RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 TNFRSF21O75509 655 aa11.68□□□□□ -0.54
XRN1-203ENST00000463916 SLC22A3O75751 556 aa11.68□□□□□ -0.54
XRN1-203ENST00000463916 LINGO3P0C6S8 592 aa11.68□□□□□ -0.54
XRN1-203ENST00000463916 TMIGD3P0DMS9 266 aaPredicted RBP11.68□□□□□ -0.54
XRN1-203ENST00000463916 GPR68Q15743 365 aa11.68□□□□□ -0.54
XRN1-203ENST00000463916 TOMM34Q15785 309 aaPredicted RBP11.68□□□□□ -0.54
XRN1-203ENST00000463916 MAPK14Q16539 360 aa11.68□□□□□ -0.54
XRN1-203ENST00000463916 PDCD4Q53EL6 469 aaKnown RBP11.68□□□□□ -0.54
XRN1-203ENST00000463916 PDZK1Q5T2W1 519 aa11.68□□□□□ -0.54
XRN1-203ENST00000463916 GRAMD2AQ8IUY3 354 aa11.68□□□□□ -0.54
XRN1-203ENST00000463916 MISPQ8IVT2 679 aa11.68□□□□□ -0.54
XRN1-203ENST00000463916 GTPBP8Q8N3Z3 284 aaPredicted RBP11.68□□□□□ -0.54
XRN1-203ENST00000463916 FIG4Q92562 907 aa11.68□□□□□ -0.54
XRN1-203ENST00000463916 RNF145Q96MT1 663 aa11.68□□□□□ -0.54
XRN1-203ENST00000463916 TM9SF2Q99805 663 aa11.68□□□□□ -0.54
XRN1-203ENST00000463916 EBF4Q9BQW3 602 aa11.68□□□□□ -0.54
XRN1-203ENST00000463916 ARGLU1Q9NWB6 273 aaPredicted RBP11.68□□□□□ -0.54
XRN1-203ENST00000463916 L3MBTL1Q9Y468 752 aa11.68□□□□□ -0.54
XRN1-203ENST00000463916 DTNAQ9Y4J8 743 aa11.68□□□□□ -0.54
XRN1-203ENST00000463916 HMGB1P1B2RPK0 211 aaPredicted RBP11.67□□□□□ -0.54
XRN1-203ENST00000463916 LINC01387J3KSC0 135 aa11.67□□□□□ -0.54
XRN1-203ENST00000463916 UBDO15205 165 aa11.67□□□□□ -0.54
XRN1-203ENST00000463916 EFNA2O43921 213 aa11.67□□□□□ -0.54
XRN1-203ENST00000463916 STX11O75558 287 aa11.67□□□□□ -0.54
XRN1-203ENST00000463916 UGT2B17O75795 530 aa11.67□□□□□ -0.54
XRN1-203ENST00000463916 UQCRC1P31930 480 aa11.67□□□□□ -0.54
XRN1-203ENST00000463916 IDH3AP50213 366 aa11.67□□□□□ -0.54
XRN1-203ENST00000463916 ZNF621Q6ZSS3 439 aa11.67□□□□□ -0.54
XRN1-203ENST00000463916 RNF130Q86XS8 419 aa11.67□□□□□ -0.54
XRN1-203ENST00000463916 MEIOBQ8N635 442 aa11.67□□□□□ -0.54
XRN1-203ENST00000463916 ZNF614Q8N883 585 aa11.67□□□□□ -0.54
XRN1-203ENST00000463916 ZNF527Q8NB42 609 aa11.67□□□□□ -0.54
XRN1-203ENST00000463916 C14orf79Q96F83 325 aa11.67□□□□□ -0.54
XRN1-203ENST00000463916 PINK1Q9BXM7 581 aa11.67□□□□□ -0.54
XRN1-203ENST00000463916 ZNF350Q9GZX5 532 aa11.67□□□□□ -0.54
XRN1-203ENST00000463916 JKAMPQ9P055 326 aa11.67□□□□□ -0.54
XRN1-203ENST00000463916 AP4B1Q9Y6B7 739 aa11.67□□□□□ -0.54
XRN1-203ENST00000463916 CELSR1Q9NYQ6 3014 aa11.67□□□□□ -0.54
XRN1-203ENST00000463916 A0A087WZY1 265 aa11.67□□□□□ -0.54
XRN1-203ENST00000463916 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.67□□□□□ -0.54
XRN1-203ENST00000463916 HMGN4O00479 90 aa11.67□□□□□ -0.54
XRN1-203ENST00000463916 BCAS1O75363 584 aaPredicted RBP11.67□□□□□ -0.54
XRN1-203ENST00000463916 TNFSF13O75888 250 aa11.67□□□□□ -0.54
XRN1-203ENST00000463916 ZNF17P17021 662 aa11.67□□□□□ -0.54
XRN1-203ENST00000463916 OPRM1P35372 400 aa11.67□□□□□ -0.54
XRN1-203ENST00000463916 CHI3L1P36222 383 aaPredicted RBP11.67□□□□□ -0.54
XRN1-203ENST00000463916 ASCL1P50553 236 aa11.67□□□□□ -0.54
XRN1-203ENST00000463916 PPP2R2AP63151 447 aa11.67□□□□□ -0.54
XRN1-203ENST00000463916 TLE4Q04727 773 aa11.67□□□□□ -0.54
XRN1-203ENST00000463916 GSTA3Q16772 222 aa11.67□□□□□ -0.54
XRN1-203ENST00000463916 FBXL19-AS1Q494R0 122 aa11.67□□□□□ -0.54
XRN1-203ENST00000463916 COX20Q5RI15 118 aa11.67□□□□□ -0.54
XRN1-203ENST00000463916 TYW3Q6IPR3 259 aaKnown RBP11.67□□□□□ -0.54
XRN1-203ENST00000463916 C16orf62Q7Z3J2 963 aa11.67□□□□□ -0.54
XRN1-203ENST00000463916 MTERF4Q7Z6M4 381 aaKnown RBP11.67□□□□□ -0.54
XRN1-203ENST00000463916 HMGN2P46Q86SG4 172 aa11.67□□□□□ -0.54
XRN1-203ENST00000463916 GLB1L3Q8NCI6 653 aaPredicted RBP11.67□□□□□ -0.54
XRN1-203ENST00000463916 FNDC9Q8TBE3 224 aa11.67□□□□□ -0.54
XRN1-203ENST00000463916 PNPT1Q8TCS8 783 aaKnown RBP11.67□□□□□ -0.54
XRN1-203ENST00000463916 VPS33AQ96AX1 596 aa11.67□□□□□ -0.54
XRN1-203ENST00000463916 ZBTB8AQ96BR9 441 aa11.67□□□□□ -0.54
XRN1-203ENST00000463916 ZBTB18Q99592 522 aa11.67□□□□□ -0.54
XRN1-203ENST00000463916 NMUR2Q9GZQ4 415 aa11.67□□□□□ -0.54
XRN1-203ENST00000463916 TMEM185BQ9H7F4 350 aa11.67□□□□□ -0.54
XRN1-203ENST00000463916 C7orf72A4D263 438 aa11.66□□□□□ -0.54
XRN1-203ENST00000463916 SERINC4A6NH21 518 aa11.66□□□□□ -0.54
XRN1-203ENST00000463916 SLC22A20A6NK97 555 aa11.66□□□□□ -0.54
XRN1-203ENST00000463916 EEF1E1-BLOC1S5C9J1V9 151 aa11.66□□□□□ -0.54
XRN1-203ENST00000463916 EEF1E1O43324 174 aaKnown RBP11.66□□□□□ -0.54
XRN1-203ENST00000463916 IL18BPO95998 194 aa11.66□□□□□ -0.54
XRN1-203ENST00000463916 CD1EP15812 388 aa11.66□□□□□ -0.54
XRN1-203ENST00000463916 SSTR2P30874 369 aa11.66□□□□□ -0.54
XRN1-203ENST00000463916 ZNF41P51814 821 aaPredicted RBP11.66□□□□□ -0.54
XRN1-203ENST00000463916 PON3Q15166 354 aa11.66□□□□□ -0.54
XRN1-203ENST00000463916 ZNF141Q15928 474 aa11.66□□□□□ -0.54
XRN1-203ENST00000463916 CTU2Q2VPK5 515 aaKnown RBP11.66□□□□□ -0.54
XRN1-203ENST00000463916 AP1ARQ63HQ0 302 aa11.66□□□□□ -0.54
XRN1-203ENST00000463916 DNAJC14Q6Y2X3 702 aaPredicted RBP11.66□□□□□ -0.54
XRN1-203ENST00000463916 GOLGA6L1Q8N7Z2 621 aa11.66□□□□□ -0.54
XRN1-203ENST00000463916 GPR119Q8TDV5 335 aa11.66□□□□□ -0.54
XRN1-203ENST00000463916 DYDC1Q8WWB3 177 aa11.66□□□□□ -0.54
XRN1-203ENST00000463916 ROPN1LQ96C74 230 aa11.66□□□□□ -0.54
XRN1-203ENST00000463916 ADGRG7Q96K78 797 aa11.66□□□□□ -0.54
XRN1-203ENST00000463916 LURAP1Q96LR2 239 aa11.66□□□□□ -0.54
XRN1-203ENST00000463916 INTS9Q9NV88 658 aaKnown RBP11.66□□□□□ -0.54
XRN1-203ENST00000463916 EXD2Q9NVH0 621 aa11.66□□□□□ -0.54
XRN1-203ENST00000463916 ZIM2Q9NZV7 527 aa11.66□□□□□ -0.54
XRN1-203ENST00000463916 HEATR5AQ86XA9 2040 aa11.66□□□□□ -0.54
XRN1-203ENST00000463916 ANKHD1Q8IWZ3 2542 aaKnown RBP11.66□□□□□ -0.54
XRN1-203ENST00000463916 GTPBP1O00178 669 aaKnown RBP11.66□□□□□ -0.54
XRN1-203ENST00000463916 EIF1AYO14602 144 aaKnown RBP11.66□□□□□ -0.54
XRN1-203ENST00000463916 AQP8O94778 261 aa11.66□□□□□ -0.54
XRN1-203ENST00000463916 NUDT14O95848 222 aa11.66□□□□□ -0.54
XRN1-203ENST00000463916 AK1P00568 194 aa11.66□□□□□ -0.54
XRN1-203ENST00000463916 IL6P05231 212 aa11.66□□□□□ -0.54
XRN1-203ENST00000463916 SHC1P29353 583 aa11.66□□□□□ -0.54
XRN1-203ENST00000463916 SLC6A8P48029 635 aa11.66□□□□□ -0.54
XRN1-203ENST00000463916 P2RX1P51575 399 aa11.66□□□□□ -0.54
XRN1-203ENST00000463916 FOXF1Q12946 379 aa11.66□□□□□ -0.54
XRN1-203ENST00000463916 SYPL1Q16563 259 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms