RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 USP36Q9P275 1121 aaKnown RBP13.7□□□□□ -0.22
PRPF38B-204ENST00000467302 IL20RAQ9UHF4 553 aa13.7□□□□□ -0.22
PRPF38B-204ENST00000467302 ADAM30Q9UKF2 790 aa13.7□□□□□ -0.22
PRPF38B-204ENST00000467302 ISM1B1AKI9 464 aa13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 ERVH48-1M5A8F1 160 aa13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 RNF13O43567 381 aa13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 NARSO43776 548 aaKnown RBP13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 ORC5O43913 435 aa13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 ASGR2P07307 311 aa13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 PEBP1P30086 187 aaKnown RBP13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 TSFMP43897 325 aaKnown RBP13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 MTNR1BP49286 362 aa13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 AGFG1P52594 562 aaKnown RBP13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 RRAS2P62070 204 aaPredicted RBP13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 TFF2Q03403 129 aa13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 CAMK2BQ13554 666 aa13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 COL9A2Q14055 689 aaPredicted RBP13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 LTB4RQ15722 352 aa13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 SMARCD3Q6STE5 483 aa13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 FRRS1Q6ZNA5 592 aa13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 AMIGO1Q86WK6 493 aa13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 OR4E2Q8NGC2 313 aa13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 C17orf50Q8WW18 174 aa13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 HMGB4Q8WW32 186 aa13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 LCN9Q8WX39 176 aa13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 KAT2AQ92830 837 aa13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 OTULINQ96BN8 352 aa13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 SAMD8Q96LT4 415 aa13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 UBQLN3Q9H347 655 aa13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 NLGN3Q9NZ94 848 aa13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 OR6C2Q9NZP2 312 aa13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 APOBEC3BQ9UH17 382 aaKnown RBP13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 PCOLCE2Q9UKZ9 415 aa13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 SIRT4Q9Y6E7 314 aaPredicted RBP13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 LRP4O75096 1905 aa13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 A0A0G2JMP0 313 aa13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 LOC102723532A0A0G2JNH3 316 aa13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 CPNE3O75131 537 aaKnown RBP13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 RGS9O75916 674 aaPredicted RBP13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 RASGRP1O95267 797 aa13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 ZGLP1P0C6A0 271 aa13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 ATP6V1E1P36543 226 aa13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 ACTR1BP42025 376 aa13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 ACTR1AP61163 376 aa13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 CCL4L1Q8NHW4 92 aa13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 CREB3L1Q96BA8 519 aa13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 PHF7Q9BWX1 381 aaPredicted RBP13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 GTPBP2Q9BX10 602 aaKnown RBP13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 TMEM168Q9H0V1 697 aa13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 C6orf106Q9H6K1 298 aaPredicted RBP13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 TRIM45Q9H8W5 580 aaPredicted RBP13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 CYSLTR2Q9NS75 346 aa13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 MCUBQ9NWR8 336 aa13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 BABAM2Q9NXR7 383 aa13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 ING3Q9NXR8 418 aa13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 H2AFY2Q9P0M6 372 aaPredicted RBP13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 NTMQ9P121 344 aa13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 PHF11Q9UIL8 331 aa13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 ZNF443Q9Y2A4 671 aaPredicted RBP13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 HS3ST3A1Q9Y663 406 aa13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 GOLGA4Q13439 2230 aaKnown RBP13.69□□□□□ -0.22
PRPF38B-204ENST00000467302 A0A0X1KG70 313 aa13.68□□□□□ -0.22
PRPF38B-204ENST00000467302 GSAPA4D1B5 854 aa13.68□□□□□ -0.22
PRPF38B-204ENST00000467302 FAM183AA6NL82 134 aa13.68□□□□□ -0.22
PRPF38B-204ENST00000467302 C10orf142B7Z368 130 aa13.68□□□□□ -0.22
PRPF38B-204ENST00000467302 HRO43593 1189 aa13.68□□□□□ -0.22
PRPF38B-204ENST00000467302 IGLV3-19P01714 112 aa13.68□□□□□ -0.22
PRPF38B-204ENST00000467302 CHRNB1P11230 501 aa13.68□□□□□ -0.22
PRPF38B-204ENST00000467302 SLC6A1P30531 599 aa13.68□□□□□ -0.22
PRPF38B-204ENST00000467302 GCGRP47871 477 aa13.68□□□□□ -0.22
PRPF38B-204ENST00000467302 RAB8AP61006 207 aa13.68□□□□□ -0.22
PRPF38B-204ENST00000467302 SRP54P61011 504 aaKnown RBP13.68□□□□□ -0.22
PRPF38B-204ENST00000467302 GPLD1P80108 840 aa13.68□□□□□ -0.22
PRPF38B-204ENST00000467302 FAM214AQ32MH5 1076 aa13.68□□□□□ -0.22
PRPF38B-204ENST00000467302 PUS10Q3MIT2 529 aaKnown RBP13.68□□□□□ -0.22
PRPF38B-204ENST00000467302 LAMTOR1Q6IAA8 161 aa13.68□□□□□ -0.22
PRPF38B-204ENST00000467302 CHRDL2Q6WN34 429 aa13.68□□□□□ -0.22
PRPF38B-204ENST00000467302 CXXC5Q7LFL8 322 aaKnown RBP13.68□□□□□ -0.22
PRPF38B-204ENST00000467302 GID4Q8IVV7 300 aa13.68□□□□□ -0.22
PRPF38B-204ENST00000467302 CADM2Q8N3J6 435 aa13.68□□□□□ -0.22
PRPF38B-204ENST00000467302 ACBD7Q8N6N7 88 aa13.68□□□□□ -0.22
PRPF38B-204ENST00000467302 SLC16A11Q8NCK7 471 aa13.68□□□□□ -0.22
PRPF38B-204ENST00000467302 SRFBP1Q8NEF9 429 aaKnown RBP13.68□□□□□ -0.22
PRPF38B-204ENST00000467302 OR4M2Q8NGB6 313 aa13.68□□□□□ -0.22
PRPF38B-204ENST00000467302 OR51G2Q8NGK0 314 aa13.68□□□□□ -0.22
PRPF38B-204ENST00000467302 BRIX1Q8TDN6 353 aaKnown RBP13.68□□□□□ -0.22
PRPF38B-204ENST00000467302 KCNN2Q9H2S1 579 aa13.68□□□□□ -0.22
PRPF38B-204ENST00000467302 PRO3102Q9H379 93 aa13.68□□□□□ -0.22
PRPF38B-204ENST00000467302 SLC2A4RGQ9NR83 387 aa13.68□□□□□ -0.22
PRPF38B-204ENST00000467302 ZNF624Q9P2J8 865 aaPredicted RBP13.68□□□□□ -0.22
PRPF38B-204ENST00000467302 SLC7A7Q9UM01 511 aa13.68□□□□□ -0.22
PRPF38B-204ENST00000467302 TRBV23OR9-2A0A075B6M9 112 aa13.68□□□□□ -0.22
PRPF38B-204ENST00000467302 NOTOA8MTQ0 251 aa13.68□□□□□ -0.22
PRPF38B-204ENST00000467302 TNFRSF10AO00220 468 aa13.68□□□□□ -0.22
PRPF38B-204ENST00000467302 PLOD3O60568 738 aa13.68□□□□□ -0.22
PRPF38B-204ENST00000467302 SRFP11831 508 aa13.68□□□□□ -0.22
PRPF38B-204ENST00000467302 FXYD6P3P58550 94 aa13.68□□□□□ -0.22
PRPF38B-204ENST00000467302 CSTF1Q05048 431 aaKnown RBP13.68□□□□□ -0.22
PRPF38B-204ENST00000467302 CCDC58Q4VC31 144 aa13.68□□□□□ -0.22
PRPF38B-204ENST00000467302 HBMQ6B0K9 141 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms