RNA–Protein interactions for RNA: ENST00000462733.5

ATPAF2-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 1 (best)

Gene ATPAF2, Length 1,737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-202ENST00000462733 FAM111BQ6SJ93 734 aa16.7■□□□□ 0.26
ATPAF2-202ENST00000462733 TMEM107Q6UX40 140 aa16.7■□□□□ 0.26
ATPAF2-202ENST00000462733 Q6ZPB1 254 aaPredicted RBP16.7■□□□□ 0.26
ATPAF2-202ENST00000462733 TAGAPQ8N103 731 aa16.7■□□□□ 0.26
ATPAF2-202ENST00000462733 STX19Q8N4C7 294 aa16.7■□□□□ 0.26
ATPAF2-202ENST00000462733 OR52J3Q8NH60 311 aa16.7■□□□□ 0.26
ATPAF2-202ENST00000462733 RIT1Q92963 219 aa16.7■□□□□ 0.26
ATPAF2-202ENST00000462733 SNX8Q9Y5X2 465 aa16.7■□□□□ 0.26
ATPAF2-202ENST00000462733 DSPPQ9NZW4 1301 aa16.69■□□□□ 0.26
ATPAF2-202ENST00000462733 SAGE2PA6NJ88 616 aa16.69■□□□□ 0.26
ATPAF2-202ENST00000462733 C17orf105B2RV13 164 aa16.69■□□□□ 0.26
ATPAF2-202ENST00000462733 TAF4O00268 1085 aa16.69■□□□□ 0.26
ATPAF2-202ENST00000462733 TLX3O43711 291 aaPredicted RBP16.69■□□□□ 0.26
ATPAF2-202ENST00000462733 PGDP52209 483 aa16.69■□□□□ 0.26
ATPAF2-202ENST00000462733 LSM3P62310 102 aaKnown RBP16.69■□□□□ 0.26
ATPAF2-202ENST00000462733 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.69■□□□□ 0.26
ATPAF2-202ENST00000462733 TMEM205Q6UW68 189 aa16.69■□□□□ 0.26
ATPAF2-202ENST00000462733 AMER2Q8N7J2 671 aa16.69■□□□□ 0.26
ATPAF2-202ENST00000462733 AQP11Q8NBQ7 271 aa16.69■□□□□ 0.26
ATPAF2-202ENST00000462733 MCFD2Q8NI22 146 aa16.69■□□□□ 0.26
ATPAF2-202ENST00000462733 ZNF675Q8TD23 568 aa16.69■□□□□ 0.26
ATPAF2-202ENST00000462733 PROX1Q92786 737 aa16.69■□□□□ 0.26
ATPAF2-202ENST00000462733 PELOQ9BRX2 385 aaKnown RBP16.69■□□□□ 0.26
ATPAF2-202ENST00000462733 RACGAP1Q9H0H5 632 aa16.69■□□□□ 0.26
ATPAF2-202ENST00000462733 DSN1Q9H410 356 aa16.69■□□□□ 0.26
ATPAF2-202ENST00000462733 ADAP2Q9NPF8 381 aa16.69■□□□□ 0.26
ATPAF2-202ENST00000462733 CLN6Q9NWW5 311 aa16.69■□□□□ 0.26
ATPAF2-202ENST00000462733 C19orf25Q9UFG5 118 aaPredicted RBP16.69■□□□□ 0.26
ATPAF2-202ENST00000462733 TMCC3Q9ULS5 477 aa16.69■□□□□ 0.26
ATPAF2-202ENST00000462733 MGAT4BQ9UQ53 548 aa16.69■□□□□ 0.26
ATPAF2-202ENST00000462733 APC2O95996 2303 aa16.69■□□□□ 0.26
ATPAF2-202ENST00000462733 ACACAQ13085 2346 aa16.69■□□□□ 0.26
ATPAF2-202ENST00000462733 FRYQ5TBA9 3013 aa16.69■□□□□ 0.26
ATPAF2-202ENST00000462733 FAAHO00519 579 aa16.68■□□□□ 0.26
ATPAF2-202ENST00000462733 PCDH17O14917 1159 aa16.68■□□□□ 0.26
ATPAF2-202ENST00000462733 CYC1P08574 325 aa16.68■□□□□ 0.26
ATPAF2-202ENST00000462733 CT62P0C5K7 136 aa16.68■□□□□ 0.26
ATPAF2-202ENST00000462733 ADORA3P0DMS8 318 aa16.68■□□□□ 0.26
ATPAF2-202ENST00000462733 MMP11P24347 488 aa16.68■□□□□ 0.26
ATPAF2-202ENST00000462733 CRISP1P54107 249 aa16.68■□□□□ 0.26
ATPAF2-202ENST00000462733 CASP9P55211 416 aa16.68■□□□□ 0.26
ATPAF2-202ENST00000462733 IL10RAQ13651 578 aa16.68■□□□□ 0.26
ATPAF2-202ENST00000462733 SSPNQ14714 243 aa16.68■□□□□ 0.26
ATPAF2-202ENST00000462733 PRICKLE4Q2TBC4 344 aa16.68■□□□□ 0.26
ATPAF2-202ENST00000462733 TIMM50Q3ZCQ8 353 aa16.68■□□□□ 0.26
ATPAF2-202ENST00000462733 ZNF404Q494X3 552 aa16.68■□□□□ 0.26
ATPAF2-202ENST00000462733 TMEM236Q5W0B7 351 aa16.68■□□□□ 0.26
ATPAF2-202ENST00000462733 CPEB2Q7Z5Q1 589 aaKnown RBP16.68■□□□□ 0.26
ATPAF2-202ENST00000462733 LACC1Q8IV20 430 aa16.68■□□□□ 0.26
ATPAF2-202ENST00000462733 GALNT12Q8IXK2 581 aa16.68■□□□□ 0.26
ATPAF2-202ENST00000462733 C7orf57Q8NEG2 295 aa16.68■□□□□ 0.26
ATPAF2-202ENST00000462733 OR9Q2Q8NGE9 314 aa16.68■□□□□ 0.26
ATPAF2-202ENST00000462733 SLC38A5Q8WUX1 472 aa16.68■□□□□ 0.26
ATPAF2-202ENST00000462733 RPL3LQ92901 407 aaKnown RBP16.68■□□□□ 0.26
ATPAF2-202ENST00000462733 ZNF607Q96SK3 696 aa16.68■□□□□ 0.26
ATPAF2-202ENST00000462733 CNPPD1Q9BV87 410 aa16.68■□□□□ 0.26
ATPAF2-202ENST00000462733 NXF2Q9GZY0 626 aaKnown RBP16.68■□□□□ 0.26
ATPAF2-202ENST00000462733 ANKRA2Q9H9E1 313 aa16.68■□□□□ 0.26
ATPAF2-202ENST00000462733 CHCHD3Q9NX63 227 aaKnown RBP16.68■□□□□ 0.26
ATPAF2-202ENST00000462733 MAT2BQ9NZL9 334 aa16.68■□□□□ 0.26
ATPAF2-202ENST00000462733 HS3ST3B1Q9Y662 390 aa16.68■□□□□ 0.26
ATPAF2-202ENST00000462733 CLCA3PQ9Y6N3 262 aa16.68■□□□□ 0.26
ATPAF2-202ENST00000462733 ISPDA4D126 451 aa16.67■□□□□ 0.26
ATPAF2-202ENST00000462733 TMEM247A6NEH6 219 aa16.67■□□□□ 0.26
ATPAF2-202ENST00000462733 METTL15A6NJ78 407 aa16.67■□□□□ 0.26
ATPAF2-202ENST00000462733 MFN2O95140 757 aa16.67■□□□□ 0.26
ATPAF2-202ENST00000462733 IGHEP01854 428 aa16.67■□□□□ 0.26
ATPAF2-202ENST00000462733 C21orf33P30042 268 aaPredicted RBP16.67■□□□□ 0.26
ATPAF2-202ENST00000462733 MC3RP41968 323 aa16.67■□□□□ 0.26
ATPAF2-202ENST00000462733 PSMD7P51665 324 aa16.67■□□□□ 0.26
ATPAF2-202ENST00000462733 PPP5CP53041 499 aa16.67■□□□□ 0.26
ATPAF2-202ENST00000462733 SNRPGP62308 76 aaKnown RBP16.67■□□□□ 0.26
ATPAF2-202ENST00000462733 ZNF267Q14586 743 aaPredicted RBP16.67■□□□□ 0.26
ATPAF2-202ENST00000462733 PTGES3Q15185 160 aaKnown RBP16.67■□□□□ 0.26
ATPAF2-202ENST00000462733 ELAVL1Q15717 326 aaKnown RBP16.67■□□□□ 0.26
ATPAF2-202ENST00000462733 TRMT12Q53H54 448 aaKnown RBP16.67■□□□□ 0.26
ATPAF2-202ENST00000462733 ZNF628Q5EBL2 1059 aa16.67■□□□□ 0.26
ATPAF2-202ENST00000462733 KLHL17Q6TDP4 642 aa16.67■□□□□ 0.26
ATPAF2-202ENST00000462733 SZRD1Q7Z422 152 aa16.67■□□□□ 0.26
ATPAF2-202ENST00000462733 HORMAD2Q8N7B1 307 aa16.67■□□□□ 0.26
ATPAF2-202ENST00000462733 PTPMT1Q8WUK0 201 aaPredicted RBP16.67■□□□□ 0.26
ATPAF2-202ENST00000462733 KCNE4Q8WWG9 221 aa16.67■□□□□ 0.26
ATPAF2-202ENST00000462733 CCDC86Q9H6F5 360 aaKnown RBP16.67■□□□□ 0.26
ATPAF2-202ENST00000462733 NMNAT1Q9HAN9 279 aaPredicted RBP16.67■□□□□ 0.26
ATPAF2-202ENST00000462733 SIRT3Q9NTG7 399 aaPredicted RBP16.67■□□□□ 0.26
ATPAF2-202ENST00000462733 GPR83Q9NYM4 423 aa16.67■□□□□ 0.26
ATPAF2-202ENST00000462733 J3KTA2 159 aa16.67■□□□□ 0.26
ATPAF2-202ENST00000462733 HRKO00198 91 aa16.67■□□□□ 0.26
ATPAF2-202ENST00000462733 GADD45AP24522 165 aa16.67■□□□□ 0.26
ATPAF2-202ENST00000462733 GSSP48637 474 aa16.67■□□□□ 0.26
ATPAF2-202ENST00000462733 ANXA11P50995 505 aaKnown RBP16.67■□□□□ 0.26
ATPAF2-202ENST00000462733 MGAT2Q10469 447 aa16.67■□□□□ 0.26
ATPAF2-202ENST00000462733 ST3GAL4Q11206 333 aa16.67■□□□□ 0.26
ATPAF2-202ENST00000462733 SPDYE7PQ495Y7 208 aa16.67■□□□□ 0.26
ATPAF2-202ENST00000462733 TMEM201Q5SNT2 666 aa16.67■□□□□ 0.26
ATPAF2-202ENST00000462733 PPP1R32Q7Z5V6 425 aa16.67■□□□□ 0.26
ATPAF2-202ENST00000462733 BTLAQ7Z6A9 289 aa16.67■□□□□ 0.26
ATPAF2-202ENST00000462733 ZNF248Q8NDW4 579 aa16.67■□□□□ 0.26
ATPAF2-202ENST00000462733 OR7G2Q8NG99 324 aa16.67■□□□□ 0.26
ATPAF2-202ENST00000462733 ELP4Q96EB1 424 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms