RNA–Protein interactions for RNA: ENST00000466763.5

UBA3-209, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-209ENST00000466763 LRRTM2O43300 516 aa12.61□□□□□ -0.39
UBA3-209ENST00000466763 HNRNPCL1O60812 293 aaKnown RBP12.61□□□□□ -0.39
UBA3-209ENST00000466763 SHOX2O60902 331 aaPredicted RBP12.61□□□□□ -0.39
UBA3-209ENST00000466763 HNRNPCL4P0DMR1 293 aa12.61□□□□□ -0.39
UBA3-209ENST00000466763 ESRRAP11474 423 aaPredicted RBP12.61□□□□□ -0.39
UBA3-209ENST00000466763 GPX2P18283 190 aa12.61□□□□□ -0.39
UBA3-209ENST00000466763 ENDOUP21128 410 aaKnown RBP12.61□□□□□ -0.39
UBA3-209ENST00000466763 SLC6A2P23975 617 aa12.61□□□□□ -0.39
UBA3-209ENST00000466763 CDK6Q00534 326 aa12.61□□□□□ -0.39
UBA3-209ENST00000466763 ZNF117Q03924 483 aa12.61□□□□□ -0.39
UBA3-209ENST00000466763 ART3Q13508 389 aa12.61□□□□□ -0.39
UBA3-209ENST00000466763 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.61□□□□□ -0.39
UBA3-209ENST00000466763 GXYLT1Q4G148 440 aa12.61□□□□□ -0.39
UBA3-209ENST00000466763 RABL3Q5HYI8 236 aa12.61□□□□□ -0.39
UBA3-209ENST00000466763 CBLN3Q6UW01 205 aa12.61□□□□□ -0.39
UBA3-209ENST00000466763 ARSKQ6UWY0 536 aa12.61□□□□□ -0.39
UBA3-209ENST00000466763 EIF3MQ7L2H7 374 aaKnown RBP12.61□□□□□ -0.39
UBA3-209ENST00000466763 FJX1Q86VR8 437 aa12.61□□□□□ -0.39
UBA3-209ENST00000466763 CCDC197Q8NCU1 140 aa12.61□□□□□ -0.39
UBA3-209ENST00000466763 OR52P1PQ8NH57 321 aa12.61□□□□□ -0.39
UBA3-209ENST00000466763 OR10A6Q8NH74 314 aa12.61□□□□□ -0.39
UBA3-209ENST00000466763 FAM57AQ8TBR7 257 aa12.61□□□□□ -0.39
UBA3-209ENST00000466763 WDR60Q8WVS4 1066 aa12.61□□□□□ -0.39
UBA3-209ENST00000466763 ABTB1Q969K4 478 aaPredicted RBP12.61□□□□□ -0.39
UBA3-209ENST00000466763 ECSITQ9BQ95 431 aa12.61□□□□□ -0.39
UBA3-209ENST00000466763 EFCAB1Q9HAE3 211 aa12.61□□□□□ -0.39
UBA3-209ENST00000466763 PNPLA3Q9NST1 481 aa12.61□□□□□ -0.39
UBA3-209ENST00000466763 ZNF232Q9UNY5 417 aa12.61□□□□□ -0.39
UBA3-209ENST00000466763 CAMK2AQ9UQM7 478 aa12.61□□□□□ -0.39
UBA3-209ENST00000466763 L3MBTL1Q9Y468 752 aa12.61□□□□□ -0.39
UBA3-209ENST00000466763 DIDO1Q9BTC0 2240 aaKnown RBP12.61□□□□□ -0.39
UBA3-209ENST00000466763 IGLV3-32A0A0A0MS00 114 aa12.6□□□□□ -0.39
UBA3-209ENST00000466763 OR14I1A6ND48 311 aa12.6□□□□□ -0.39
UBA3-209ENST00000466763 AGAP5A6NIR3 686 aa12.6□□□□□ -0.39
UBA3-209ENST00000466763 CLDN24A6NM45 220 aa12.6□□□□□ -0.39
UBA3-209ENST00000466763 SHISA8B8ZZ34 492 aa12.6□□□□□ -0.39
UBA3-209ENST00000466763 NDUFAB1O14561 156 aa12.6□□□□□ -0.39
UBA3-209ENST00000466763 ZIC3O60481 467 aa12.6□□□□□ -0.39
UBA3-209ENST00000466763 EIF4E2O60573 245 aaKnown RBP12.6□□□□□ -0.39
UBA3-209ENST00000466763 AGFG2O95081 481 aa12.6□□□□□ -0.39
UBA3-209ENST00000466763 NPPAP01160 153 aa12.6□□□□□ -0.39
UBA3-209ENST00000466763 DBIP07108 87 aaKnown RBP12.6□□□□□ -0.39
UBA3-209ENST00000466763 GUSBP08236 651 aa12.6□□□□□ -0.39
UBA3-209ENST00000466763 STSP08842 583 aa12.6□□□□□ -0.39
UBA3-209ENST00000466763 ARAFP10398 606 aa12.6□□□□□ -0.39
UBA3-209ENST00000466763 BMP2P12643 396 aa12.6□□□□□ -0.39
UBA3-209ENST00000466763 BMP7P18075 431 aa12.6□□□□□ -0.39
UBA3-209ENST00000466763 CPA2P48052 419 aa12.6□□□□□ -0.39
UBA3-209ENST00000466763 STARP49675 285 aa12.6□□□□□ -0.39
UBA3-209ENST00000466763 NUDT2P50583 147 aa12.6□□□□□ -0.39
UBA3-209ENST00000466763 P2RX1P51575 399 aa12.6□□□□□ -0.39
UBA3-209ENST00000466763 KCNJ10P78508 379 aa12.6□□□□□ -0.39
UBA3-209ENST00000466763 SRYQ05066 204 aa12.6□□□□□ -0.39
UBA3-209ENST00000466763 SCARB2Q14108 478 aa12.6□□□□□ -0.39
UBA3-209ENST00000466763 FGFBP1Q14512 234 aa12.6□□□□□ -0.39
UBA3-209ENST00000466763 GANABQ14697 944 aaKnown RBP12.6□□□□□ -0.39
UBA3-209ENST00000466763 MAPK11Q15759 364 aa12.6□□□□□ -0.39
UBA3-209ENST00000466763 REEP3Q6NUK4 255 aa12.6□□□□□ -0.39
UBA3-209ENST00000466763 AAGABQ6PD74 315 aa12.6□□□□□ -0.39
UBA3-209ENST00000466763 VRK2Q86Y07 508 aa12.6□□□□□ -0.39
UBA3-209ENST00000466763 DOLPP1Q86YN1 238 aa12.6□□□□□ -0.39
UBA3-209ENST00000466763 CHERPQ8IWX8 916 aaKnown RBP12.6□□□□□ -0.39
UBA3-209ENST00000466763 TOR1AIP2Q8NFQ8 470 aa12.6□□□□□ -0.39
UBA3-209ENST00000466763 BBS10Q8TAM1 723 aa12.6□□□□□ -0.39
UBA3-209ENST00000466763 SMPDL3BQ92485 455 aa12.6□□□□□ -0.39
UBA3-209ENST00000466763 ARSGQ96EG1 525 aa12.6□□□□□ -0.39
UBA3-209ENST00000466763 TREX2Q9BQ50 279 aaPredicted RBP12.6□□□□□ -0.39
UBA3-209ENST00000466763 UGT2B28Q9BY64 529 aa12.6□□□□□ -0.39
UBA3-209ENST00000466763 SUCOQ9UBS9 1254 aaKnown RBP12.6□□□□□ -0.39
UBA3-209ENST00000466763 SLC35A3Q9Y2D2 325 aa12.6□□□□□ -0.39
UBA3-209ENST00000466763 ZNF835Q9Y2P0 537 aa12.6□□□□□ -0.39
UBA3-209ENST00000466763 HEATR5AQ86XA9 2040 aa12.6□□□□□ -0.39
UBA3-209ENST00000466763 A0A1B0GUH1 482 aa12.59□□□□□ -0.39
UBA3-209ENST00000466763 PGM3O95394 542 aa12.59□□□□□ -0.39
UBA3-209ENST00000466763 AQP1P29972 269 aa12.59□□□□□ -0.39
UBA3-209ENST00000466763 PRDX6P30041 224 aa12.59□□□□□ -0.39
UBA3-209ENST00000466763 RYKP34925 604 aa12.59□□□□□ -0.39
UBA3-209ENST00000466763 CA7P43166 264 aa12.59□□□□□ -0.39
UBA3-209ENST00000466763 LARS2Q15031 903 aaKnown RBP12.59□□□□□ -0.39
UBA3-209ENST00000466763 LIN52Q52LA3 116 aa12.59□□□□□ -0.39
UBA3-209ENST00000466763 ZNF311Q5JNZ3 666 aa12.59□□□□□ -0.39
UBA3-209ENST00000466763 VASNQ6EMK4 673 aa12.59□□□□□ -0.39
UBA3-209ENST00000466763 ENPP6Q6UWR7 440 aa12.59□□□□□ -0.39
UBA3-209ENST00000466763 KRT73Q86Y46 540 aa12.59□□□□□ -0.39
UBA3-209ENST00000466763 METTL25Q8N6Q8 603 aa12.59□□□□□ -0.39
UBA3-209ENST00000466763 ANKS4BQ8N8V4 417 aa12.59□□□□□ -0.39
UBA3-209ENST00000466763 C11orf65Q8NCR3 313 aa12.59□□□□□ -0.39
UBA3-209ENST00000466763 OR8J3Q8NGG0 315 aa12.59□□□□□ -0.39
UBA3-209ENST00000466763 OR5W2Q8NH69 310 aa12.59□□□□□ -0.39
UBA3-209ENST00000466763 ZNF563Q8TA94 476 aa12.59□□□□□ -0.39
UBA3-209ENST00000466763 BCAS4Q8TDM0 211 aa12.59□□□□□ -0.39
UBA3-209ENST00000466763 CNOT9Q92600 299 aaKnown RBP12.59□□□□□ -0.39
UBA3-209ENST00000466763 PMM1Q92871 262 aa12.59□□□□□ -0.39
UBA3-209ENST00000466763 TIMP4Q99727 224 aa12.59□□□□□ -0.39
UBA3-209ENST00000466763 KLHDC3Q9BQ90 382 aa12.59□□□□□ -0.39
UBA3-209ENST00000466763 PIGQQ9BRB3 760 aa12.59□□□□□ -0.39
UBA3-209ENST00000466763 LAT2Q9GZY6 243 aa12.59□□□□□ -0.39
UBA3-209ENST00000466763 TMEM38AQ9H6F2 299 aa12.59□□□□□ -0.39
UBA3-209ENST00000466763 KAT8Q9H7Z6 458 aaKnown RBP12.59□□□□□ -0.39
UBA3-209ENST00000466763 MED17Q9NVC6 651 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms