RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 REEP4Q9H6H4 257 aa16.75■□□□□ 0.27
SRSF4-202ENST00000466448 LRTM1Q9HBL6 345 aa16.75■□□□□ 0.27
SRSF4-202ENST00000466448 C1orf109Q9NX04 203 aa16.75■□□□□ 0.27
SRSF4-202ENST00000466448 KLHL13Q9P2N7 655 aa16.75■□□□□ 0.27
SRSF4-202ENST00000466448 TBK1Q9UHD2 729 aa16.75■□□□□ 0.27
SRSF4-202ENST00000466448 MAGED1Q9Y5V3 778 aaPredicted RBP16.75■□□□□ 0.27
SRSF4-202ENST00000466448 USF3Q68DE3 2245 aa16.74■□□□□ 0.27
SRSF4-202ENST00000466448 PCNX3Q9H6A9 2034 aa16.74■□□□□ 0.27
SRSF4-202ENST00000466448 A0A1W2PPM1 405 aa16.74■□□□□ 0.27
SRSF4-202ENST00000466448 A0A1W2PQD3 144 aa16.74■□□□□ 0.27
SRSF4-202ENST00000466448 EFNA2O43921 213 aa16.74■□□□□ 0.27
SRSF4-202ENST00000466448 TBX19O60806 448 aa16.74■□□□□ 0.27
SRSF4-202ENST00000466448 PROCP04070 461 aa16.74■□□□□ 0.27
SRSF4-202ENST00000466448 CD3EP07766 207 aa16.74■□□□□ 0.27
SRSF4-202ENST00000466448 SDC1P18827 310 aa16.74■□□□□ 0.27
SRSF4-202ENST00000466448 IL32P24001 234 aa16.74■□□□□ 0.27
SRSF4-202ENST00000466448 EIF1P41567 113 aaKnown RBP16.74■□□□□ 0.27
SRSF4-202ENST00000466448 SERPINB4P48594 390 aa16.74■□□□□ 0.27
SRSF4-202ENST00000466448 NAA20P61599 178 aa16.74■□□□□ 0.27
SRSF4-202ENST00000466448 ZNF117Q03924 483 aa16.74■□□□□ 0.27
SRSF4-202ENST00000466448 PDE7AQ13946 482 aa16.74■□□□□ 0.27
SRSF4-202ENST00000466448 RNPS1Q15287 305 aaKnown RBP16.74■□□□□ 0.27
SRSF4-202ENST00000466448 EXOSC6Q5RKV6 272 aaKnown RBP16.74■□□□□ 0.27
SRSF4-202ENST00000466448 SFRP5Q5T4F7 317 aa16.74■□□□□ 0.27
SRSF4-202ENST00000466448 TUSC5Q8IXB3 177 aa16.74■□□□□ 0.27
SRSF4-202ENST00000466448 OR2T11Q8NH01 316 aa16.74■□□□□ 0.27
SRSF4-202ENST00000466448 SMAP2Q8WU79 429 aaPredicted RBP16.74■□□□□ 0.27
SRSF4-202ENST00000466448 GTPBP3Q969Y2 492 aaKnown RBP16.74■□□□□ 0.27
SRSF4-202ENST00000466448 CPNE4Q96A23 557 aaPredicted RBP16.74■□□□□ 0.27
SRSF4-202ENST00000466448 REXO5Q96IC2 774 aaKnown RBP16.74■□□□□ 0.27
SRSF4-202ENST00000466448 FCRL1Q96LA6 429 aa16.74■□□□□ 0.27
SRSF4-202ENST00000466448 TSSK3Q96PN8 268 aa16.74■□□□□ 0.27
SRSF4-202ENST00000466448 ESRP2Q9H6T0 727 aaKnown RBP16.74■□□□□ 0.27
SRSF4-202ENST00000466448 GLRA3O75311 464 aa16.73■□□□□ 0.27
SRSF4-202ENST00000466448 ALOX5P09917 674 aa16.73■□□□□ 0.27
SRSF4-202ENST00000466448 ELK4P28324 431 aa16.73■□□□□ 0.27
SRSF4-202ENST00000466448 ADH6P28332 368 aa16.73■□□□□ 0.27
SRSF4-202ENST00000466448 IDUAP35475 653 aa16.73■□□□□ 0.27
SRSF4-202ENST00000466448 ACVR1BP36896 505 aa16.73■□□□□ 0.27
SRSF4-202ENST00000466448 DNAJB13P59910 316 aa16.73■□□□□ 0.27
SRSF4-202ENST00000466448 ZNF672Q499Z4 452 aaPredicted RBP16.73■□□□□ 0.27
SRSF4-202ENST00000466448 CFAP157Q5JU67 520 aa16.73■□□□□ 0.27
SRSF4-202ENST00000466448 SEZ6L2Q6UXD5 910 aa16.73■□□□□ 0.27
SRSF4-202ENST00000466448 Q6ZSR9 355 aa16.73■□□□□ 0.27
SRSF4-202ENST00000466448 BANPQ8N9N5 519 aa16.73■□□□□ 0.27
SRSF4-202ENST00000466448 CLHC1Q8NHS4 586 aa16.73■□□□□ 0.27
SRSF4-202ENST00000466448 HSD17B8Q92506 261 aa16.73■□□□□ 0.27
SRSF4-202ENST00000466448 JADE3Q92613 823 aa16.73■□□□□ 0.27
SRSF4-202ENST00000466448 KISS1RQ969F8 398 aaPredicted RBP16.73■□□□□ 0.27
SRSF4-202ENST00000466448 SLCO5A1Q9H2Y9 848 aa16.73■□□□□ 0.27
SRSF4-202ENST00000466448 NGBQ9NPG2 151 aa16.73■□□□□ 0.27
SRSF4-202ENST00000466448 TIGARQ9NQ88 270 aa16.73■□□□□ 0.27
SRSF4-202ENST00000466448 ACSS1Q9NUB1 689 aaPredicted RBP16.73■□□□□ 0.27
SRSF4-202ENST00000466448 SH3BP4Q9P0V3 963 aa16.73■□□□□ 0.27
SRSF4-202ENST00000466448 BAIAP2L1Q9UHR4 511 aa16.73■□□□□ 0.27
SRSF4-202ENST00000466448 LIPT1Q9Y234 373 aa16.73■□□□□ 0.27
SRSF4-202ENST00000466448 SNX8Q9Y5X2 465 aa16.73■□□□□ 0.27
SRSF4-202ENST00000466448 HEATR5AQ86XA9 2040 aa16.72■□□□□ 0.27
SRSF4-202ENST00000466448 CUBNO60494 3623 aa16.72■□□□□ 0.27
SRSF4-202ENST00000466448 SLC28A1O00337 649 aa16.72■□□□□ 0.27
SRSF4-202ENST00000466448 OIP5O43482 229 aa16.72■□□□□ 0.27
SRSF4-202ENST00000466448 RGS14O43566 566 aa16.72■□□□□ 0.27
SRSF4-202ENST00000466448 ADAP00813 363 aa16.72■□□□□ 0.27
SRSF4-202ENST00000466448 IGHV4-39P01824 125 aa16.72■□□□□ 0.27
SRSF4-202ENST00000466448 EFNA1P20827 205 aaPredicted RBP16.72■□□□□ 0.27
SRSF4-202ENST00000466448 RNF144AP50876 292 aaPredicted RBP16.72■□□□□ 0.27
SRSF4-202ENST00000466448 RPL38P63173 70 aaKnown RBP16.72■□□□□ 0.27
SRSF4-202ENST00000466448 BSPH1Q075Z2 132 aa16.72■□□□□ 0.27
SRSF4-202ENST00000466448 RFTN2Q52LD8 501 aaPredicted RBP16.72■□□□□ 0.27
SRSF4-202ENST00000466448 ZCCHC12Q6PEW1 402 aa16.72■□□□□ 0.27
SRSF4-202ENST00000466448 CBLN3Q6UW01 205 aa16.72■□□□□ 0.27
SRSF4-202ENST00000466448 FCRLAQ7L513 359 aa16.72■□□□□ 0.27
SRSF4-202ENST00000466448 MNS1Q8NEH6 495 aa16.72■□□□□ 0.27
SRSF4-202ENST00000466448 KBTBD8Q8NFY9 601 aa16.72■□□□□ 0.27
SRSF4-202ENST00000466448 FBXO27Q8NI29 283 aa16.72■□□□□ 0.27
SRSF4-202ENST00000466448 FAM120BQ96EK7 910 aaKnown RBP16.72■□□□□ 0.27
SRSF4-202ENST00000466448 BTBD2Q9BX70 525 aa16.72■□□□□ 0.27
SRSF4-202ENST00000466448 GP6Q9HCN6 339 aa16.72■□□□□ 0.27
SRSF4-202ENST00000466448 OXSMQ9NWU1 459 aa16.72■□□□□ 0.27
SRSF4-202ENST00000466448 ICAM5Q9UMF0 924 aa16.72■□□□□ 0.27
SRSF4-202ENST00000466448 A0A1W2PP18 115 aa16.71■□□□□ 0.27
SRSF4-202ENST00000466448 ZNF814B7Z6K7 855 aa16.71■□□□□ 0.27
SRSF4-202ENST00000466448 ZNF195O14628 629 aa16.71■□□□□ 0.27
SRSF4-202ENST00000466448 PLIN3O60664 434 aa16.71■□□□□ 0.27
SRSF4-202ENST00000466448 NDUFS7O75251 213 aa16.71■□□□□ 0.27
SRSF4-202ENST00000466448 PRKD3O94806 890 aa16.71■□□□□ 0.27
SRSF4-202ENST00000466448 HSPA4LO95757 839 aa16.71■□□□□ 0.27
SRSF4-202ENST00000466448 TP53P04637 393 aaPredicted RBP16.71■□□□□ 0.27
SRSF4-202ENST00000466448 HMGN2P05204 90 aaKnown RBP16.71■□□□□ 0.27
SRSF4-202ENST00000466448 THBS1P07996 1170 aa16.71■□□□□ 0.27
SRSF4-202ENST00000466448 POU6F2P78424 691 aaPredicted RBP16.71■□□□□ 0.27
SRSF4-202ENST00000466448 FAPQ12884 760 aa16.71■□□□□ 0.27
SRSF4-202ENST00000466448 P2RY6Q15077 328 aa16.71■□□□□ 0.27
SRSF4-202ENST00000466448 PGGHGQ32M88 737 aa16.71■□□□□ 0.27
SRSF4-202ENST00000466448 DNM1P46Q6ZS02 220 aa16.71■□□□□ 0.27
SRSF4-202ENST00000466448 PIWIL2Q8TC59 973 aaKnown RBP16.71■□□□□ 0.27
SRSF4-202ENST00000466448 PHOSPHO1Q8TCT1 267 aa16.71■□□□□ 0.27
SRSF4-202ENST00000466448 CDS1Q92903 461 aa16.71■□□□□ 0.27
SRSF4-202ENST00000466448 TRIM44Q96DX7 344 aaPredicted RBP16.71■□□□□ 0.27
SRSF4-202ENST00000466448 POTEKPQ9BYX7 375 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms