17B1P14061 328 aa8.23□□□□□ -1.09
SF3A1-206ENST00000471037 BMP7P18075 431 aa8.23□□□□□ -1.09
SF3A1-206ENST00000471037 GPX2P18283 190 aa8.23□□□□□ -1.09
SF3A1-206ENST00000471037 CD53P19397 219 aa8.23□□□□□ -1.09
SF3A1-206ENST00000471037 CASP3P42574 277 aa8.23□□□□□ -1.09
SF3A1-206ENST00000471037 MASP1P48740 699 aa8.23□□□□□ -1.09
SF3A1-206ENST00000471037 EEFSECP57772 596 aaKnown RBP8.23□□□□□ -1.09
SF3A1-206ENST00000471037 FBXW4P57775 412 aa8.23□□□□□ -1.09
SF3A1-206ENST00000471037 MTPNP58546 118 aa8.23□□□□□ -1.09
SF3A1-206ENST00000471037 RPP38P78345 283 aaKnown RBP8.23□□□□□ -1.09
SF3A1-206ENST00000471037 MGAT2Q10469 447 aa8.23□□□□□ -1.09
SF3A1-206ENST00000471037 FUT7Q11130 342 aa8.23□□□□□ -1.09
SF3A1-206ENST00000471037 TP53BP2Q13625 1128 aa8.23□□□□□ -1.09
SF3A1-206ENST00000471037 RABL3Q5HYI8 236 aa8.23□□□□□ -1.09
SF3A1-206ENST00000471037 DCST1Q5T197 706 aa8.23□□□□□ -1.09
SF3A1-206ENST00000471037 SHEQ5VZ18 495 aa8.23□□□□□ -1.09
SF3A1-206ENST00000471037 TMEM81Q6P7N7 255 aa8.23□□□□□ -1.09
SF3A1-206ENST00000471037 ZCCHC12Q6PEW1 402 aa8.23□□□□□ -1.09
SF3A1-206ENST00000471037 FAM111BQ6SJ93 734 aa8.23□□□□□ -1.09
SF3A1-206ENST00000471037 SZRD1Q7Z422 152 aa8.23□□□□□ -1.09
SF3A1-206ENST00000471037 ADGRE4PQ86SQ3 457 aa8.23□□□□□ -1.09
SF3A1-206ENST00000471037 OR7G2Q8NG99 324 aa8.23□□□□□ -1.09
SF3A1-206ENST00000471037 OR5AK3PQ8NH89 298 aa8.23□□□□□ -1.09
SF3A1-206ENST00000471037 ZPLD1Q8TCW7 415 aa8.23□□□□□ -1.09
SF3A1-206ENST00000471037 DOK4Q8TEW6 326 aa8.23□□□□□ -1.09
SF3A1-206ENST00000471037 SMPDL3BQ92485 455 aa8.23□□□□□ -1.09
SF3A1-206ENST00000471037 KAT2AQ92830 837 aa8.23□□□□□ -1.09
SF3A1-206ENST00000471037 ADIPOR1Q96A54 375 aa8.23□□□□□ -1.09
SF3A1-206ENST00000471037 ARSGQ96EG1 525 aa8.23□□□□□ -1.09
SF3A1-206ENST00000471037 SLC35G5Q96KT7 338 aa8.23□□□□□ -1.09
SF3A1-206ENST00000471037 ZFP3Q96NJ6 502 aa8.23□□□□□ -1.09
SF3A1-206ENST00000471037 DACH2Q96NX9 599 aa8.23□□□□□ -1.09
SF3A1-206ENST00000471037 GNRHR2Q96P88 292 aa8.23□□□□□ -1.09
SF3A1-206ENST00000471037 TRIB1Q96RU8 372 aa8.23□□□□□ -1.09
SF3A1-206ENST00000471037 CDRT15Q96T59 188 aa8.23□□□□□ -1.09
SF3A1-206ENST00000471037 SMR3AQ99954 134 aa8.23□□□□□ -1.09
SF3A1-206ENST00000471037 ECSITQ9BQ95 431 aa8.23□□□□□ -1.09
SF3A1-206ENST00000471037 YIPF4Q9BSR8 244 aa8.23□□□□□ -1.09
SF3A1-206ENST00000471037 THUMPD3Q9BV44 507 aaKnown RBP8.23□□□□□ -1.09
SF3A1-206ENST00000471037 SFXN3Q9BWM7 321 aa8.23□□□□□ -1.09
SF3A1-206ENST00000471037 SPATA9Q9BWV2 254 aa8.23□□□□□ -1.09
SF3A1-206ENST00000471037 IKZF5Q9H5V7 419 aa8.23□□□□□ -1.09
SF3A1-206ENST00000471037 KAT8Q9H7Z6 458 aaKnown RBP8.23□□□□□ -1.09
SF3A1-206ENST00000471037 CMTM6Q9NX76 183 aa8.23□□□□□ -1.09
SF3A1-206ENST00000471037 ZNF639Q9UID6 485 aa8.23□□□□□ -1.09
SF3A1-206ENST00000471037 C19orf53Q9UNZ5 99 aaPredicted RBP8.23□□□□□ -1.09
SF3A1-206ENST00000471037 CAMK2AQ9UQM7 478 aa8.23□□□□□ -1.09
SF3A1-206ENST00000471037 SLC6A5Q9Y345 797 aa8.23□□□□□ -1.09
SF3A1-206ENST00000471037 KIAA1549Q9HCM3 1950 aa8.22□□□□□ -1.09
SF3A1-206ENST00000471037 TTC36A6NLP5 189 aa8.22□□□□□ -1.09
SF3A1-206ENST00000471037 FAM171A2A8MVW0 826 aa8.22□□□□□ -1.09
SF3A1-206ENST00000471037 NME4O00746 187 aa8.22□□□□□ -1.09
SF3A1-206ENST00000471037 SOX30O94993 753 aa8.22□□□□□ -1.09
SF3A1-206ENST00000471037 PSMG1O95456 288 aa8.22□□□□□ -1.09
SF3A1-206ENST00000471037 ACTL6AO96019 429 aa8.22□□□□□ -1.09
SF3A1-206ENST00000471037 CT62P0C5K7 136 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms