RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 PTPN6P29350 595 aa13.19□□□□□ -0.3
COL27A1-203ENST00000468565 KRT20P35900 424 aa13.19□□□□□ -0.3
COL27A1-203ENST00000468565 RPL5P46777 297 aaKnown RBP13.19□□□□□ -0.3
COL27A1-203ENST00000468565 CDK9P50750 372 aaKnown RBP13.19□□□□□ -0.3
COL27A1-203ENST00000468565 PNLIPRP2P54317 469 aa13.19□□□□□ -0.3
COL27A1-203ENST00000468565 PSG6Q00889 435 aa13.19□□□□□ -0.3
COL27A1-203ENST00000468565 ROR2Q01974 943 aaKnown RBP13.19□□□□□ -0.3
COL27A1-203ENST00000468565 ZNF155Q12901 538 aaPredicted RBP13.19□□□□□ -0.3
COL27A1-203ENST00000468565 CDSNQ15517 529 aa13.19□□□□□ -0.3
COL27A1-203ENST00000468565 DESI1Q6ICB0 168 aa13.19□□□□□ -0.3
COL27A1-203ENST00000468565 OR5M9Q8NGP3 310 aa13.19□□□□□ -0.3
COL27A1-203ENST00000468565 ZFP28Q8NHY6 868 aa13.19□□□□□ -0.3
COL27A1-203ENST00000468565 ASB5Q8WWX0 329 aa13.19□□□□□ -0.3
COL27A1-203ENST00000468565 RND1Q92730 232 aa13.19□□□□□ -0.3
COL27A1-203ENST00000468565 GFM2Q969S9 779 aaKnown RBP13.19□□□□□ -0.3
COL27A1-203ENST00000468565 SDCCAG3Q96C92 435 aa13.19□□□□□ -0.3
COL27A1-203ENST00000468565 PPCDCQ96CD2 204 aa13.19□□□□□ -0.3
COL27A1-203ENST00000468565 TSSK3Q96PN8 268 aa13.19□□□□□ -0.3
COL27A1-203ENST00000468565 SH3GL1Q99961 368 aa13.19□□□□□ -0.3
COL27A1-203ENST00000468565 SLC6A15Q9H2J7 730 aa13.19□□□□□ -0.3
COL27A1-203ENST00000468565 DDX18Q9NVP1 670 aaKnown RBP13.19□□□□□ -0.3
COL27A1-203ENST00000468565 CHCHD3Q9NX63 227 aaKnown RBP13.19□□□□□ -0.3
COL27A1-203ENST00000468565 KLRF1Q9NZS2 232 aa13.19□□□□□ -0.3
COL27A1-203ENST00000468565 CELSR2Q9HCU4 2923 aa13.19□□□□□ -0.3
COL27A1-203ENST00000468565 NUP214P35658 2090 aaPredicted RBP13.19□□□□□ -0.3
COL27A1-203ENST00000468565 TPST1O60507 370 aa13.19□□□□□ -0.3
COL27A1-203ENST00000468565 ICOSLGO75144 302 aa13.19□□□□□ -0.3
COL27A1-203ENST00000468565 NME6O75414 186 aaPredicted RBP13.19□□□□□ -0.3
COL27A1-203ENST00000468565 PRPS2P11908 318 aa13.19□□□□□ -0.3
COL27A1-203ENST00000468565 BCKDHAP12694 445 aa13.19□□□□□ -0.3
COL27A1-203ENST00000468565 GABRA1P14867 456 aa13.19□□□□□ -0.3
COL27A1-203ENST00000468565 FRKP42685 505 aaPredicted RBP13.19□□□□□ -0.3
COL27A1-203ENST00000468565 ADRM1Q16186 407 aa13.19□□□□□ -0.3
COL27A1-203ENST00000468565 FAM174BQ3ZCQ3 159 aa13.19□□□□□ -0.3
COL27A1-203ENST00000468565 GLYATQ6IB77 296 aa13.19□□□□□ -0.3
COL27A1-203ENST00000468565 ZNF585AQ6P3V2 769 aa13.19□□□□□ -0.3
COL27A1-203ENST00000468565 ANGPTL8Q6UXH0 198 aa13.19□□□□□ -0.3
COL27A1-203ENST00000468565 SLC44A2Q8IWA5 706 aaPredicted RBP13.19□□□□□ -0.3
COL27A1-203ENST00000468565 OR1J4Q8NGS1 313 aa13.19□□□□□ -0.3
COL27A1-203ENST00000468565 GNRHR2Q96P88 292 aa13.19□□□□□ -0.3
COL27A1-203ENST00000468565 ACSS1Q9NUB1 689 aaPredicted RBP13.19□□□□□ -0.3
COL27A1-203ENST00000468565 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.19□□□□□ -0.3
COL27A1-203ENST00000468565 PDLIM1O00151 329 aa13.18□□□□□ -0.3
COL27A1-203ENST00000468565 SOCS2O14508 198 aa13.18□□□□□ -0.3
COL27A1-203ENST00000468565 GNB5O14775 395 aa13.18□□□□□ -0.3
COL27A1-203ENST00000468565 TRAPPC6AO75865 159 aa13.18□□□□□ -0.3
COL27A1-203ENST00000468565 IL12BP29460 328 aa13.18□□□□□ -0.3
COL27A1-203ENST00000468565 RPL3P39023 403 aaKnown RBP13.18□□□□□ -0.3
COL27A1-203ENST00000468565 PEX19P40855 299 aa13.18□□□□□ -0.3
COL27A1-203ENST00000468565 NUP107P57740 925 aa13.18□□□□□ -0.3
COL27A1-203ENST00000468565 MTPNP58546 118 aa13.18□□□□□ -0.3
COL27A1-203ENST00000468565 GK3PQ14409 553 aa13.18□□□□□ -0.3
COL27A1-203ENST00000468565 PTGR1Q14914 329 aa13.18□□□□□ -0.3
COL27A1-203ENST00000468565 ATP6AP1Q15904 470 aa13.18□□□□□ -0.3
COL27A1-203ENST00000468565 CYP27C1Q4G0S4 372 aa13.18□□□□□ -0.3
COL27A1-203ENST00000468565 ZNF385BQ569K4 471 aa13.18□□□□□ -0.3
COL27A1-203ENST00000468565 KRT80Q6KB66 452 aa13.18□□□□□ -0.3
COL27A1-203ENST00000468565 ANKRD26P1Q6NSI1 321 aa13.18□□□□□ -0.3
COL27A1-203ENST00000468565 B3GNT6Q6ZMB0 384 aa13.18□□□□□ -0.3
COL27A1-203ENST00000468565 R3HCC1LQ7Z5L2 792 aaKnown RBP13.18□□□□□ -0.3
COL27A1-203ENST00000468565 CARM1Q86X55 608 aa13.18□□□□□ -0.3
COL27A1-203ENST00000468565 RPRMLQ8N4K4 120 aa13.18□□□□□ -0.3
COL27A1-203ENST00000468565 CBR4Q8N4T8 237 aa13.18□□□□□ -0.3
COL27A1-203ENST00000468565 CLHC1Q8NHS4 586 aa13.18□□□□□ -0.3
COL27A1-203ENST00000468565 FAM110BQ8TC76 370 aa13.18□□□□□ -0.3
COL27A1-203ENST00000468565 CA5BP1Q8WTZ4 195 aa13.18□□□□□ -0.3
COL27A1-203ENST00000468565 RNF138Q8WVD3 245 aa13.18□□□□□ -0.3
COL27A1-203ENST00000468565 MARVELD3Q96A59 401 aa13.18□□□□□ -0.3
COL27A1-203ENST00000468565 ZBED6CLQ96FA7 236 aaPredicted RBP13.18□□□□□ -0.3
COL27A1-203ENST00000468565 ADOQ96SZ5 270 aa13.18□□□□□ -0.3
COL27A1-203ENST00000468565 LMF2Q9BU23 707 aaKnown RBP13.18□□□□□ -0.3
COL27A1-203ENST00000468565 RUBCNLQ9H714 662 aa13.18□□□□□ -0.3
COL27A1-203ENST00000468565 TNFRSF10DQ9UBN6 386 aa13.18□□□□□ -0.3
COL27A1-203ENST00000468565 OR10H1Q9Y4A9 318 aa13.18□□□□□ -0.3
COL27A1-203ENST00000468565 FAM215AQ9Y5M1 114 aa13.18□□□□□ -0.3
COL27A1-203ENST00000468565 ITPR2Q14571 2701 aa13.18□□□□□ -0.3
COL27A1-203ENST00000468565 RNF103-CHMP3A0A140T963 221 aa13.17□□□□□ -0.3
COL27A1-203ENST00000468565 GSTA4O15217 222 aa13.17□□□□□ -0.3
COL27A1-203ENST00000468565 PGRP06401 933 aa13.17□□□□□ -0.3
COL27A1-203ENST00000468565 CHRNB4P30926 498 aa13.17□□□□□ -0.3
COL27A1-203ENST00000468565 PTGER4P35408 488 aa13.17□□□□□ -0.3
COL27A1-203ENST00000468565 HPCAL1P37235 193 aa13.17□□□□□ -0.3
COL27A1-203ENST00000468565 MAGEA8P43361 318 aa13.17□□□□□ -0.3
COL27A1-203ENST00000468565 TRPC1P48995 793 aa13.17□□□□□ -0.3
COL27A1-203ENST00000468565 PRSS12P56730 875 aa13.17□□□□□ -0.3
COL27A1-203ENST00000468565 CRYZQ08257 329 aaKnown RBP13.17□□□□□ -0.3
COL27A1-203ENST00000468565 ZNHIT3Q15649 155 aaPredicted RBP13.17□□□□□ -0.3
COL27A1-203ENST00000468565 NHSL2Q5HYW2 709 aa13.17□□□□□ -0.3
COL27A1-203ENST00000468565 C1orf185Q5T7R7 199 aa13.17□□□□□ -0.3
COL27A1-203ENST00000468565 RTL6Q6ICC9 239 aa13.17□□□□□ -0.3
COL27A1-203ENST00000468565 ZNF551Q7Z340 670 aaPredicted RBP13.17□□□□□ -0.3
COL27A1-203ENST00000468565 GTF2H4Q92759 462 aa13.17□□□□□ -0.3
COL27A1-203ENST00000468565 CIDECQ96AQ7 238 aaPredicted RBP13.17□□□□□ -0.3
COL27A1-203ENST00000468565 PRPF18Q99633 342 aaKnown RBP13.17□□□□□ -0.3
COL27A1-203ENST00000468565 TTYH2Q9BSA4 534 aa13.17□□□□□ -0.3
COL27A1-203ENST00000468565 ANKRD60Q9BZ19 345 aa13.17□□□□□ -0.3
COL27A1-203ENST00000468565 PIF1Q9H611 641 aa13.17□□□□□ -0.3
COL27A1-203ENST00000468565 GALNT9Q9HCQ5 603 aa13.17□□□□□ -0.3
COL27A1-203ENST00000468565 SH3BP4Q9P0V3 963 aa13.17□□□□□ -0.3
COL27A1-203ENST00000468565 ATP6V1HQ9UI12 483 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms