RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 PCYT1AP49585 367 aa12.65□□□□□ -0.38
COMMD3-208ENST00000470045 ZNF41P51814 821 aaPredicted RBP12.65□□□□□ -0.38
COMMD3-208ENST00000470045 SUMO3P55854 103 aaPredicted RBP12.65□□□□□ -0.38
COMMD3-208ENST00000470045 GUSBP1Q15486 140 aa12.65□□□□□ -0.38
COMMD3-208ENST00000470045 CTU2Q2VPK5 515 aaKnown RBP12.65□□□□□ -0.38
COMMD3-208ENST00000470045 FAM174BQ3ZCQ3 159 aa12.65□□□□□ -0.38
COMMD3-208ENST00000470045 AGBL2Q5U5Z8 902 aa12.65□□□□□ -0.38
COMMD3-208ENST00000470045 AP1ARQ63HQ0 302 aa12.65□□□□□ -0.38
COMMD3-208ENST00000470045 SAXO2Q658L1 398 aa12.65□□□□□ -0.38
COMMD3-208ENST00000470045 HEPHL1Q6MZM0 1159 aa12.65□□□□□ -0.38
COMMD3-208ENST00000470045 CHMP1BQ7LBR1 199 aa12.65□□□□□ -0.38
COMMD3-208ENST00000470045 CDH24Q86UP0 819 aa12.65□□□□□ -0.38
COMMD3-208ENST00000470045 ANKRD46Q86W74 232 aa12.65□□□□□ -0.38
COMMD3-208ENST00000470045 WDR75Q8IWA0 830 aaKnown RBP12.65□□□□□ -0.38
COMMD3-208ENST00000470045 ZZZ3Q8IYH5 903 aa12.65□□□□□ -0.38
COMMD3-208ENST00000470045 CLEC4FQ8N1N0 589 aa12.65□□□□□ -0.38
COMMD3-208ENST00000470045 VPS37AQ8NEZ2 397 aa12.65□□□□□ -0.38
COMMD3-208ENST00000470045 POC1BQ8TC44 478 aa12.65□□□□□ -0.38
COMMD3-208ENST00000470045 SH3YL1Q96HL8 342 aaPredicted RBP12.65□□□□□ -0.38
COMMD3-208ENST00000470045 ZNF845Q96IR2 970 aaPredicted RBP12.65□□□□□ -0.38
COMMD3-208ENST00000470045 CCDC115Q96NT0 180 aa12.65□□□□□ -0.38
COMMD3-208ENST00000470045 NMUR2Q9GZQ4 415 aa12.65□□□□□ -0.38
COMMD3-208ENST00000470045 ZNF350Q9GZX5 532 aa12.65□□□□□ -0.38
COMMD3-208ENST00000470045 WDR55Q9H6Y2 383 aaPredicted RBP12.65□□□□□ -0.38
COMMD3-208ENST00000470045 MANSC1Q9H8J5 431 aa12.65□□□□□ -0.38
COMMD3-208ENST00000470045 GALNT8Q9NY28 637 aa12.65□□□□□ -0.38
COMMD3-208ENST00000470045 MARCOQ9UEW3 520 aaPredicted RBP12.65□□□□□ -0.38
COMMD3-208ENST00000470045 PACSIN3Q9UKS6 424 aa12.65□□□□□ -0.38
COMMD3-208ENST00000470045 PCDHGB4Q9UN71 923 aa12.65□□□□□ -0.38
COMMD3-208ENST00000470045 GPR45Q9Y5Y3 372 aa12.65□□□□□ -0.38
COMMD3-208ENST00000470045 A8MXE2 369 aa12.64□□□□□ -0.39
COMMD3-208ENST00000470045 GUSBP08236 651 aa12.64□□□□□ -0.39
COMMD3-208ENST00000470045 NUDT7P0C024 238 aa12.64□□□□□ -0.39
COMMD3-208ENST00000470045 ELK4P28324 431 aa12.64□□□□□ -0.39
COMMD3-208ENST00000470045 IL12AP29459 219 aa12.64□□□□□ -0.39
COMMD3-208ENST00000470045 P2RX1P51575 399 aa12.64□□□□□ -0.39
COMMD3-208ENST00000470045 RPS3AP61247 264 aaKnown RBP12.64□□□□□ -0.39
COMMD3-208ENST00000470045 UFM1P61960 85 aa12.64□□□□□ -0.39
COMMD3-208ENST00000470045 RAC1P63000 192 aa12.64□□□□□ -0.39
COMMD3-208ENST00000470045 DAZAP2Q15038 168 aaPredicted RBP12.64□□□□□ -0.39
COMMD3-208ENST00000470045 PON3Q15166 354 aa12.64□□□□□ -0.39
COMMD3-208ENST00000470045 ZNF141Q15928 474 aa12.64□□□□□ -0.39
COMMD3-208ENST00000470045 ARHGAP11BQ3KRB8 267 aa12.64□□□□□ -0.39
COMMD3-208ENST00000470045 CBLN3Q6UW01 205 aa12.64□□□□□ -0.39
COMMD3-208ENST00000470045 MAVSQ7Z434 540 aa12.64□□□□□ -0.39
COMMD3-208ENST00000470045 P4HA3Q7Z4N8 544 aa12.64□□□□□ -0.39
COMMD3-208ENST00000470045 TMEM200AQ86VY9 491 aa12.64□□□□□ -0.39
COMMD3-208ENST00000470045 FNDC9Q8TBE3 224 aa12.64□□□□□ -0.39
COMMD3-208ENST00000470045 PHOSPHO1Q8TCT1 267 aa12.64□□□□□ -0.39
COMMD3-208ENST00000470045 SMPDL3BQ92485 455 aa12.64□□□□□ -0.39
COMMD3-208ENST00000470045 STARD4Q96DR4 205 aa12.64□□□□□ -0.39
COMMD3-208ENST00000470045 NEURL3Q96EH8 262 aa12.64□□□□□ -0.39
COMMD3-208ENST00000470045 RNF145Q96MT1 663 aa12.64□□□□□ -0.39
COMMD3-208ENST00000470045 RBM24Q9BX46 236 aaKnown RBP12.64□□□□□ -0.39
COMMD3-208ENST00000470045 OR51I1Q9H343 314 aa12.64□□□□□ -0.39
COMMD3-208ENST00000470045 STOML1Q9UBI4 398 aa12.64□□□□□ -0.39
COMMD3-208ENST00000470045 BTNL2Q9UIR0 455 aa12.64□□□□□ -0.39
COMMD3-208ENST00000470045 KCNE5Q9UJ90 142 aa12.64□□□□□ -0.39
COMMD3-208ENST00000470045 DTNAQ9Y4J8 743 aa12.64□□□□□ -0.39
COMMD3-208ENST00000470045 SPG11Q96JI7 2443 aa12.64□□□□□ -0.39
COMMD3-208ENST00000470045 MPDZO75970 2070 aa12.63□□□□□ -0.39
COMMD3-208ENST00000470045 GOLGA8QA0A0J9YX86 632 aa12.63□□□□□ -0.39
COMMD3-208ENST00000470045 GOLGA8OA6NCC3 632 aa12.63□□□□□ -0.39
COMMD3-208ENST00000470045 TUBAL3A6NHL2 446 aa12.63□□□□□ -0.39
COMMD3-208ENST00000470045 A6NNC1 897 aa12.63□□□□□ -0.39
COMMD3-208ENST00000470045 GOLGA8NF8WBI6 632 aa12.63□□□□□ -0.39
COMMD3-208ENST00000470045 H3BNH8 94 aa12.63□□□□□ -0.39
COMMD3-208ENST00000470045 ETV2O00321 342 aaPredicted RBP12.63□□□□□ -0.39
COMMD3-208ENST00000470045 ZNF195O14628 629 aa12.63□□□□□ -0.39
COMMD3-208ENST00000470045 MSTNO14793 375 aa12.63□□□□□ -0.39
COMMD3-208ENST00000470045 ADAMDEC1O15204 470 aa12.63□□□□□ -0.39
COMMD3-208ENST00000470045 DNAJA2O60884 412 aa12.63□□□□□ -0.39
COMMD3-208ENST00000470045 STX11O75558 287 aa12.63□□□□□ -0.39
COMMD3-208ENST00000470045 AGR2O95994 175 aa12.63□□□□□ -0.39
COMMD3-208ENST00000470045 KITP10721 976 aa12.63□□□□□ -0.39
COMMD3-208ENST00000470045 FCGR2AP12318 317 aa12.63□□□□□ -0.39
COMMD3-208ENST00000470045 NID1P14543 1247 aa12.63□□□□□ -0.39
COMMD3-208ENST00000470045 ADH6P28332 368 aa12.63□□□□□ -0.39
COMMD3-208ENST00000470045 S100A3P33764 101 aa12.63□□□□□ -0.39
COMMD3-208ENST00000470045 EIF1P41567 113 aaKnown RBP12.63□□□□□ -0.39
COMMD3-208ENST00000470045 KIR2DL2P43627 348 aaPredicted RBP12.63□□□□□ -0.39
COMMD3-208ENST00000470045 FUT5Q11128 374 aa12.63□□□□□ -0.39
COMMD3-208ENST00000470045 FOXF1Q12946 379 aa12.63□□□□□ -0.39
COMMD3-208ENST00000470045 VWA1Q6PCB0 445 aa12.63□□□□□ -0.39
COMMD3-208ENST00000470045 LUZP2Q86TE4 346 aa12.63□□□□□ -0.39
COMMD3-208ENST00000470045 PIWIL2Q8TC59 973 aaKnown RBP12.63□□□□□ -0.39
COMMD3-208ENST00000470045 OIT3Q8WWZ8 545 aa12.63□□□□□ -0.39
COMMD3-208ENST00000470045 ARL8AQ96BM9 186 aa12.63□□□□□ -0.39
COMMD3-208ENST00000470045 ARSGQ96EG1 525 aa12.63□□□□□ -0.39
COMMD3-208ENST00000470045 POLE3Q9NRF9 147 aa12.63□□□□□ -0.39
COMMD3-208ENST00000470045 RASSF1Q9NS23 344 aa12.63□□□□□ -0.39
COMMD3-208ENST00000470045 PAQR5Q9NXK6 330 aaPredicted RBP12.63□□□□□ -0.39
COMMD3-208ENST00000470045 CARD8Q9Y2G2 431 aa12.63□□□□□ -0.39
COMMD3-208ENST00000470045 AKAP9Q99996 3911 aa12.62□□□□□ -0.39
COMMD3-208ENST00000470045 CENPVL1A0A0U1RR11 272 aa12.62□□□□□ -0.39
COMMD3-208ENST00000470045 SERINC4A6NH21 518 aa12.62□□□□□ -0.39
COMMD3-208ENST00000470045 C9JVG2 144 aa12.62□□□□□ -0.39
COMMD3-208ENST00000470045 EIF1AYO14602 144 aaKnown RBP12.62□□□□□ -0.39
COMMD3-208ENST00000470045 ZNF264O43296 627 aa12.62□□□□□ -0.39
COMMD3-208ENST00000470045 KIAA0513O60268 411 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms