RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 SERTAD2Q14140 314 aa13.43□□□□□ -0.26
COL5A1-205ENST00000464187 GINS1Q14691 196 aa13.43□□□□□ -0.26
COL5A1-205ENST00000464187 TRAM2Q15035 370 aa13.43□□□□□ -0.26
COL5A1-205ENST00000464187 OCLNQ16625 522 aa13.43□□□□□ -0.26
COL5A1-205ENST00000464187 ARHGAP11BQ3KRB8 267 aa13.43□□□□□ -0.26
COL5A1-205ENST00000464187 NKAIN1Q4KMZ8 207 aa13.43□□□□□ -0.26
COL5A1-205ENST00000464187 STPG1Q5TH74 334 aa13.43□□□□□ -0.26
COL5A1-205ENST00000464187 MEDAGQ5VYS4 303 aa13.43□□□□□ -0.26
COL5A1-205ENST00000464187 TYW3Q6IPR3 259 aaKnown RBP13.43□□□□□ -0.26
COL5A1-205ENST00000464187 ACSM5Q6NUN0 579 aa13.43□□□□□ -0.26
COL5A1-205ENST00000464187 QSOX2Q6ZRP7 698 aa13.43□□□□□ -0.26
COL5A1-205ENST00000464187 GALNT12Q8IXK2 581 aa13.43□□□□□ -0.26
COL5A1-205ENST00000464187 CACTIN-AS1Q8N1I8 211 aa13.43□□□□□ -0.26
COL5A1-205ENST00000464187 VWA5B2Q8N398 1253 aa13.43□□□□□ -0.26
COL5A1-205ENST00000464187 S100ZQ8WXG8 99 aa13.43□□□□□ -0.26
COL5A1-205ENST00000464187 RIT1Q92963 219 aa13.43□□□□□ -0.26
COL5A1-205ENST00000464187 DGAT2Q96PD7 388 aa13.43□□□□□ -0.26
COL5A1-205ENST00000464187 TSSK6Q9BXA6 273 aa13.43□□□□□ -0.26
COL5A1-205ENST00000464187 POLDIP3Q9BY77 421 aaKnown RBP13.43□□□□□ -0.26
COL5A1-205ENST00000464187 PLA2G12AQ9BZM1 189 aa13.43□□□□□ -0.26
COL5A1-205ENST00000464187 OR51E2Q9H255 320 aa13.43□□□□□ -0.26
COL5A1-205ENST00000464187 ADAP2Q9NPF8 381 aa13.43□□□□□ -0.26
COL5A1-205ENST00000464187 TVP23BQ9NYZ1 205 aa13.43□□□□□ -0.26
COL5A1-205ENST00000464187 AKAP7Q9P0M2 348 aaPredicted RBP13.43□□□□□ -0.26
COL5A1-205ENST00000464187 CTSFQ9UBX1 484 aa13.43□□□□□ -0.26
COL5A1-205ENST00000464187 MKLN1Q9UL63 735 aa13.43□□□□□ -0.26
COL5A1-205ENST00000464187 NTNG1Q9Y2I2 539 aa13.43□□□□□ -0.26
COL5A1-205ENST00000464187 MMACHCQ9Y4U1 282 aa13.43□□□□□ -0.26
COL5A1-205ENST00000464187 CFAP54Q96N23 3096 aa13.43□□□□□ -0.26
COL5A1-205ENST00000464187 CCNYL3P0C7X3 344 aa13.43□□□□□ -0.26
COL5A1-205ENST00000464187 HSMCR30P0CW71 290 aa13.43□□□□□ -0.26
COL5A1-205ENST00000464187 DBTP11182 482 aaKnown RBP13.43□□□□□ -0.26
COL5A1-205ENST00000464187 BMP4P12644 408 aa13.43□□□□□ -0.26
COL5A1-205ENST00000464187 ZNF12P17014 697 aa13.43□□□□□ -0.26
COL5A1-205ENST00000464187 GSTM3P21266 225 aa13.43□□□□□ -0.26
COL5A1-205ENST00000464187 PCYT1AP49585 367 aa13.43□□□□□ -0.26
COL5A1-205ENST00000464187 RGS8P57771 180 aaPredicted RBP13.43□□□□□ -0.26
COL5A1-205ENST00000464187 DCDP81605 110 aaKnown RBP13.43□□□□□ -0.26
COL5A1-205ENST00000464187 HOXC5Q00444 222 aa13.43□□□□□ -0.26
COL5A1-205ENST00000464187 CDK5Q00535 292 aa13.43□□□□□ -0.26
COL5A1-205ENST00000464187 MED22Q15528 200 aa13.43□□□□□ -0.26
COL5A1-205ENST00000464187 TRIP6Q15654 476 aaKnown RBP13.43□□□□□ -0.26
COL5A1-205ENST00000464187 EXOSC6Q5RKV6 272 aaKnown RBP13.43□□□□□ -0.26
COL5A1-205ENST00000464187 ZNF385CQ66K41 422 aaPredicted RBP13.43□□□□□ -0.26
COL5A1-205ENST00000464187 ZNF836Q6ZNA1 936 aa13.43□□□□□ -0.26
COL5A1-205ENST00000464187 USP43Q70EL4 1123 aa13.43□□□□□ -0.26
COL5A1-205ENST00000464187 PIP4P1Q86T03 277 aa13.43□□□□□ -0.26
COL5A1-205ENST00000464187 PRSS58Q8IYP2 241 aa13.43□□□□□ -0.26
COL5A1-205ENST00000464187 FGF11Q92914 225 aa13.43□□□□□ -0.26
COL5A1-205ENST00000464187 EGLN3Q9H6Z9 239 aa13.43□□□□□ -0.26
COL5A1-205ENST00000464187 TRIM45Q9H8W5 580 aaPredicted RBP13.43□□□□□ -0.26
COL5A1-205ENST00000464187 KLHL28Q9NXS3 571 aa13.43□□□□□ -0.26
COL5A1-205ENST00000464187 ERGIC3Q9Y282 383 aa13.43□□□□□ -0.26
COL5A1-205ENST00000464187 LSM2Q9Y333 95 aaKnown RBP13.43□□□□□ -0.26
COL5A1-205ENST00000464187 WDR45Q9Y484 360 aa13.43□□□□□ -0.26
COL5A1-205ENST00000464187 PCDHGA1Q9Y5H4 931 aa13.43□□□□□ -0.26
COL5A1-205ENST00000464187 CENPVL1A0A0U1RR11 272 aa13.42□□□□□ -0.26
COL5A1-205ENST00000464187 CPNE3O75131 537 aaKnown RBP13.42□□□□□ -0.26
COL5A1-205ENST00000464187 IFNA16P05015 189 aa13.42□□□□□ -0.26
COL5A1-205ENST00000464187 IFI6P09912 130 aa13.42□□□□□ -0.26
COL5A1-205ENST00000464187 RORAP35398 523 aa13.42□□□□□ -0.26
COL5A1-205ENST00000464187 EFNA3P52797 238 aa13.42□□□□□ -0.26
COL5A1-205ENST00000464187 TUBA1BP68363 451 aa13.42□□□□□ -0.26
COL5A1-205ENST00000464187 ST3GAL3Q11203 375 aa13.42□□□□□ -0.26
COL5A1-205ENST00000464187 MAP4K2Q12851 820 aa13.42□□□□□ -0.26
COL5A1-205ENST00000464187 BIKQ13323 160 aa13.42□□□□□ -0.26
COL5A1-205ENST00000464187 EXOSC7Q15024 291 aaKnown RBP13.42□□□□□ -0.26
COL5A1-205ENST00000464187 TSTQ16762 297 aaKnown RBP13.42□□□□□ -0.26
COL5A1-205ENST00000464187 SOWAHCQ53LP3 525 aaPredicted RBP13.42□□□□□ -0.26
COL5A1-205ENST00000464187 C19orf48Q6RUI8 117 aa13.42□□□□□ -0.26
COL5A1-205ENST00000464187 PLEKHM3Q6ZWE6 761 aa13.42□□□□□ -0.26
COL5A1-205ENST00000464187 TUBA1AQ71U36 451 aa13.42□□□□□ -0.26
COL5A1-205ENST00000464187 PRICKLE2Q7Z3G6 844 aa13.42□□□□□ -0.26
COL5A1-205ENST00000464187 LAPTM4BQ86VI4 370 aa13.42□□□□□ -0.26
COL5A1-205ENST00000464187 FAM26EQ8N5C1 309 aa13.42□□□□□ -0.26
COL5A1-205ENST00000464187 GNPDA2Q8TDQ7 276 aa13.42□□□□□ -0.26
COL5A1-205ENST00000464187 TSLPQ969D9 159 aa13.42□□□□□ -0.26
COL5A1-205ENST00000464187 ABTB1Q969K4 478 aaPredicted RBP13.42□□□□□ -0.26
COL5A1-205ENST00000464187 PMEPA1Q969W9 287 aa13.42□□□□□ -0.26
COL5A1-205ENST00000464187 TMEM80Q96HE8 168 aa13.42□□□□□ -0.26
COL5A1-205ENST00000464187 MGLLQ99685 303 aa13.42□□□□□ -0.26
COL5A1-205ENST00000464187 STRADBQ9C0K7 418 aa13.42□□□□□ -0.26
COL5A1-205ENST00000464187 DSN1Q9H410 356 aa13.42□□□□□ -0.26
COL5A1-205ENST00000464187 ANKRD19PQ9H560 264 aa13.42□□□□□ -0.26
COL5A1-205ENST00000464187 RNF167Q9H6Y7 350 aa13.42□□□□□ -0.26
COL5A1-205ENST00000464187 FAIMQ9NVQ4 179 aa13.42□□□□□ -0.26
COL5A1-205ENST00000464187 SLC39A1Q9NY26 324 aa13.42□□□□□ -0.26
COL5A1-205ENST00000464187 MKL2Q9ULH7 1088 aa13.42□□□□□ -0.26
COL5A1-205ENST00000464187 RPL36Q9Y3U8 105 aaKnown RBP13.42□□□□□ -0.26
COL5A1-205ENST00000464187 IGLV3-12A0A075B6K2 115 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 IGKV3D-11A0A0A0MRZ8 115 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 LOC100506127A0A0U1RQW1 187 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 METTL15A6NJ78 407 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 MEN1O00255 615 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 TLX2O43763 284 aaPredicted RBP13.41□□□□□ -0.26
COL5A1-205ENST00000464187 PFDN1O60925 122 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 SULT1C4O75897 302 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 CBX7O95931 251 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 THY1P04216 161 aa13.41□□□□□ -0.26
COL5A1-205ENST00000464187 ZNF28P17035 718 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms