RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 IGKV6D-21A0A0A0MT36 114 aa4□□□□□ -1.77
PTCD3-205ENST00000464541 SAGE2PA6NJ88 616 aa4□□□□□ -1.77
PTCD3-205ENST00000464541 CASKO14936 926 aa4□□□□□ -1.77
PTCD3-205ENST00000464541 ANGPT2O15123 496 aa4□□□□□ -1.77
PTCD3-205ENST00000464541 EMC8O43402 210 aa4□□□□□ -1.77
PTCD3-205ENST00000464541 ZNF254O75437 659 aa4□□□□□ -1.77
PTCD3-205ENST00000464541 SCRG1O75711 98 aa4□□□□□ -1.77
PTCD3-205ENST00000464541 GSTT2P0CG29 244 aa4□□□□□ -1.77
PTCD3-205ENST00000464541 GSTT2BP0CG30 244 aa4□□□□□ -1.77
PTCD3-205ENST00000464541 TSPY4P0CV99 314 aa4□□□□□ -1.77
PTCD3-205ENST00000464541 TSPY10P0CW01 314 aa4□□□□□ -1.77
PTCD3-205ENST00000464541 RRASP10301 218 aa4□□□□□ -1.77
PTCD3-205ENST00000464541 ETS1P14921 441 aa4□□□□□ -1.77
PTCD3-205ENST00000464541 DHPSP49366 369 aaPredicted RBP4□□□□□ -1.77
PTCD3-205ENST00000464541 GBX2P52951 348 aaPredicted RBP4□□□□□ -1.77
PTCD3-205ENST00000464541 ACTR1AP61163 376 aa4□□□□□ -1.77
PTCD3-205ENST00000464541 VLDLRP98155 873 aa4□□□□□ -1.77
PTCD3-205ENST00000464541 RIPK1Q13546 671 aa4□□□□□ -1.77
PTCD3-205ENST00000464541 ELAVL3Q14576 367 aaKnown RBP4□□□□□ -1.77
PTCD3-205ENST00000464541 MAJINQ3KP22 176 aa4□□□□□ -1.77
PTCD3-205ENST00000464541 RABL6Q3YEC7 729 aaPredicted RBP4□□□□□ -1.77
PTCD3-205ENST00000464541 CCDC14Q49A88 953 aa4□□□□□ -1.77
PTCD3-205ENST00000464541 PVRIGQ6DKI7 326 aa4□□□□□ -1.77
PTCD3-205ENST00000464541 SLC39A4Q6P5W5 647 aa4□□□□□ -1.77
PTCD3-205ENST00000464541 AFTPHQ6ULP2 937 aa4□□□□□ -1.77
PTCD3-205ENST00000464541 CXCL17Q6UXB2 119 aa4□□□□□ -1.77
PTCD3-205ENST00000464541 ANGPTL8Q6UXH0 198 aa4□□□□□ -1.77
PTCD3-205ENST00000464541 Q6ZVH6 145 aa4□□□□□ -1.77
PTCD3-205ENST00000464541 NBPF5PQ86XG9 351 aaPredicted RBP4□□□□□ -1.77
PTCD3-205ENST00000464541 CERS5Q8N5B7 392 aa4□□□□□ -1.77
PTCD3-205ENST00000464541 STKLD1Q8NE28 680 aa4□□□□□ -1.77
PTCD3-205ENST00000464541 OR9A4Q8NGU2 314 aa4□□□□□ -1.77
PTCD3-205ENST00000464541 GIPC3Q8TF64 312 aa4□□□□□ -1.77
PTCD3-205ENST00000464541 ELSPBP1Q96BH3 223 aa4□□□□□ -1.77
PTCD3-205ENST00000464541 SAMD8Q96LT4 415 aa4□□□□□ -1.77
PTCD3-205ENST00000464541 ZNF184Q99676 751 aaPredicted RBP4□□□□□ -1.77
PTCD3-205ENST00000464541 SLC30A2Q9BRI3 323 aa4□□□□□ -1.77
PTCD3-205ENST00000464541 CNPY3Q9BT09 278 aa4□□□□□ -1.77
PTCD3-205ENST00000464541 SLC25A51Q9H1U9 297 aa4□□□□□ -1.77
PTCD3-205ENST00000464541 ROPN1Q9HAT0 212 aaPredicted RBP4□□□□□ -1.77
PTCD3-205ENST00000464541 ONECUT1Q9UBC0 465 aa4□□□□□ -1.77
PTCD3-205ENST00000464541 CYTH4Q9UIA0 394 aa4□□□□□ -1.77
PTCD3-205ENST00000464541 CRLS1Q9UJA2 301 aa4□□□□□ -1.77
PTCD3-205ENST00000464541 CUX2O14529 1486 aa3.99□□□□□ -1.77
PTCD3-205ENST00000464541 ZSCAN5BA6NJL1 495 aa3.99□□□□□ -1.77
PTCD3-205ENST00000464541 HSPA5P11021 654 aaKnown RBP3.99□□□□□ -1.77
PTCD3-205ENST00000464541 GCFC2P16383 781 aaKnown RBP3.99□□□□□ -1.77
PTCD3-205ENST00000464541 CCND2P30279 289 aa3.99□□□□□ -1.77
PTCD3-205ENST00000464541 SSR1P43307 286 aaKnown RBP3.99□□□□□ -1.77
PTCD3-205ENST00000464541 GNPDA1P46926 289 aa3.99□□□□□ -1.77
PTCD3-205ENST00000464541 RPL29P47914 159 aaKnown RBP3.99□□□□□ -1.77
PTCD3-205ENST00000464541 GNB2P62879 340 aa3.99□□□□□ -1.77
PTCD3-205ENST00000464541 RPL8P62917 257 aaKnown RBP3.99□□□□□ -1.77
PTCD3-205ENST00000464541 MRPS11P82912 194 aaKnown RBP3.99□□□□□ -1.77
PTCD3-205ENST00000464541 ZNF45Q02386 682 aa3.99□□□□□ -1.77
PTCD3-205ENST00000464541 ORC2Q13416 577 aaPredicted RBP3.99□□□□□ -1.77
PTCD3-205ENST00000464541 EXOSC2Q13868 293 aaKnown RBP3.99□□□□□ -1.77
PTCD3-205ENST00000464541 RIPPLY2Q5TAB7 128 aa3.99□□□□□ -1.77
PTCD3-205ENST00000464541 SLC25A24Q6NUK1 477 aa3.99□□□□□ -1.77
PTCD3-205ENST00000464541 SCYL2Q6P3W7 929 aa3.99□□□□□ -1.77
PTCD3-205ENST00000464541 BCORP1Q8N888 145 aa3.99□□□□□ -1.77
PTCD3-205ENST00000464541 OR10H4Q8NGA5 316 aa3.99□□□□□ -1.77
PTCD3-205ENST00000464541 ANKRD49Q8WVL7 239 aa3.99□□□□□ -1.77
PTCD3-205ENST00000464541 GIMAP1Q8WWP7 306 aa3.99□□□□□ -1.77
PTCD3-205ENST00000464541 ARNTL2Q8WYA1 636 aa3.99□□□□□ -1.77
PTCD3-205ENST00000464541 IL4I1Q96RQ9 567 aa3.99□□□□□ -1.77
PTCD3-205ENST00000464541 THUMPD2Q9BTF0 503 aaKnown RBP3.99□□□□□ -1.77
PTCD3-205ENST00000464541 TBCDQ9BTW9 1192 aa3.99□□□□□ -1.77
PTCD3-205ENST00000464541 CCSER1Q9C0I3 900 aa3.99□□□□□ -1.77
PTCD3-205ENST00000464541 RAB17Q9H0T7 212 aa3.99□□□□□ -1.77
PTCD3-205ENST00000464541 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.99□□□□□ -1.77
PTCD3-205ENST00000464541 NMRK1Q9NWW6 199 aa3.99□□□□□ -1.77
PTCD3-205ENST00000464541 TMOD2Q9NZR1 351 aa3.99□□□□□ -1.77
PTCD3-205ENST00000464541 TMED5Q9Y3A6 229 aa3.99□□□□□ -1.77
PTCD3-205ENST00000464541 DDX49Q9Y6V7 483 aaKnown RBP3.99□□□□□ -1.77
PTCD3-205ENST00000464541 IGHV7-81A0A0B4J1V7 117 aa3.98□□□□□ -1.77
PTCD3-205ENST00000464541 FAM230AA0A1W2PPH8 454 aa3.98□□□□□ -1.77
PTCD3-205ENST00000464541 CTAGE15A4D2H0 777 aa3.98□□□□□ -1.77
PTCD3-205ENST00000464541 LRRC30A6NM36 301 aa3.98□□□□□ -1.77
PTCD3-205ENST00000464541 IDH1O75874 414 aaKnown RBP3.98□□□□□ -1.77
PTCD3-205ENST00000464541 AKR7A3O95154 331 aa3.98□□□□□ -1.77
PTCD3-205ENST00000464541 ADCY5O95622 1261 aa3.98□□□□□ -1.77
PTCD3-205ENST00000464541 DPP4P27487 766 aa3.98□□□□□ -1.77
PTCD3-205ENST00000464541 ADORA2BP29275 332 aa3.98□□□□□ -1.77
PTCD3-205ENST00000464541 SCGB2A2Q13296 93 aa3.98□□□□□ -1.77
PTCD3-205ENST00000464541 LRRC36Q1X8D7 754 aa3.98□□□□□ -1.77
PTCD3-205ENST00000464541 FAM120AOSQ5T036 256 aa3.98□□□□□ -1.77
PTCD3-205ENST00000464541 WSCD1Q658N2 575 aa3.98□□□□□ -1.77
PTCD3-205ENST00000464541 OR8G2PQ6IF36 304 aa3.98□□□□□ -1.77
PTCD3-205ENST00000464541 SULT1C3Q6IMI6 304 aa3.98□□□□□ -1.77
PTCD3-205ENST00000464541 ISLR2Q6UXK2 745 aa3.98□□□□□ -1.77
PTCD3-205ENST00000464541 HSD17B13Q7Z5P4 300 aaPredicted RBP3.98□□□□□ -1.77
PTCD3-205ENST00000464541 CTAGE6Q86UF2 777 aa3.98□□□□□ -1.77
PTCD3-205ENST00000464541 C17orf82Q86X59 251 aaPredicted RBP3.98□□□□□ -1.77
PTCD3-205ENST00000464541 TGIF2LYQ8IUE0 185 aa3.98□□□□□ -1.77
PTCD3-205ENST00000464541 ERI1Q8IV48 349 aaKnown RBP3.98□□□□□ -1.77
PTCD3-205ENST00000464541 EFCAB13Q8IY85 973 aa3.98□□□□□ -1.77
PTCD3-205ENST00000464541 RNF175Q8N4F7 328 aa3.98□□□□□ -1.77
PTCD3-205ENST00000464541 SLC5A11Q8WWX8 675 aa3.98□□□□□ -1.77
PTCD3-205ENST00000464541 ZNF75CPQ92670 426 aaPredicted RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms