RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 NR5A2O00482 541 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 CXCR6O00574 342 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 PIRO00625 290 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 HS6ST1O60243 411 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 MPZL2O60487 215 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 CREG1O75629 220 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 SLC25A12O75746 678 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 SLC22A5O76082 557 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 PDE9AO76083 593 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 MFN2O95140 757 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 KAT7O95251 611 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 PEX11BO96011 259 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 GLUD1P00367 558 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 PNPP00491 289 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 CST1P01037 141 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 IL1AP01583 271 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 ITGB3P05106 788 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 LGALS2P05162 132 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 HOXD4P09016 255 aaPredicted RBP3.2□□□□□ -1.9
SORT1-202ENST00000466471 CTPS1P17812 591 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 GALP22466 123 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 CFL1P23528 166 aaKnown RBP3.2□□□□□ -1.9
SORT1-202ENST00000466471 CPT2P23786 658 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 PTPN6P29350 595 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 TNFSF8P32971 234 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 PTGER1P34995 402 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 SOX6P35712 828 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 GGT2P36268 569 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 SLC1A2P43004 574 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 ETV1P50549 477 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 NKX2-5P52952 324 aaPredicted RBP3.2□□□□□ -1.9
SORT1-202ENST00000466471 ATXN3P54252 364 aaPredicted RBP3.2□□□□□ -1.9
SORT1-202ENST00000466471 DIO3P55073 304 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 CLDN20P56880 219 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 FAM189BP81408 668 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 MRPS6P82932 125 aaKnown RBP3.2□□□□□ -1.9
SORT1-202ENST00000466471 TFAMQ00059 246 aaKnown RBP3.2□□□□□ -1.9
SORT1-202ENST00000466471 SP2Q02086 613 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 SEMG2Q02383 582 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 HHEXQ03014 270 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 NPRL3Q12980 569 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 MAD2L1Q13257 205 aaPredicted RBP3.2□□□□□ -1.9
SORT1-202ENST00000466471 IL13RA2Q14627 380 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 NCF4Q15080 339 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 ZNF79Q15937 498 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 IMPG1Q17R60 797 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 HYAL4Q2M3T9 481 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 GOLGA7BQ2TAP0 167 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 SETMARQ53H47 684 aaPredicted RBP3.2□□□□□ -1.9
SORT1-202ENST00000466471 KRBOX4Q5JUW0 171 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 SPANXN2Q5MJ10 180 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 OTUD3Q5T2D3 398 aaPredicted RBP3.2□□□□□ -1.9
SORT1-202ENST00000466471 SERTAD4-AS1Q5TG53 156 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 HACD4Q5VWC8 232 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 MEDAGQ5VYS4 303 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 NXNL2Q5VZ03 156 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 B3GNTL1Q67FW5 361 aaPredicted RBP3.2□□□□□ -1.9
SORT1-202ENST00000466471 OR2T5Q6IEZ7 315 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 NEK5Q6P3R8 708 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 SCYL2Q6P3W7 929 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 MTFR2Q6P444 385 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 CES3Q6UWW8 571 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 TMEM107Q6UX40 140 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 KIAA1324Q6UXG2 1013 aaKnown RBP3.2□□□□□ -1.9
SORT1-202ENST00000466471 TFAP2EQ6VUC0 442 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 SLC24A5Q71RS6 500 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 TRILQ7L0X0 811 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 PRSS45Q7RTY3 260 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 GDF7Q7Z4P5 450 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 TMEM179BQ7Z7N9 219 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 TMPRSS12Q86WS5 348 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 SNX29P2Q8IUI4 249 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 LINC00346Q8IVM7 164 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 DENND6AQ8IWF6 608 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 MSRB3Q8IXL7 192 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 MICU2Q8IYU8 434 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 ENTHD1Q8IYW4 607 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 SLC22A15Q8IZD6 547 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 FAM9CQ8IZT9 166 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 CYP4Z2PQ8N1L4 340 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 DNAAF3Q8N9W5 541 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 FNDC5Q8NAU1 212 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 ZNF248Q8NDW4 579 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 FAM83FQ8NEG4 500 aaPredicted RBP3.2□□□□□ -1.9
SORT1-202ENST00000466471 OR2T12Q8NG77 320 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 OR4M1Q8NGD0 313 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 OR5H6Q8NGV6 325 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 OR2T29Q8NH02 315 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 LILRB1Q8NHL6 650 aaPredicted RBP3.2□□□□□ -1.9
SORT1-202ENST00000466471 MOSPD2Q8NHP6 518 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 UBA3Q8TBC4 463 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 ANKRD49Q8WVL7 239 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 DEDD2Q8WXF8 326 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 PIGKQ92643 395 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 KCNJ9Q92806 393 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 GGHQ92820 318 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 ELSPBP1Q96BH3 223 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 PTERQ96BW5 349 aa3.2□□□□□ -1.9
SORT1-202ENST00000466471 MMABQ96EY8 250 aaPredicted RBP3.2□□□□□ -1.9
SORT1-202ENST00000466471 IGSF21Q96ID5 467 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms