RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 GIMAP1Q8WWP7 306 aa11.58□□□□□ -0.56
HDAC4-208ENST00000463007 SMARCD2Q92925 531 aa11.58□□□□□ -0.56
HDAC4-208ENST00000463007 SIPA1Q96FS4 1042 aa11.58□□□□□ -0.56
HDAC4-208ENST00000463007 AMDHD1Q96NU7 426 aa11.58□□□□□ -0.56
HDAC4-208ENST00000463007 AUNIPQ9H7T9 357 aa11.58□□□□□ -0.56
HDAC4-208ENST00000463007 LHX9Q9NQ69 397 aa11.58□□□□□ -0.56
HDAC4-208ENST00000463007 WASH6PQ9NQA3 447 aa11.58□□□□□ -0.56
HDAC4-208ENST00000463007 PRSS16Q9NQE7 514 aa11.58□□□□□ -0.56
HDAC4-208ENST00000463007 OBP2AQ9NY56 170 aa11.58□□□□□ -0.56
HDAC4-208ENST00000463007 SLC7A7Q9UM01 511 aa11.58□□□□□ -0.56
HDAC4-208ENST00000463007 SCML1Q9UN30 329 aa11.58□□□□□ -0.56
HDAC4-208ENST00000463007 AK6Q9Y3D8 172 aaKnown RBP11.58□□□□□ -0.56
HDAC4-208ENST00000463007 ATG4BQ9Y4P1 393 aa11.58□□□□□ -0.56
HDAC4-208ENST00000463007 CHURC1-FNTBB4DL54 471 aa11.58□□□□□ -0.56
HDAC4-208ENST00000463007 STK25O00506 426 aa11.58□□□□□ -0.56
HDAC4-208ENST00000463007 SIGLEC5O15389 551 aa11.58□□□□□ -0.56
HDAC4-208ENST00000463007 TBX19O60806 448 aa11.58□□□□□ -0.56
HDAC4-208ENST00000463007 TCRBP04435 133 aa11.58□□□□□ -0.56
HDAC4-208ENST00000463007 SAGP10523 405 aaPredicted RBP11.58□□□□□ -0.56
HDAC4-208ENST00000463007 ANXA3P12429 323 aa11.58□□□□□ -0.56
HDAC4-208ENST00000463007 PKLRP30613 574 aa11.58□□□□□ -0.56
HDAC4-208ENST00000463007 ACSL1P33121 698 aa11.58□□□□□ -0.56
HDAC4-208ENST00000463007 WASP42768 502 aa11.58□□□□□ -0.56
HDAC4-208ENST00000463007 OR12D2P58182 307 aa11.58□□□□□ -0.56
HDAC4-208ENST00000463007 SIGLEC14Q08ET2 396 aa11.58□□□□□ -0.56
HDAC4-208ENST00000463007 FAAH2Q6GMR7 532 aa11.58□□□□□ -0.56
HDAC4-208ENST00000463007 FTMTQ8N4E7 242 aa11.58□□□□□ -0.56
HDAC4-208ENST00000463007 PRRC1Q96M27 445 aa11.58□□□□□ -0.56
HDAC4-208ENST00000463007 OR10A4Q9H209 315 aa11.58□□□□□ -0.56
HDAC4-208ENST00000463007 SLC35C2Q9NQQ7 365 aa11.58□□□□□ -0.56
HDAC4-208ENST00000463007 DEC1Q9P2X7 70 aa11.58□□□□□ -0.56
HDAC4-208ENST00000463007 THAP10Q9P2Z0 257 aaPredicted RBP11.58□□□□□ -0.56
HDAC4-208ENST00000463007 FBXO9Q9UK97 447 aaPredicted RBP11.58□□□□□ -0.56
HDAC4-208ENST00000463007 LAMA1P25391 3075 aa11.58□□□□□ -0.56
HDAC4-208ENST00000463007 RNF13O43567 381 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 FZD7O75084 574 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 TSPAN9O75954 239 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 OR5F1O95221 314 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 FAM157BP0CG42 384 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 SLC6A1P30531 599 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 NTSP30990 170 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 FRKP42685 505 aaPredicted RBP11.57□□□□□ -0.56
HDAC4-208ENST00000463007 C19orf57Q0VDD7 668 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 FAM46CQ5VWP2 391 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 ZNF322Q6U7Q0 402 aaPredicted RBP11.57□□□□□ -0.56
HDAC4-208ENST00000463007 ZNF793Q6ZN11 406 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 SHISA5Q8N114 240 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 DNAJA4Q8WW22 397 aaPredicted RBP11.57□□□□□ -0.56
HDAC4-208ENST00000463007 RFKQ969G6 155 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 LGR4Q9BXB1 951 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 MS4A7Q9GZW8 240 aaPredicted RBP11.57□□□□□ -0.56
HDAC4-208ENST00000463007 ZFP64Q9NPA5 681 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 USP36Q9P275 1121 aaKnown RBP11.57□□□□□ -0.56
HDAC4-208ENST00000463007 SPTBN5Q9NRC6 3674 aaKnown RBP11.57□□□□□ -0.56
HDAC4-208ENST00000463007 ARRDC5A6NEK1 342 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 CDK2AP1O14519 115 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 NARSO43776 548 aaKnown RBP11.57□□□□□ -0.56
HDAC4-208ENST00000463007 HPXP02790 462 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 PRG2P13727 222 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 GRPRP30550 384 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 RAB14P61106 215 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 FUT5Q11128 374 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 CDONQ4KMG0 1287 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 VASNQ6EMK4 673 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 FGF13Q92913 245 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 UBE2E3Q969T4 207 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 RAB7BQ96AH8 199 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 WDR89Q96FK6 387 aaPredicted RBP11.57□□□□□ -0.56
HDAC4-208ENST00000463007 PPP1R16AQ96I34 528 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 FERD3LQ96RJ6 166 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 MS4A8Q9BY19 250 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 DPAGT1Q9H3H5 408 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 ZC4H2Q9NQZ6 224 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 CENPVL1A0A0U1RR11 272 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 OR52A4PA6NMU1 304 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 CHST10O43529 356 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 ANKRD34CP0C6C1 535 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 CERS1P27544 350 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 NAA10P41227 235 aaPredicted RBP11.57□□□□□ -0.56
HDAC4-208ENST00000463007 ARHGAP19Q14CB8 494 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 LGALSLQ3ZCW2 172 aaPredicted RBP11.57□□□□□ -0.56
HDAC4-208ENST00000463007 EOGTQ5NDL2 527 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 AGBL4Q5VU57 503 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 METRNLQ641Q3 311 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 SFXN4Q6P4A7 337 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 BPHLQ86WA6 291 aaPredicted RBP11.57□□□□□ -0.56
HDAC4-208ENST00000463007 TMEFF1Q8IYR6 380 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 FBXL6Q8N531 539 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 ACBD7Q8N6N7 88 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 ARIH2OSQ8N7S6 290 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 SLC16A11Q8NCK7 471 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 OR5W2Q8NH69 310 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 OR5K2Q8NHB8 316 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 GRHL3Q8TE85 626 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 RGMAQ96B86 450 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 CREB3L1Q96BA8 519 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 DNAJA3Q96EY1 480 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 ZNF764Q96H86 408 aaPredicted RBP11.57□□□□□ -0.56
HDAC4-208ENST00000463007 C4orf36Q96KX1 117 aa11.57□□□□□ -0.56
HDAC4-208ENST00000463007 ZNF559Q9BR84 538 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms