RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 UBQLN2Q9UHD9 624 aa8.94□□□□□ -0.98
HDAC3-205ENST00000469550 LIPT1Q9Y234 373 aa8.94□□□□□ -0.98
HDAC3-205ENST00000469550 DYRK1BQ9Y463 629 aa8.94□□□□□ -0.98
HDAC3-205ENST00000469550 NUMA1Q14980 2115 aa8.94□□□□□ -0.98
HDAC3-205ENST00000469550 CACNA1GO43497 2377 aa8.94□□□□□ -0.98
HDAC3-205ENST00000469550 MEIKINA0A087WXM9 373 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 A0A1B0GVT2 93 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 ANKDD1BA6NHY2 528 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 GTPBP1O00178 669 aaKnown RBP8.93□□□□□ -0.98
HDAC3-205ENST00000469550 LRRTM2O43300 516 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 SLC28A2O43868 658 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 PAHP00439 452 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 LALBAP00709 142 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 TGFB1P01137 390 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 GBAP04062 536 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 KLK1P06870 262 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 NPR2P20594 1047 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 IFNGR2P38484 337 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 ETV3P41162 512 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 PITPNBP48739 271 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 RAB14P61106 215 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 PIN1Q13526 163 aaPredicted RBP8.93□□□□□ -0.98
HDAC3-205ENST00000469550 CAMK2DQ13557 499 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 GALEQ14376 348 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 NTRK2Q16620 822 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 CCSMST1Q4G0I0 132 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 AADACL4Q5VUY2 407 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 ZNF776Q68DI1 518 aaPredicted RBP8.93□□□□□ -0.98
HDAC3-205ENST00000469550 PYHIN1Q6K0P9 492 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 TMEM91Q6ZNR0 172 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 PRSS42Q7Z5A4 293 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 ASPGQ86U10 573 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 FIBINQ8TAL6 211 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 TEX47Q8TBZ9 253 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 GNPDA2Q8TDQ7 276 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 CYB5D2Q8WUJ1 264 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 ZNF764Q96H86 408 aaPredicted RBP8.93□□□□□ -0.98
HDAC3-205ENST00000469550 PRRC1Q96M27 445 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 FOPNLQ96NB1 174 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 SGPP1Q9BX95 441 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 PPA2Q9H2U2 334 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 OR51B5Q9H339 312 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 OSGEPL1Q9H4B0 414 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 PRM3Q9NNZ6 103 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 C12orf4Q9NQ89 552 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 IMP3Q9NV31 184 aaKnown RBP8.93□□□□□ -0.98
HDAC3-205ENST00000469550 MED17Q9NVC6 651 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 LYARQ9NX58 379 aaKnown RBP8.93□□□□□ -0.98
HDAC3-205ENST00000469550 EMC3Q9P0I2 261 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 KLF15Q9UIH9 416 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 ZNF222Q9UK12 451 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 ITM2BQ9Y287 266 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 HMGN4O00479 90 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 TSPAN9O75954 239 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 NCR1O76036 304 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 UBXN7O94888 489 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 SULT1A3P0DMM9 295 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 SULT1A4P0DMN0 295 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 UGT2B7P16662 529 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 CD53P19397 219 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 CELP19835 753 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 DDCP20711 480 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 ENPP1P22413 925 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 CD70P32970 193 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 SOX18P35713 384 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 MMP12P39900 470 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 FRKP42685 505 aaPredicted RBP8.93□□□□□ -0.98
HDAC3-205ENST00000469550 CDH11P55287 796 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 POLR2LP62875 67 aaKnown RBP8.93□□□□□ -0.98
HDAC3-205ENST00000469550 EXOSC2Q13868 293 aaKnown RBP8.93□□□□□ -0.98
HDAC3-205ENST00000469550 LGALSLQ3ZCW2 172 aaPredicted RBP8.93□□□□□ -0.98
HDAC3-205ENST00000469550 SYTL3Q4VX76 610 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 VASNQ6EMK4 673 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 TNFAIP8L2Q6P589 184 aaPredicted RBP8.93□□□□□ -0.98
HDAC3-205ENST00000469550 RASSF6Q6ZTQ3 369 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 C6orf120Q7Z4R8 191 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 CMIPQ8IY22 773 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 ZFP41Q8N8Y5 198 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 SETD7Q8WTS6 366 aaKnown RBP8.93□□□□□ -0.98
HDAC3-205ENST00000469550 ZNF480Q8WV37 535 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 SLC9A6Q92581 669 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 NXPE2Q96DL1 559 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 GPA33Q99795 319 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 C7orf50Q9BRJ6 194 aaKnown RBP8.93□□□□□ -0.98
HDAC3-205ENST00000469550 ZSCAN5AQ9BUG6 496 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 TMED9Q9BVK6 235 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 SPATA5L1Q9BVQ7 753 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 GSX2Q9BZM3 304 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 CCDC86Q9H6F5 360 aaKnown RBP8.93□□□□□ -0.98
HDAC3-205ENST00000469550 ENAMQ9NRM1 1142 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 AHSPQ9NZD4 102 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 B4GALT6Q9UBX8 382 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 KIF25Q9UIL4 384 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 SCP2D1Q9UJQ7 156 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 SLC9A8Q9Y2E8 581 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 NPTNQ9Y639 398 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 ZZEF1O43149 2961 aa8.93□□□□□ -0.98
HDAC3-205ENST00000469550 PCM1Q15154 2024 aa8.92□□□□□ -0.98
HDAC3-205ENST00000469550 TEX13CA0A0J9YWL9 993 aa8.92□□□□□ -0.98
HDAC3-205ENST00000469550 LANCL1O43813 399 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms