RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 C20orf141Q9NUB4 165 aa17.02■□□□□ 0.31
SYNE4-204ENST00000465425 WDR70Q9NW82 654 aa17.02■□□□□ 0.31
SYNE4-204ENST00000465425 BABAM2Q9NXR7 383 aa17.02■□□□□ 0.31
SYNE4-204ENST00000465425 ACTR10Q9NZ32 417 aa17.02■□□□□ 0.31
SYNE4-204ENST00000465425 LOC105369274A0A096LPK9 316 aa17.01■□□□□ 0.31
SYNE4-204ENST00000465425 NPIPA5A0A0B4J1W7 369 aa17.01■□□□□ 0.31
SYNE4-204ENST00000465425 LOC102723532A0A0G2JNH3 316 aa17.01■□□□□ 0.31
SYNE4-204ENST00000465425 DAPL1A0PJW8 107 aa17.01■□□□□ 0.31
SYNE4-204ENST00000465425 ZC3H12DA2A288 527 aaKnown RBP17.01■□□□□ 0.31
SYNE4-204ENST00000465425 FAM25AB3EWG3 89 aa17.01■□□□□ 0.31
SYNE4-204ENST00000465425 FAM25CB3EWG5 89 aa17.01■□□□□ 0.31
SYNE4-204ENST00000465425 FAM25GB3EWG6 89 aa17.01■□□□□ 0.31
SYNE4-204ENST00000465425 NPIPA7E9PJI5 369 aa17.01■□□□□ 0.31
SYNE4-204ENST00000465425 J3QRE1 110 aa17.01■□□□□ 0.31
SYNE4-204ENST00000465425 GTPBP1O00178 669 aaKnown RBP17.01■□□□□ 0.31
SYNE4-204ENST00000465425 BHLHE40O14503 412 aa17.01■□□□□ 0.31
SYNE4-204ENST00000465425 RCBTB2O95199 551 aa17.01■□□□□ 0.31
SYNE4-204ENST00000465425 ATP1B1P05026 303 aa17.01■□□□□ 0.31
SYNE4-204ENST00000465425 NPIPA8P0DM63 369 aa17.01■□□□□ 0.31
SYNE4-204ENST00000465425 PSKH1P11801 424 aa17.01■□□□□ 0.31
SYNE4-204ENST00000465425 PTBP1P26599 531 aaKnown RBP eCLIP17.01■□□□□ 0.315e-8■■■■□ 19.5
SYNE4-204ENST00000465425 ZNF362Q5T0B9 420 aaPredicted RBP17.01■□□□□ 0.31
SYNE4-204ENST00000465425 FCRL6Q6DN72 434 aa17.01■□□□□ 0.31
SYNE4-204ENST00000465425 RPL13AP3Q6NVV1 102 aa17.01■□□□□ 0.31
SYNE4-204ENST00000465425 OR4N4Q8N0Y3 316 aa17.01■□□□□ 0.31
SYNE4-204ENST00000465425 SLC7A6Q92536 515 aa17.01■□□□□ 0.31
SYNE4-204ENST00000465425 IFT27Q9BW83 186 aa17.01■□□□□ 0.31
SYNE4-204ENST00000465425 LYRM4Q9HD34 91 aa17.01■□□□□ 0.31
SYNE4-204ENST00000465425 TRIM36Q9NQ86 728 aa17.01■□□□□ 0.31
SYNE4-204ENST00000465425 TMEM74BQ9NUR3 256 aa17.01■□□□□ 0.31
SYNE4-204ENST00000465425 NUFIP1Q9UHK0 495 aaKnown RBP17.01■□□□□ 0.31
SYNE4-204ENST00000465425 PCDHGB7Q9Y5F8 929 aa17.01■□□□□ 0.31
SYNE4-204ENST00000465425 REV3LO60673 3130 aa17.01■□□□□ 0.31
SYNE4-204ENST00000465425 DNAH14Q0VDD8 3507 aa17.01■□□□□ 0.31
SYNE4-204ENST00000465425 A0A1W2PQF6 199 aa17.01■□□□□ 0.31
SYNE4-204ENST00000465425 CDHR4A6H8M9 788 aa17.01■□□□□ 0.31
SYNE4-204ENST00000465425 FAM47E-STBD1D6RA91 191 aa17.01■□□□□ 0.31
SYNE4-204ENST00000465425 HLA-DQB1P01920 261 aa17.01■□□□□ 0.31
SYNE4-204ENST00000465425 COL9A1P20849 921 aa17.01■□□□□ 0.31
SYNE4-204ENST00000465425 RPS4Y1P22090 263 aaKnown RBP17.01■□□□□ 0.31
SYNE4-204ENST00000465425 BMP8BP34820 402 aa17.01■□□□□ 0.31
SYNE4-204ENST00000465425 FXYD6P3P58550 94 aa17.01■□□□□ 0.31
SYNE4-204ENST00000465425 FHL5Q5TD97 284 aa17.01■□□□□ 0.31
SYNE4-204ENST00000465425 FIGNL1Q6PIW4 674 aa17.01■□□□□ 0.31
SYNE4-204ENST00000465425 TMEM91Q6ZNR0 172 aa17.01■□□□□ 0.31
SYNE4-204ENST00000465425 BMP8AQ7Z5Y6 402 aa17.01■□□□□ 0.31
SYNE4-204ENST00000465425 ZNF784Q8NCA9 323 aaPredicted RBP17.01■□□□□ 0.31
SYNE4-204ENST00000465425 OR10H4Q8NGA5 316 aa17.01■□□□□ 0.31
SYNE4-204ENST00000465425 SOSTQ9BQB4 213 aa17.01■□□□□ 0.31
SYNE4-204ENST00000465425 SYNDIG1Q9H7V2 258 aa17.01■□□□□ 0.31
SYNE4-204ENST00000465425 ZNF223Q9UK11 482 aaPredicted RBP17.01■□□□□ 0.31
SYNE4-204ENST00000465425 SCML1Q9UN30 329 aa17.01■□□□□ 0.31
SYNE4-204ENST00000465425 DOCK8Q8NF50 2099 aa17■□□□□ 0.31
SYNE4-204ENST00000465425 A0A087WV62 115 aa17■□□□□ 0.31
SYNE4-204ENST00000465425 SYNDIG1LA6NDD5 238 aa17■□□□□ 0.31
SYNE4-204ENST00000465425 PRR23D1E9PI22 279 aaPredicted RBP17■□□□□ 0.31
SYNE4-204ENST00000465425 FGF17O60258 216 aa17■□□□□ 0.31
SYNE4-204ENST00000465425 SLC19A2O60779 497 aa17■□□□□ 0.31
SYNE4-204ENST00000465425 KLF8O95600 359 aaPredicted RBP17■□□□□ 0.31
SYNE4-204ENST00000465425 PRR23D2P0DMB1 279 aaPredicted RBP17■□□□□ 0.31
SYNE4-204ENST00000465425 FZD5Q13467 585 aa17■□□□□ 0.31
SYNE4-204ENST00000465425 GPR18Q14330 331 aa17■□□□□ 0.31
SYNE4-204ENST00000465425 LSRQ86X29 649 aaPredicted RBP17■□□□□ 0.31
SYNE4-204ENST00000465425 LNX2Q8N448 690 aa17■□□□□ 0.31
SYNE4-204ENST00000465425 ZNF655Q8N720 491 aaPredicted RBP17■□□□□ 0.31
SYNE4-204ENST00000465425 ASB12Q8WXK4 309 aa17■□□□□ 0.31
SYNE4-204ENST00000465425 TP53INP1Q96A56 240 aa17■□□□□ 0.31
SYNE4-204ENST00000465425 BPIFA2Q96DR5 249 aa17■□□□□ 0.31
SYNE4-204ENST00000465425 STACQ99469 402 aa17■□□□□ 0.31
SYNE4-204ENST00000465425 TTYH2Q9BSA4 534 aa17■□□□□ 0.31
SYNE4-204ENST00000465425 RBFOX1Q9NWB1 397 aaKnown RBP17■□□□□ 0.31
SYNE4-204ENST00000465425 FBXO34Q9NWN3 711 aa17■□□□□ 0.31
SYNE4-204ENST00000465425 CLDND1Q9NY35 253 aa17■□□□□ 0.31
SYNE4-204ENST00000465425 TMEM5Q9Y2B1 443 aa17■□□□□ 0.31
SYNE4-204ENST00000465425 MED31Q9Y3C7 131 aa17■□□□□ 0.31
SYNE4-204ENST00000465425 RANBP2P49792 3224 aaKnown RBP17■□□□□ 0.31
SYNE4-204ENST00000465425 SLC22A31A6NKX4 558 aa16.99■□□□□ 0.31
SYNE4-204ENST00000465425 H0YGG7 62 aa16.99■□□□□ 0.31
SYNE4-204ENST00000465425 PLOD3O60568 738 aa16.99■□□□□ 0.31
SYNE4-204ENST00000465425 ARF3P61204 181 aaPredicted RBP16.99■□□□□ 0.31
SYNE4-204ENST00000465425 PRSS41Q7RTY9 318 aa16.99■□□□□ 0.31
SYNE4-204ENST00000465425 TMEM99Q8N816 258 aa16.99■□□□□ 0.31
SYNE4-204ENST00000465425 ZFPM2Q8WW38 1151 aa16.99■□□□□ 0.31
SYNE4-204ENST00000465425 ACOT12Q8WYK0 555 aa16.99■□□□□ 0.31
SYNE4-204ENST00000465425 CDCA3Q99618 268 aaPredicted RBP16.99■□□□□ 0.31
SYNE4-204ENST00000465425 RNF32Q9H0A6 362 aa16.99■□□□□ 0.31
SYNE4-204ENST00000465425 ENKD1Q9H0I2 346 aa16.99■□□□□ 0.31
SYNE4-204ENST00000465425 RANGRFQ9HD47 186 aaPredicted RBP16.99■□□□□ 0.31
SYNE4-204ENST00000465425 PILRAQ9UKJ1 303 aa16.99■□□□□ 0.31
SYNE4-204ENST00000465425 FMO6PO60774 539 aa16.99■□□□□ 0.31
SYNE4-204ENST00000465425 APBB3O95704 486 aa16.99■□□□□ 0.31
SYNE4-204ENST00000465425 AK1P00568 194 aa16.99■□□□□ 0.31
SYNE4-204ENST00000465425 TBXA2RP21731 343 aa16.99■□□□□ 0.31
SYNE4-204ENST00000465425 MLLT3P42568 568 aaPredicted RBP16.99■□□□□ 0.31
SYNE4-204ENST00000465425 SHC2P98077 582 aa16.99■□□□□ 0.31
SYNE4-204ENST00000465425 FOXK2Q01167 660 aa16.99■□□□□ 0.31
SYNE4-204ENST00000465425 ADAM15Q13444 863 aa16.99■□□□□ 0.31
SYNE4-204ENST00000465425 GALEQ14376 348 aa16.99■□□□□ 0.31
SYNE4-204ENST00000465425 EXOSC7Q15024 291 aaKnown RBP16.99■□□□□ 0.31
SYNE4-204ENST00000465425 IDNKQ5T6J7 187 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms