RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 BHLHE40O14503 412 aa13.61□□□□□ -0.23
CBWD3-205ENST00000469687 CASKO14936 926 aa13.61□□□□□ -0.23
CBWD3-205ENST00000469687 HYAL3O43820 417 aaPredicted RBP13.61□□□□□ -0.23
CBWD3-205ENST00000469687 IGHV4-34P06331 123 aa13.61□□□□□ -0.23
CBWD3-205ENST00000469687 CD8BP10966 210 aa13.61□□□□□ -0.23
CBWD3-205ENST00000469687 DRD1P21728 446 aa13.61□□□□□ -0.23
CBWD3-205ENST00000469687 FGF9P31371 208 aaPredicted RBP13.61□□□□□ -0.23
CBWD3-205ENST00000469687 MAP3K8P41279 467 aa13.61□□□□□ -0.23
CBWD3-205ENST00000469687 YPEL5P62699 121 aa13.61□□□□□ -0.23
CBWD3-205ENST00000469687 KRR1Q13601 381 aaKnown RBP13.61□□□□□ -0.23
CBWD3-205ENST00000469687 KLHL36Q8N4N3 616 aa13.61□□□□□ -0.23
CBWD3-205ENST00000469687 ZNF614Q8N883 585 aa13.61□□□□□ -0.23
CBWD3-205ENST00000469687 OR4N2Q8NGD1 307 aa13.61□□□□□ -0.23
CBWD3-205ENST00000469687 OR9A4Q8NGU2 314 aa13.61□□□□□ -0.23
CBWD3-205ENST00000469687 GRHL3Q8TE85 626 aa13.61□□□□□ -0.23
CBWD3-205ENST00000469687 TMCO6Q96DC7 493 aa13.61□□□□□ -0.23
CBWD3-205ENST00000469687 TEX12Q9BXU0 123 aa13.61□□□□□ -0.23
CBWD3-205ENST00000469687 MARCH7Q9H992 704 aa13.61□□□□□ -0.23
CBWD3-205ENST00000469687 POT1Q9NUX5 634 aa13.61□□□□□ -0.23
CBWD3-205ENST00000469687 TNFRSF10DQ9UBN6 386 aa13.61□□□□□ -0.23
CBWD3-205ENST00000469687 SATB2Q9UPW6 733 aa13.61□□□□□ -0.23
CBWD3-205ENST00000469687 RBMX2Q9Y388 322 aaKnown RBP13.61□□□□□ -0.23
CBWD3-205ENST00000469687 HEATR5AQ86XA9 2040 aa13.6□□□□□ -0.23
CBWD3-205ENST00000469687 TRAV27A0A087WT01 109 aa13.6□□□□□ -0.23
CBWD3-205ENST00000469687 A0A087WV62 115 aa13.6□□□□□ -0.23
CBWD3-205ENST00000469687 TRDV1A0A1B0GX56 115 aa13.6□□□□□ -0.23
CBWD3-205ENST00000469687 FABP12A6NFH5 140 aa13.6□□□□□ -0.23
CBWD3-205ENST00000469687 J3QRE1 110 aa13.6□□□□□ -0.23
CBWD3-205ENST00000469687 GABRPO00591 440 aa13.6□□□□□ -0.23
CBWD3-205ENST00000469687 CBX7O95931 251 aa13.6□□□□□ -0.23
CBWD3-205ENST00000469687 TNFP01375 233 aa13.6□□□□□ -0.23
CBWD3-205ENST00000469687 CSF3P09919 207 aa13.6□□□□□ -0.23
CBWD3-205ENST00000469687 ST6GAL1P15907 406 aa13.6□□□□□ -0.23
CBWD3-205ENST00000469687 LTBRP36941 435 aa13.6□□□□□ -0.23
CBWD3-205ENST00000469687 MRPS21P82921 87 aaKnown RBP13.6□□□□□ -0.23
CBWD3-205ENST00000469687 EIF2B5Q13144 721 aaKnown RBP13.6□□□□□ -0.23
CBWD3-205ENST00000469687 EOGTQ5NDL2 527 aa13.6□□□□□ -0.23
CBWD3-205ENST00000469687 ARMC4Q5T2S8 1044 aa13.6□□□□□ -0.23
CBWD3-205ENST00000469687 NIPAL3Q6P499 406 aa13.6□□□□□ -0.23
CBWD3-205ENST00000469687 ZNF322Q6U7Q0 402 aaPredicted RBP13.6□□□□□ -0.23
CBWD3-205ENST00000469687 DNAJC5GQ8N7S2 189 aa13.6□□□□□ -0.23
CBWD3-205ENST00000469687 FAM181AQ8N9Y4 354 aa13.6□□□□□ -0.23
CBWD3-205ENST00000469687 OR52R1Q8NGF1 315 aa13.6□□□□□ -0.23
CBWD3-205ENST00000469687 CNOT9Q92600 299 aaKnown RBP13.6□□□□□ -0.23
CBWD3-205ENST00000469687 HS6ST2Q96MM7 605 aa13.6□□□□□ -0.23
CBWD3-205ENST00000469687 PTCHD1Q96NR3 888 aa13.6□□□□□ -0.23
CBWD3-205ENST00000469687 CD180Q99467 661 aa13.6□□□□□ -0.23
CBWD3-205ENST00000469687 TIMP4Q99727 224 aa13.6□□□□□ -0.23
CBWD3-205ENST00000469687 MED18Q9BUE0 208 aa13.6□□□□□ -0.23
CBWD3-205ENST00000469687 MEPEQ9NQ76 525 aaPredicted RBP13.6□□□□□ -0.23
CBWD3-205ENST00000469687 H2AFY2Q9P0M6 372 aaPredicted RBP13.6□□□□□ -0.23
CBWD3-205ENST00000469687 COMMD3Q9UBI1 195 aa13.6□□□□□ -0.23
CBWD3-205ENST00000469687 GSTK1Q9Y2Q3 226 aa13.6□□□□□ -0.23
CBWD3-205ENST00000469687 SIRT4Q9Y6E7 314 aaPredicted RBP13.6□□□□□ -0.23
CBWD3-205ENST00000469687 C12orf71A8MTZ7 269 aa13.59□□□□□ -0.23
CBWD3-205ENST00000469687 HRKO00198 91 aa13.59□□□□□ -0.23
CBWD3-205ENST00000469687 BRINP1O60477 761 aa13.59□□□□□ -0.23
CBWD3-205ENST00000469687 CDC123O75794 336 aaPredicted RBP13.59□□□□□ -0.23
CBWD3-205ENST00000469687 HMGN1P05114 100 aa13.59□□□□□ -0.23
CBWD3-205ENST00000469687 OR2B6P58173 313 aa13.59□□□□□ -0.23
CBWD3-205ENST00000469687 DDI2Q5TDH0 399 aa13.59□□□□□ -0.23
CBWD3-205ENST00000469687 MARCH9Q86YJ5 346 aa13.59□□□□□ -0.23
CBWD3-205ENST00000469687 TMEM99Q8N816 258 aa13.59□□□□□ -0.23
CBWD3-205ENST00000469687 TOR1AIP2Q8NFQ8 470 aa13.59□□□□□ -0.23
CBWD3-205ENST00000469687 BRIX1Q8TDN6 353 aaKnown RBP13.59□□□□□ -0.23
CBWD3-205ENST00000469687 SMAP2Q8WU79 429 aaPredicted RBP13.59□□□□□ -0.23
CBWD3-205ENST00000469687 CTHRC1Q96CG8 243 aa13.59□□□□□ -0.23
CBWD3-205ENST00000469687 STACQ99469 402 aa13.59□□□□□ -0.23
CBWD3-205ENST00000469687 USP36Q9P275 1121 aaKnown RBP13.59□□□□□ -0.23
CBWD3-205ENST00000469687 SPACA6W5XKT8 324 aa13.59□□□□□ -0.23
CBWD3-205ENST00000469687 OR2W5A6NFC9 320 aa13.59□□□□□ -0.23
CBWD3-205ENST00000469687 TGFBR3LH3BV60 316 aa13.59□□□□□ -0.23
CBWD3-205ENST00000469687 DYRK3O43781 588 aa13.59□□□□□ -0.23
CBWD3-205ENST00000469687 AKAP8O43823 692 aaKnown RBP13.59□□□□□ -0.23
CBWD3-205ENST00000469687 REM1O75628 298 aa13.59□□□□□ -0.23
CBWD3-205ENST00000469687 CLUP10909 449 aa13.59□□□□□ -0.23
CBWD3-205ENST00000469687 NR4A2P43354 598 aa13.59□□□□□ -0.23
CBWD3-205ENST00000469687 EMDP50402 254 aa13.59□□□□□ -0.23
CBWD3-205ENST00000469687 POU6F2P78424 691 aaPredicted RBP13.59□□□□□ -0.23
CBWD3-205ENST00000469687 DAB2P98082 770 aa13.59□□□□□ -0.23
CBWD3-205ENST00000469687 GPR50Q13585 617 aa13.59□□□□□ -0.23
CBWD3-205ENST00000469687 KLHL12Q53G59 568 aa13.59□□□□□ -0.23
CBWD3-205ENST00000469687 PDZK1Q5T2W1 519 aa13.59□□□□□ -0.23
CBWD3-205ENST00000469687 AGAP6Q5VW22 663 aa13.59□□□□□ -0.23
CBWD3-205ENST00000469687 TMEM91Q6ZNR0 172 aa13.59□□□□□ -0.23
CBWD3-205ENST00000469687 TAF8Q7Z7C8 310 aa13.59□□□□□ -0.23
CBWD3-205ENST00000469687 ABI3BPQ7Z7G0 1075 aa13.59□□□□□ -0.23
CBWD3-205ENST00000469687 UBE2J2Q8N2K1 259 aa13.59□□□□□ -0.23
CBWD3-205ENST00000469687 ATP6V1C2Q8NEY4 427 aa13.59□□□□□ -0.23
CBWD3-205ENST00000469687 NEIL3Q8TAT5 605 aa13.59□□□□□ -0.23
CBWD3-205ENST00000469687 SETD6Q8TBK2 473 aa13.59□□□□□ -0.23
CBWD3-205ENST00000469687 KISS1RQ969F8 398 aaPredicted RBP13.59□□□□□ -0.23
CBWD3-205ENST00000469687 BPIFA2Q96DR5 249 aa13.59□□□□□ -0.23
CBWD3-205ENST00000469687 ABHD8Q96I13 439 aa13.59□□□□□ -0.23
CBWD3-205ENST00000469687 AGAP4Q96P64 663 aa13.59□□□□□ -0.23
CBWD3-205ENST00000469687 CCDC3Q9BQI4 270 aa13.59□□□□□ -0.23
CBWD3-205ENST00000469687 MMP28Q9H239 520 aa13.59□□□□□ -0.23
CBWD3-205ENST00000469687 PRDM9Q9NQV7 894 aa13.59□□□□□ -0.23
CBWD3-205ENST00000469687 MALT1Q9UDY8 824 aa13.59□□□□□ -0.23
CBWD3-205ENST00000469687 FBXL4Q9UKA2 621 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms