RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 KLF4O43474 513 aa21.88■■□□□ 1.09
PTCH1-210ENST00000468211 SMPD2O60906 423 aa21.88■■□□□ 1.09
PTCH1-210ENST00000468211 NID1P14543 1247 aa21.88■■□□□ 1.09
PTCH1-210ENST00000468211 LTBQ06643 244 aa21.88■■□□□ 1.09
PTCH1-210ENST00000468211 FOXF1Q12946 379 aa21.88■■□□□ 1.09
PTCH1-210ENST00000468211 DDX59Q5T1V6 619 aaKnown RBP eCLIP21.88■■□□□ 1.09
PTCH1-210ENST00000468211 HBMQ6B0K9 141 aa21.88■■□□□ 1.09
PTCH1-210ENST00000468211 ESPNLQ6ZVH7 1005 aa21.88■■□□□ 1.09
PTCH1-210ENST00000468211 MISPQ8IVT2 679 aa21.88■■□□□ 1.09
PTCH1-210ENST00000468211 CIARTQ8N365 385 aaPredicted RBP21.88■■□□□ 1.09
PTCH1-210ENST00000468211 PPP1R14CQ8TAE6 165 aa21.88■■□□□ 1.09
PTCH1-210ENST00000468211 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.88■■□□□ 1.09
PTCH1-210ENST00000468211 ROBO4Q8WZ75 1007 aa21.88■■□□□ 1.09
PTCH1-210ENST00000468211 PIGTQ969N2 578 aa21.88■■□□□ 1.09
PTCH1-210ENST00000468211 ZNF524Q96C55 264 aa21.88■■□□□ 1.09
PTCH1-210ENST00000468211 EML4Q9HC35 981 aaKnown RBP21.88■■□□□ 1.09
PTCH1-210ENST00000468211 HHATLQ9HCP6 504 aa21.88■■□□□ 1.09
PTCH1-210ENST00000468211 GPATCH2Q9NW75 528 aa21.88■■□□□ 1.09
PTCH1-210ENST00000468211 PAQR5Q9NXK6 330 aaPredicted RBP21.88■■□□□ 1.09
PTCH1-210ENST00000468211 LGALS13Q9UHV8 139 aa21.88■■□□□ 1.09
PTCH1-210ENST00000468211 SYNGR4O95473 234 aa21.87■■□□□ 1.09
PTCH1-210ENST00000468211 C6orf47O95873 294 aa21.87■■□□□ 1.09
PTCH1-210ENST00000468211 NUDT17P0C025 328 aa21.87■■□□□ 1.09
PTCH1-210ENST00000468211 ADSLP30566 484 aaPredicted RBP21.87■■□□□ 1.09
PTCH1-210ENST00000468211 SFTPDP35247 375 aa21.87■■□□□ 1.09
PTCH1-210ENST00000468211 CCT3P49368 545 aaKnown RBP21.87■■□□□ 1.09
PTCH1-210ENST00000468211 TP53BP2Q13625 1128 aa21.87■■□□□ 1.09
PTCH1-210ENST00000468211 NDUFAF6Q330K2 333 aa21.87■■□□□ 1.09
PTCH1-210ENST00000468211 KLHL26Q53HC5 615 aa21.87■■□□□ 1.09
PTCH1-210ENST00000468211 IL23RQ5VWK5 629 aa21.87■■□□□ 1.09
PTCH1-210ENST00000468211 CDC73Q6P1J9 531 aa21.87■■□□□ 1.09
PTCH1-210ENST00000468211 P3H2Q8IVL5 708 aa21.87■■□□□ 1.09
PTCH1-210ENST00000468211 LILRA2Q8N149 483 aa21.87■■□□□ 1.09
PTCH1-210ENST00000468211 LRRC75A-AS1Q8N1F1 130 aa21.87■■□□□ 1.09
PTCH1-210ENST00000468211 RIBC1Q8N443 379 aaPredicted RBP21.87■■□□□ 1.09
PTCH1-210ENST00000468211 PSMA8Q8TAA3 256 aa21.87■■□□□ 1.09
PTCH1-210ENST00000468211 PHOSPHO1Q8TCT1 267 aa21.87■■□□□ 1.09
PTCH1-210ENST00000468211 OR5P2Q8WZ92 322 aa21.87■■□□□ 1.09
PTCH1-210ENST00000468211 OSTF1Q92882 214 aa21.87■■□□□ 1.09
PTCH1-210ENST00000468211 CAVIN3Q969G5 261 aa21.87■■□□□ 1.09
PTCH1-210ENST00000468211 KLHL15Q96M94 604 aa21.87■■□□□ 1.09
PTCH1-210ENST00000468211 CCL19Q99731 98 aa21.87■■□□□ 1.09
PTCH1-210ENST00000468211 ZANQ9Y493 2812 aa21.87■■□□□ 1.09
PTCH1-210ENST00000468211 FN1P02751 2386 aaKnown RBP21.86■■□□□ 1.09
PTCH1-210ENST00000468211 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP21.86■■□□□ 1.09
PTCH1-210ENST00000468211 ARHGEF9O43307 516 aa21.86■■□□□ 1.09
PTCH1-210ENST00000468211 SKAP2O75563 359 aaPredicted RBP21.86■■□□□ 1.09
PTCH1-210ENST00000468211 MAPK1P28482 360 aa21.86■■□□□ 1.09
PTCH1-210ENST00000468211 TOMM34Q15785 309 aaPredicted RBP21.86■■□□□ 1.09
PTCH1-210ENST00000468211 ATP6AP1LQ52LC2 224 aa21.86■■□□□ 1.09
PTCH1-210ENST00000468211 RIMKLAQ8IXN7 391 aa21.86■■□□□ 1.09
PTCH1-210ENST00000468211 COQ8BQ96D53 544 aa21.86■■□□□ 1.09
PTCH1-210ENST00000468211 ACTRT3Q9BYD9 372 aa21.86■■□□□ 1.09
PTCH1-210ENST00000468211 SRXN1Q9BYN0 137 aa21.86■■□□□ 1.09
PTCH1-210ENST00000468211 C12orf49Q9H741 205 aa21.86■■□□□ 1.09
PTCH1-210ENST00000468211 ICAM5Q9UMF0 924 aa21.86■■□□□ 1.09
PTCH1-210ENST00000468211 CARD8Q9Y2G2 431 aa21.86■■□□□ 1.09
PTCH1-210ENST00000468211 UQCRHLA0A096LP55 91 aa21.85■■□□□ 1.09
PTCH1-210ENST00000468211 HSPA4LO95757 839 aa21.85■■□□□ 1.09
PTCH1-210ENST00000468211 PLAUP00749 431 aa21.85■■□□□ 1.09
PTCH1-210ENST00000468211 FPR1P21462 350 aa21.85■■□□□ 1.09
PTCH1-210ENST00000468211 ME2P23368 584 aa21.85■■□□□ 1.09
PTCH1-210ENST00000468211 AGTR1P30556 359 aa21.85■■□□□ 1.09
PTCH1-210ENST00000468211 RPL3P39023 403 aaKnown RBP21.85■■□□□ 1.09
PTCH1-210ENST00000468211 CARD18P57730 90 aa21.85■■□□□ 1.09
PTCH1-210ENST00000468211 VSNL1P62760 191 aa21.85■■□□□ 1.09
PTCH1-210ENST00000468211 DCST2Q5T1A1 773 aa21.85■■□□□ 1.09
PTCH1-210ENST00000468211 FNDC5Q8NAU1 212 aa21.85■■□□□ 1.09
PTCH1-210ENST00000468211 OR5AK3PQ8NH89 298 aa21.85■■□□□ 1.09
PTCH1-210ENST00000468211 FBXO27Q8NI29 283 aa21.85■■□□□ 1.09
PTCH1-210ENST00000468211 ABHD3Q8WU67 409 aa21.85■■□□□ 1.09
PTCH1-210ENST00000468211 PERPQ96FX8 193 aa21.85■■□□□ 1.09
PTCH1-210ENST00000468211 ZNF395Q9H8N7 513 aaPredicted RBP21.85■■□□□ 1.09
PTCH1-210ENST00000468211 USF3Q68DE3 2245 aa21.84■■□□□ 1.09
PTCH1-210ENST00000468211 NPIPB9F8W1W9 429 aa21.84■■□□□ 1.09
PTCH1-210ENST00000468211 NTN1O95631 604 aa21.84■■□□□ 1.09
PTCH1-210ENST00000468211 ATP6V1C1P21283 382 aa21.84■■□□□ 1.09
PTCH1-210ENST00000468211 ZNF239Q16600 458 aaKnown RBP21.84■■□□□ 1.09
PTCH1-210ENST00000468211 CLEC9AQ6UXN8 241 aa21.84■■□□□ 1.09
PTCH1-210ENST00000468211 OR56A1Q8NGH5 318 aa21.84■■□□□ 1.09
PTCH1-210ENST00000468211 ADAMTS15Q8TE58 950 aa21.84■■□□□ 1.09
PTCH1-210ENST00000468211 IGFBPL1Q8WX77 278 aa21.84■■□□□ 1.09
PTCH1-210ENST00000468211 Q96MF0 132 aa21.84■■□□□ 1.09
PTCH1-210ENST00000468211 GLRX2Q9NS18 164 aa21.84■■□□□ 1.09
PTCH1-210ENST00000468211 TLN2Q9Y4G6 2542 aa21.83■■□□□ 1.09
PTCH1-210ENST00000468211 ZNF195O14628 629 aa21.83■■□□□ 1.09
PTCH1-210ENST00000468211 DDX5P17844 614 aaKnown RBP21.83■■□□□ 1.09
PTCH1-210ENST00000468211 EIF1P41567 113 aaKnown RBP21.83■■□□□ 1.09
PTCH1-210ENST00000468211 P2RX1P51575 399 aa21.83■■□□□ 1.09
PTCH1-210ENST00000468211 ZNF844Q08AG5 666 aa21.83■■□□□ 1.09
PTCH1-210ENST00000468211 SPDYE7PQ495Y7 208 aa21.83■■□□□ 1.09
PTCH1-210ENST00000468211 BEX5Q5H9J7 111 aa21.83■■□□□ 1.09
PTCH1-210ENST00000468211 C20orf204Q6ZNR8 217 aa21.83■■□□□ 1.09
PTCH1-210ENST00000468211 NUFIP2Q7Z417 695 aaKnown RBP21.83■■□□□ 1.09
PTCH1-210ENST00000468211 MTERF4Q7Z6M4 381 aaKnown RBP21.83■■□□□ 1.09
PTCH1-210ENST00000468211 WFDC8Q8IUA0 241 aa21.83■■□□□ 1.09
PTCH1-210ENST00000468211 HOMEZQ8IX15 550 aa21.83■■□□□ 1.09
PTCH1-210ENST00000468211 OR5D16Q8NGK9 328 aa21.83■■□□□ 1.09
PTCH1-210ENST00000468211 GPR119Q8TDV5 335 aa21.83■■□□□ 1.09
PTCH1-210ENST00000468211 RNF128Q8TEB7 428 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms