RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 GKN3PP0CG01 181 aa10.78□□□□□ -0.68
APTX-213ENST00000465003 UBL4AP11441 157 aa10.78□□□□□ -0.68
APTX-213ENST00000465003 BMP2P12643 396 aa10.78□□□□□ -0.68
APTX-213ENST00000465003 EDN3P14138 238 aa10.78□□□□□ -0.68
APTX-213ENST00000465003 PPIBP23284 216 aaKnown RBP10.78□□□□□ -0.68
APTX-213ENST00000465003 GZMMP51124 257 aa10.78□□□□□ -0.68
APTX-213ENST00000465003 TPD52P55327 224 aaPredicted RBP10.78□□□□□ -0.68
APTX-213ENST00000465003 HOXC5Q00444 222 aa10.78□□□□□ -0.68
APTX-213ENST00000465003 C17orf67Q0P5P2 114 aa10.78□□□□□ -0.68
APTX-213ENST00000465003 ZNF141Q15928 474 aa10.78□□□□□ -0.68
APTX-213ENST00000465003 HYAL4Q2M3T9 481 aa10.78□□□□□ -0.68
APTX-213ENST00000465003 MRPL2Q5T653 305 aaKnown RBP10.78□□□□□ -0.68
APTX-213ENST00000465003 RAET1LQ5VY80 246 aa10.78□□□□□ -0.68
APTX-213ENST00000465003 POMZP3Q6PJE2 187 aa10.78□□□□□ -0.68
APTX-213ENST00000465003 ZNF836Q6ZNA1 936 aa10.78□□□□□ -0.68
APTX-213ENST00000465003 GHDCQ8N2G8 530 aa10.78□□□□□ -0.68
APTX-213ENST00000465003 CLIP4Q8N3C7 705 aa10.78□□□□□ -0.68
APTX-213ENST00000465003 RPRMLQ8N4K4 120 aa10.78□□□□□ -0.68
APTX-213ENST00000465003 FAM156AQ8NDB6 213 aa10.78□□□□□ -0.68
APTX-213ENST00000465003 OR52P1PQ8NH57 321 aa10.78□□□□□ -0.68
APTX-213ENST00000465003 CNOT9Q92600 299 aaKnown RBP10.78□□□□□ -0.68
APTX-213ENST00000465003 DNAJA3Q96EY1 480 aa10.78□□□□□ -0.68
APTX-213ENST00000465003 RAD21L1Q9H4I0 556 aa10.78□□□□□ -0.68
APTX-213ENST00000465003 TMEM185BQ9H7F4 350 aa10.78□□□□□ -0.68
APTX-213ENST00000465003 EFCAB1Q9HAE3 211 aa10.78□□□□□ -0.68
APTX-213ENST00000465003 GID8Q9NWU2 228 aa10.78□□□□□ -0.68
APTX-213ENST00000465003 ALKBH4Q9NXW9 302 aa10.78□□□□□ -0.68
APTX-213ENST00000465003 TAGLN3Q9UI15 199 aa10.78□□□□□ -0.68
APTX-213ENST00000465003 CHST2Q9Y4C5 530 aa10.78□□□□□ -0.68
APTX-213ENST00000465003 DSPPQ9NZW4 1301 aa10.78□□□□□ -0.68
APTX-213ENST00000465003 TMEM247A6NEH6 219 aa10.77□□□□□ -0.68
APTX-213ENST00000465003 KDM4EB2RXH2 506 aaPredicted RBP10.77□□□□□ -0.68
APTX-213ENST00000465003 ZIC3O60481 467 aa10.77□□□□□ -0.68
APTX-213ENST00000465003 TPST1O60507 370 aa10.77□□□□□ -0.68
APTX-213ENST00000465003 SLC19A2O60779 497 aa10.77□□□□□ -0.68
APTX-213ENST00000465003 GCM2O75603 506 aaPredicted RBP10.77□□□□□ -0.68
APTX-213ENST00000465003 TPOP07202 933 aa10.77□□□□□ -0.68
APTX-213ENST00000465003 NGFRP08138 427 aa10.77□□□□□ -0.68
APTX-213ENST00000465003 ABOP16442 354 aa10.77□□□□□ -0.68
APTX-213ENST00000465003 TCN1P20061 433 aaPredicted RBP10.77□□□□□ -0.68
APTX-213ENST00000465003 MSX2P35548 267 aaPredicted RBP10.77□□□□□ -0.68
APTX-213ENST00000465003 KCNJ10P78508 379 aa10.77□□□□□ -0.68
APTX-213ENST00000465003 MXRA7P84157 204 aa10.77□□□□□ -0.68
APTX-213ENST00000465003 SRYQ05066 204 aa10.77□□□□□ -0.68
APTX-213ENST00000465003 SKP2Q13309 424 aa10.77□□□□□ -0.68
APTX-213ENST00000465003 FGFBP1Q14512 234 aa10.77□□□□□ -0.68
APTX-213ENST00000465003 CD163Q86VB7 1156 aa10.77□□□□□ -0.68
APTX-213ENST00000465003 SLC15A3Q8IY34 581 aa10.77□□□□□ -0.68
APTX-213ENST00000465003 ST6GALNAC3Q8NDV1 305 aa10.77□□□□□ -0.68
APTX-213ENST00000465003 OR10Q1Q8NGQ4 319 aa10.77□□□□□ -0.68
APTX-213ENST00000465003 B4GALNT2Q8NHY0 566 aa10.77□□□□□ -0.68
APTX-213ENST00000465003 WDR60Q8WVS4 1066 aa10.77□□□□□ -0.68
APTX-213ENST00000465003 SMPDL3BQ92485 455 aa10.77□□□□□ -0.68
APTX-213ENST00000465003 C1GALT1C1Q96EU7 318 aa10.77□□□□□ -0.68
APTX-213ENST00000465003 ZNF583Q96ND8 569 aa10.77□□□□□ -0.68
APTX-213ENST00000465003 WFDC6Q9BQY6 131 aa10.77□□□□□ -0.68
APTX-213ENST00000465003 GPATCH1Q9BRR8 931 aaKnown RBP10.77□□□□□ -0.68
APTX-213ENST00000465003 PNPLA3Q9NST1 481 aa10.77□□□□□ -0.68
APTX-213ENST00000465003 ICAM5Q9UMF0 924 aa10.77□□□□□ -0.68
APTX-213ENST00000465003 CORO2BQ9UQ03 480 aa10.77□□□□□ -0.68
APTX-213ENST00000465003 TRGV8A0A0C4DH27 118 aa10.77□□□□□ -0.69
APTX-213ENST00000465003 A0A1W2PQD3 144 aa10.77□□□□□ -0.69
APTX-213ENST00000465003 H3BML4 177 aa10.77□□□□□ -0.69
APTX-213ENST00000465003 AP3D1O14617 1153 aa10.77□□□□□ -0.69
APTX-213ENST00000465003 ZNF264O43296 627 aa10.77□□□□□ -0.69
APTX-213ENST00000465003 HPNP05981 417 aa10.77□□□□□ -0.69
APTX-213ENST00000465003 PRG2P13727 222 aa10.77□□□□□ -0.69
APTX-213ENST00000465003 HK1P19367 917 aa10.77□□□□□ -0.69
APTX-213ENST00000465003 IL11P20809 199 aa10.77□□□□□ -0.69
APTX-213ENST00000465003 RPS4Y1P22090 263 aaKnown RBP10.77□□□□□ -0.69
APTX-213ENST00000465003 PGM1P36871 562 aa10.77□□□□□ -0.69
APTX-213ENST00000465003 ELOAQ14241 798 aaKnown RBP10.77□□□□□ -0.69
APTX-213ENST00000465003 REEP3Q6NUK4 255 aa10.77□□□□□ -0.69
APTX-213ENST00000465003 UBQLNLQ8IYU4 475 aa10.77□□□□□ -0.69
APTX-213ENST00000465003 OR8J3Q8NGG0 315 aa10.77□□□□□ -0.69
APTX-213ENST00000465003 NEIL3Q8TAT5 605 aa10.77□□□□□ -0.69
APTX-213ENST00000465003 HOXD1Q9GZZ0 328 aa10.77□□□□□ -0.69
APTX-213ENST00000465003 SDHAF3Q9NRP4 125 aa10.77□□□□□ -0.69
APTX-213ENST00000465003 PLSCR2Q9NRY7 297 aa10.77□□□□□ -0.69
APTX-213ENST00000465003 ZNF443Q9Y2A4 671 aaPredicted RBP10.77□□□□□ -0.69
APTX-213ENST00000465003 HIVEP3Q5T1R4 2406 aa10.77□□□□□ -0.69
APTX-213ENST00000465003 GCN1Q92616 2671 aaKnown RBP10.77□□□□□ -0.69
APTX-213ENST00000465003 FLNCQ14315 2725 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 J3QKU1 62 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 UBOX5O94941 541 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 SOX30O94993 753 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 IGHG3P01860 377 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 T-ENOLP0DO92 83 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 PEPDP12955 493 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 PRDX6P30041 224 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 SRD5A2P31213 254 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 CRYBA2P53672 197 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 PSME3P61289 254 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 FOXF1Q12946 379 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 ZNF311Q5JNZ3 666 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 C8orf82Q6P1X6 216 aaPredicted RBP10.76□□□□□ -0.69
APTX-213ENST00000465003 ARHGAP11AQ6P4F7 1023 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 FJX1Q86VR8 437 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 ATCAYQ86WG3 371 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 PEX5LQ8IYB4 626 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms