RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 DHRS4L1P0CG22 281 aa6.54□□□□□ -1.36
PTPRF-210ENST00000463041 MATN1P21941 496 aa6.54□□□□□ -1.36
PTPRF-210ENST00000463041 ME2P23368 584 aa6.54□□□□□ -1.36
PTPRF-210ENST00000463041 PSMA4P25789 261 aaKnown RBP6.54□□□□□ -1.36
PTPRF-210ENST00000463041 EIF1AXP47813 144 aaKnown RBP6.54□□□□□ -1.36
PTPRF-210ENST00000463041 P2RX1P51575 399 aa6.54□□□□□ -1.36
PTPRF-210ENST00000463041 SUMO3P55854 103 aaPredicted RBP6.54□□□□□ -1.36
PTPRF-210ENST00000463041 RIPPLY3P57055 190 aa6.54□□□□□ -1.36
PTPRF-210ENST00000463041 CARD18P57730 90 aa6.54□□□□□ -1.36
PTPRF-210ENST00000463041 HBA1P69905 142 aa6.54□□□□□ -1.36
PTPRF-210ENST00000463041 STX3Q13277 289 aa6.54□□□□□ -1.36
PTPRF-210ENST00000463041 GUSBP1Q15486 140 aa6.54□□□□□ -1.36
PTPRF-210ENST00000463041 PGS1Q32NB8 556 aa6.54□□□□□ -1.36
PTPRF-210ENST00000463041 PLPPR5Q32ZL2 321 aa6.54□□□□□ -1.36
PTPRF-210ENST00000463041 CCNJQ5T5M9 372 aa6.54□□□□□ -1.36
PTPRF-210ENST00000463041 ANXA8L1Q5VT79 327 aa6.54□□□□□ -1.36
PTPRF-210ENST00000463041 AP1ARQ63HQ0 302 aa6.54□□□□□ -1.36
PTPRF-210ENST00000463041 VWA1Q6PCB0 445 aa6.54□□□□□ -1.36
PTPRF-210ENST00000463041 ZNF474Q6S9Z5 364 aaPredicted RBP6.54□□□□□ -1.36
PTPRF-210ENST00000463041 C6orf120Q7Z4R8 191 aa6.54□□□□□ -1.36
PTPRF-210ENST00000463041 GALNT10Q86SR1 603 aa6.54□□□□□ -1.36
PTPRF-210ENST00000463041 GGNQ86UU5 652 aa6.54□□□□□ -1.36
PTPRF-210ENST00000463041 LILRA2Q8N149 483 aa6.54□□□□□ -1.36
PTPRF-210ENST00000463041 ZNF781Q8N8C0 355 aa6.54□□□□□ -1.36
PTPRF-210ENST00000463041 ZNF610Q8N9Z0 462 aa6.54□□□□□ -1.36
PTPRF-210ENST00000463041 GATSQ8NAP1 163 aa6.54□□□□□ -1.36
PTPRF-210ENST00000463041 OR8J2Q8NGG1 315 aa6.54□□□□□ -1.36
PTPRF-210ENST00000463041 FBXO30Q8TB52 745 aa6.54□□□□□ -1.36
PTPRF-210ENST00000463041 PHOSPHO1Q8TCT1 267 aa6.54□□□□□ -1.36
PTPRF-210ENST00000463041 NUDT8Q8WV74 236 aa6.54□□□□□ -1.36
PTPRF-210ENST00000463041 OSTF1Q92882 214 aa6.54□□□□□ -1.36
PTPRF-210ENST00000463041 CDS1Q92903 461 aa6.54□□□□□ -1.36
PTPRF-210ENST00000463041 ARL8AQ96BM9 186 aa6.54□□□□□ -1.36
PTPRF-210ENST00000463041 GMPPAQ96IJ6 420 aaPredicted RBP6.54□□□□□ -1.36
PTPRF-210ENST00000463041 WFIKKN1Q96NZ8 548 aa6.54□□□□□ -1.36
PTPRF-210ENST00000463041 SDF2Q99470 211 aa6.54□□□□□ -1.36
PTPRF-210ENST00000463041 DPY30Q9C005 99 aa6.54□□□□□ -1.36
PTPRF-210ENST00000463041 ZNF395Q9H8N7 513 aaPredicted RBP6.54□□□□□ -1.36
PTPRF-210ENST00000463041 KCNK9Q9NPC2 374 aa6.54□□□□□ -1.36
PTPRF-210ENST00000463041 FANCFQ9NPI8 374 aa6.54□□□□□ -1.36
PTPRF-210ENST00000463041 TIGARQ9NQ88 270 aa6.54□□□□□ -1.36
PTPRF-210ENST00000463041 ZNF226Q9NYT6 803 aa6.54□□□□□ -1.36
PTPRF-210ENST00000463041 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.54□□□□□ -1.36
PTPRF-210ENST00000463041 HAO1Q9UJM8 370 aa6.54□□□□□ -1.36
PTPRF-210ENST00000463041 MCTS1Q9ULC4 181 aaKnown RBP6.54□□□□□ -1.36
PTPRF-210ENST00000463041 PROCRQ9UNN8 238 aa6.54□□□□□ -1.36
PTPRF-210ENST00000463041 EMC9Q9Y3B6 208 aa6.54□□□□□ -1.36
PTPRF-210ENST00000463041 DTNAQ9Y4J8 743 aa6.54□□□□□ -1.36
PTPRF-210ENST00000463041 KCNE3Q9Y6H6 103 aa6.54□□□□□ -1.36
PTPRF-210ENST00000463041 V9GYY5 206 aaPredicted RBP6.54□□□□□ -1.36
PTPRF-210ENST00000463041 CADP27708 2225 aa6.53□□□□□ -1.36
PTPRF-210ENST00000463041 A0A0J9YW62 118 aa6.53□□□□□ -1.36
PTPRF-210ENST00000463041 GJE1A6NN92 205 aa6.53□□□□□ -1.36
PTPRF-210ENST00000463041 SHISA8B8ZZ34 492 aa6.53□□□□□ -1.36
PTPRF-210ENST00000463041 NPIPB9F8W1W9 429 aa6.53□□□□□ -1.36
PTPRF-210ENST00000463041 ZNF195O14628 629 aa6.53□□□□□ -1.36
PTPRF-210ENST00000463041 CXCL13O43927 109 aa6.53□□□□□ -1.36
PTPRF-210ENST00000463041 STX11O75558 287 aa6.53□□□□□ -1.36
PTPRF-210ENST00000463041 AQP8O94778 261 aa6.53□□□□□ -1.36
PTPRF-210ENST00000463041 PLGP00747 810 aaPredicted RBP6.53□□□□□ -1.36
PTPRF-210ENST00000463041 RAF1P04049 648 aa6.53□□□□□ -1.36
PTPRF-210ENST00000463041 GUSBP08236 651 aa6.53□□□□□ -1.36
PTPRF-210ENST00000463041 CD99P14209 185 aa6.53□□□□□ -1.36
PTPRF-210ENST00000463041 POU2F1P14859 743 aa6.53□□□□□ -1.36
PTPRF-210ENST00000463041 LBPP18428 481 aa6.53□□□□□ -1.36
PTPRF-210ENST00000463041 UQCRC2P22695 453 aa6.53□□□□□ -1.36
PTPRF-210ENST00000463041 UGT2B10P36537 528 aa6.53□□□□□ -1.36
PTPRF-210ENST00000463041 KCNJ5P48544 419 aa6.53□□□□□ -1.36
PTPRF-210ENST00000463041 CTBP2P56545 445 aa6.53□□□□□ -1.36
PTPRF-210ENST00000463041 SIRPAP78324 504 aa6.53□□□□□ -1.36
PTPRF-210ENST00000463041 KEAP1Q14145 624 aa6.53□□□□□ -1.36
PTPRF-210ENST00000463041 MPP2Q14168 576 aa6.53□□□□□ -1.36
PTPRF-210ENST00000463041 CD226Q15762 336 aa6.53□□□□□ -1.36
PTPRF-210ENST00000463041 DPY19L1Q2PZI1 675 aa6.53□□□□□ -1.36
PTPRF-210ENST00000463041 ARHGAP11BQ3KRB8 267 aa6.53□□□□□ -1.36
PTPRF-210ENST00000463041 CEP85LQ5SZL2 805 aa6.53□□□□□ -1.36
PTPRF-210ENST00000463041 DCST2Q5T1A1 773 aa6.53□□□□□ -1.36
PTPRF-210ENST00000463041 HBMQ6B0K9 141 aa6.53□□□□□ -1.36
PTPRF-210ENST00000463041 OR4F3Q6IEY1 312 aa6.53□□□□□ -1.36
PTPRF-210ENST00000463041 PAMR1Q6UXH9 720 aa6.53□□□□□ -1.36
PTPRF-210ENST00000463041 TGIF2LYQ8IUE0 185 aa6.53□□□□□ -1.36
PTPRF-210ENST00000463041 OR6K3Q8NGY3 331 aa6.53□□□□□ -1.36
PTPRF-210ENST00000463041 OR5W2Q8NH69 310 aa6.53□□□□□ -1.36
PTPRF-210ENST00000463041 OR10D3Q8NH80 312 aa6.53□□□□□ -1.36
PTPRF-210ENST00000463041 OR2V1Q8NHB1 315 aa6.53□□□□□ -1.36
PTPRF-210ENST00000463041 POC1BQ8TC44 478 aa6.53□□□□□ -1.36
PTPRF-210ENST00000463041 MIPOL1Q8TD10 442 aa6.53□□□□□ -1.36
PTPRF-210ENST00000463041 GPR119Q8TDV5 335 aa6.53□□□□□ -1.36
PTPRF-210ENST00000463041 OIT3Q8WWZ8 545 aa6.53□□□□□ -1.36
PTPRF-210ENST00000463041 TESCQ96BS2 214 aa6.53□□□□□ -1.36
PTPRF-210ENST00000463041 ARSGQ96EG1 525 aa6.53□□□□□ -1.36
PTPRF-210ENST00000463041 OTUB1Q96FW1 271 aaPredicted RBP6.53□□□□□ -1.36
PTPRF-210ENST00000463041 SH3YL1Q96HL8 342 aaPredicted RBP6.53□□□□□ -1.36
PTPRF-210ENST00000463041 REXO5Q96IC2 774 aaKnown RBP6.53□□□□□ -1.36
PTPRF-210ENST00000463041 ADGRG7Q96K78 797 aa6.53□□□□□ -1.36
PTPRF-210ENST00000463041 PKNOX2Q96KN3 472 aa6.53□□□□□ -1.36
PTPRF-210ENST00000463041 RNF145Q96MT1 663 aa6.53□□□□□ -1.36
PTPRF-210ENST00000463041 ALPK1Q96QP1 1244 aa6.53□□□□□ -1.36
PTPRF-210ENST00000463041 OR7D2Q96RA2 312 aa6.53□□□□□ -1.36
PTPRF-210ENST00000463041 SORT1Q99523 831 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 232 ms