RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 MAL2Q969L2 176 aa15.4■□□□□ 0.06
USP39-211ENST00000465282 ZG16BQ96DA0 208 aa15.4■□□□□ 0.06
USP39-211ENST00000465282 SPATA5L1Q9BVQ7 753 aa15.4■□□□□ 0.06
USP39-211ENST00000465282 LAT2Q9GZY6 243 aa15.4■□□□□ 0.06
USP39-211ENST00000465282 L3MBTL1Q9Y468 752 aa15.4■□□□□ 0.06
USP39-211ENST00000465282 C7orf72A4D263 438 aa15.39■□□□□ 0.05
USP39-211ENST00000465282 FAM47E-STBD1D6RA91 191 aa15.39■□□□□ 0.05
USP39-211ENST00000465282 PRRG2O14669 202 aa15.39■□□□□ 0.05
USP39-211ENST00000465282 ZIC3O60481 467 aa15.39■□□□□ 0.05
USP39-211ENST00000465282 SLC19A2O60779 497 aa15.39■□□□□ 0.05
USP39-211ENST00000465282 STSP08842 583 aa15.39■□□□□ 0.05
USP39-211ENST00000465282 NID1P14543 1247 aa15.39■□□□□ 0.05
USP39-211ENST00000465282 ABOP16442 354 aa15.39■□□□□ 0.05
USP39-211ENST00000465282 GNLYP22749 145 aa15.39■□□□□ 0.05
USP39-211ENST00000465282 CHMP24386 653 aa15.39■□□□□ 0.05
USP39-211ENST00000465282 ZNF117Q03924 483 aa15.39■□□□□ 0.05
USP39-211ENST00000465282 MRPL49Q13405 166 aaKnown RBP15.39■□□□□ 0.05
USP39-211ENST00000465282 SCARB2Q14108 478 aa15.39■□□□□ 0.05
USP39-211ENST00000465282 AAGABQ6PD74 315 aa15.39■□□□□ 0.05
USP39-211ENST00000465282 CHERPQ8IWX8 916 aaKnown RBP15.39■□□□□ 0.05
USP39-211ENST00000465282 C10orf111Q8N326 155 aa15.39■□□□□ 0.05
USP39-211ENST00000465282 FAM71CQ8NEG0 241 aa15.39■□□□□ 0.05
USP39-211ENST00000465282 OR52P1PQ8NH57 321 aa15.39■□□□□ 0.05
USP39-211ENST00000465282 OR10A6Q8NH74 314 aa15.39■□□□□ 0.05
USP39-211ENST00000465282 WDR60Q8WVS4 1066 aa15.39■□□□□ 0.05
USP39-211ENST00000465282 ZBTB8AQ96BR9 441 aa15.39■□□□□ 0.05
USP39-211ENST00000465282 ARSGQ96EG1 525 aa15.39■□□□□ 0.05
USP39-211ENST00000465282 ZNF607Q96SK3 696 aa15.39■□□□□ 0.05
USP39-211ENST00000465282 GPATCH1Q9BRR8 931 aaKnown RBP15.39■□□□□ 0.05
USP39-211ENST00000465282 SLC39A3Q9BRY0 314 aa15.39■□□□□ 0.05
USP39-211ENST00000465282 EXOSC3Q9NQT5 275 aaKnown RBP15.39■□□□□ 0.05
USP39-211ENST00000465282 TAGLN3Q9UI15 199 aa15.39■□□□□ 0.05
USP39-211ENST00000465282 ICAM5Q9UMF0 924 aa15.39■□□□□ 0.05
USP39-211ENST00000465282 ANGPT4Q9Y264 503 aa15.39■□□□□ 0.05
USP39-211ENST00000465282 CARD8Q9Y2G2 431 aa15.39■□□□□ 0.05
USP39-211ENST00000465282 HELZ2Q9BYK8 2649 aaKnown RBP15.39■□□□□ 0.05
USP39-211ENST00000465282 GCN1Q92616 2671 aaKnown RBP15.38■□□□□ 0.05
USP39-211ENST00000465282 B4DXG7 233 aa15.38■□□□□ 0.05
USP39-211ENST00000465282 DNAJA2O60884 412 aa15.38■□□□□ 0.05
USP39-211ENST00000465282 SERPINB7O75635 380 aa15.38■□□□□ 0.05
USP39-211ENST00000465282 ZNF17P17021 662 aa15.38■□□□□ 0.05
USP39-211ENST00000465282 PGM1P36871 562 aa15.38■□□□□ 0.05
USP39-211ENST00000465282 EIF1P41567 113 aaKnown RBP15.38■□□□□ 0.05
USP39-211ENST00000465282 NUDT2P50583 147 aa15.38■□□□□ 0.05
USP39-211ENST00000465282 ZNF41P51814 821 aaPredicted RBP15.38■□□□□ 0.05
USP39-211ENST00000465282 SELPLGQ14242 412 aa15.38■□□□□ 0.05
USP39-211ENST00000465282 LIN52Q52LA3 116 aa15.38■□□□□ 0.05
USP39-211ENST00000465282 RABL3Q5HYI8 236 aa15.38■□□□□ 0.05
USP39-211ENST00000465282 INTS11Q5TA45 600 aaKnown RBP15.38■□□□□ 0.05
USP39-211ENST00000465282 VASNQ6EMK4 673 aa15.38■□□□□ 0.05
USP39-211ENST00000465282 C8orf82Q6P1X6 216 aaPredicted RBP15.38■□□□□ 0.05
USP39-211ENST00000465282 ERICH5Q6P6B1 374 aa15.38■□□□□ 0.05
USP39-211ENST00000465282 OLIG3Q7RTU3 272 aa15.38■□□□□ 0.05
USP39-211ENST00000465282 YRDCQ86U90 279 aaKnown RBP15.38■□□□□ 0.05
USP39-211ENST00000465282 CALHM3Q86XJ0 350 aa15.38■□□□□ 0.05
USP39-211ENST00000465282 PTOV1Q86YD1 416 aa15.38■□□□□ 0.05
USP39-211ENST00000465282 GRAMD2AQ8IUY3 354 aa15.38■□□□□ 0.05
USP39-211ENST00000465282 ZNF440Q8IYI8 595 aa15.38■□□□□ 0.05
USP39-211ENST00000465282 EID3Q8N140 333 aa15.38■□□□□ 0.05
USP39-211ENST00000465282 FITM2Q8N6M3 262 aa15.38■□□□□ 0.05
USP39-211ENST00000465282 BHLHE22Q8NFJ8 381 aaPredicted RBP15.38■□□□□ 0.05
USP39-211ENST00000465282 OR5W2Q8NH69 310 aa15.38■□□□□ 0.05
USP39-211ENST00000465282 NFKBIDQ8NI38 313 aa15.38■□□□□ 0.05
USP39-211ENST00000465282 FAM57AQ8TBR7 257 aa15.38■□□□□ 0.05
USP39-211ENST00000465282 SLC35B4Q969S0 331 aa15.38■□□□□ 0.05
USP39-211ENST00000465282 REXO5Q96IC2 774 aaKnown RBP15.38■□□□□ 0.05
USP39-211ENST00000465282 PIGQQ9BRB3 760 aa15.38■□□□□ 0.05
USP39-211ENST00000465282 SLC6A15Q9H2J7 730 aa15.38■□□□□ 0.05
USP39-211ENST00000465282 NDE1Q9NXR1 346 aa15.38■□□□□ 0.05
USP39-211ENST00000465282 STOML1Q9UBI4 398 aa15.38■□□□□ 0.05
USP39-211ENST00000465282 HRH3Q9Y5N1 445 aa15.38■□□□□ 0.05
USP39-211ENST00000465282 LIPGQ9Y5X9 500 aa15.38■□□□□ 0.05
USP39-211ENST00000465282 CENPVL1A0A0U1RR11 272 aa15.37■□□□□ 0.05
USP39-211ENST00000465282 A0A1B0GUH1 482 aa15.37■□□□□ 0.05
USP39-211ENST00000465282 HOXD4P09016 255 aaPredicted RBP15.37■□□□□ 0.05
USP39-211ENST00000465282 HK1P19367 917 aa15.37■□□□□ 0.05
USP39-211ENST00000465282 ADH6P28332 368 aa15.37■□□□□ 0.05
USP39-211ENST00000465282 PCGF2P35227 344 aa15.37■□□□□ 0.05
USP39-211ENST00000465282 SLC6A8P48029 635 aa15.37■□□□□ 0.05
USP39-211ENST00000465282 GZMMP51124 257 aa15.37■□□□□ 0.05
USP39-211ENST00000465282 GFRA1P56159 465 aa15.37■□□□□ 0.05
USP39-211ENST00000465282 HSF1Q00613 529 aa15.37■□□□□ 0.05
USP39-211ENST00000465282 SKP2Q13309 424 aa15.37■□□□□ 0.05
USP39-211ENST00000465282 CBFBQ13951 182 aa15.37■□□□□ 0.05
USP39-211ENST00000465282 VEZF1Q14119 521 aa15.37■□□□□ 0.05
USP39-211ENST00000465282 SF3B4Q15427 424 aaKnown RBP eCLIP15.37■□□□□ 0.05
USP39-211ENST00000465282 BCL2A1Q16548 175 aa15.37■□□□□ 0.05
USP39-211ENST00000465282 EIPR1Q53HC9 387 aa15.37■□□□□ 0.05
USP39-211ENST00000465282 WIPI1Q5MNZ9 446 aaPredicted RBP15.37■□□□□ 0.05
USP39-211ENST00000465282 WLSQ5T9L3 541 aa15.37■□□□□ 0.05
USP39-211ENST00000465282 RNF220Q5VTB9 566 aa15.37■□□□□ 0.05
USP39-211ENST00000465282 CBLN3Q6UW01 205 aa15.37■□□□□ 0.05
USP39-211ENST00000465282 ENPP6Q6UWR7 440 aa15.37■□□□□ 0.05
USP39-211ENST00000465282 FGD2Q7Z6J4 655 aa15.37■□□□□ 0.05
USP39-211ENST00000465282 PM20D2Q8IYS1 436 aa15.37■□□□□ 0.05
USP39-211ENST00000465282 PRR7Q8TB68 274 aa15.37■□□□□ 0.05
USP39-211ENST00000465282 ABTB1Q969K4 478 aaPredicted RBP15.37■□□□□ 0.05
USP39-211ENST00000465282 SH3YL1Q96HL8 342 aaPredicted RBP15.37■□□□□ 0.05
USP39-211ENST00000465282 TRIM8Q9BZR9 551 aa15.37■□□□□ 0.05
USP39-211ENST00000465282 QRSL1Q9H0R6 528 aaKnown RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms