RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 FAM168AQ92567 244 aa15.32■□□□□ 0.04
TOP3A-202ENST00000461127 KISS1RQ969F8 398 aaPredicted RBP15.32■□□□□ 0.04
TOP3A-202ENST00000461127 FRG2BQ96QU4 278 aa15.32■□□□□ 0.04
TOP3A-202ENST00000461127 PLA2G12AQ9BZM1 189 aa15.32■□□□□ 0.04
TOP3A-202ENST00000461127 GSTO2Q9H4Y5 243 aa15.32■□□□□ 0.04
TOP3A-202ENST00000461127 ANKRA2Q9H9E1 313 aa15.32■□□□□ 0.04
TOP3A-202ENST00000461127 THAP1Q9NVV9 213 aa15.32■□□□□ 0.04
TOP3A-202ENST00000461127 TAS2R9Q9NYW1 312 aa15.32■□□□□ 0.04
TOP3A-202ENST00000461127 STK38LQ9Y2H1 464 aa15.32■□□□□ 0.04
TOP3A-202ENST00000461127 PCNX3Q9H6A9 2034 aa15.32■□□□□ 0.04
TOP3A-202ENST00000461127 FADS1O60427 444 aa15.31■□□□□ 0.04
TOP3A-202ENST00000461127 GCM2O75603 506 aaPredicted RBP15.31■□□□□ 0.04
TOP3A-202ENST00000461127 LYPLA1O75608 230 aaPredicted RBP15.31■□□□□ 0.04
TOP3A-202ENST00000461127 SNUPNO95149 360 aaKnown RBP15.31■□□□□ 0.04
TOP3A-202ENST00000461127 PABPC4LP0CB38 370 aaKnown RBP15.31■□□□□ 0.04
TOP3A-202ENST00000461127 IGHV4-31P0DP07 118 aa15.31■□□□□ 0.04
TOP3A-202ENST00000461127 IGFBP5P24593 272 aa15.31■□□□□ 0.04
TOP3A-202ENST00000461127 GZMKP49863 264 aa15.31■□□□□ 0.04
TOP3A-202ENST00000461127 CDH13P55290 713 aa15.31■□□□□ 0.04
TOP3A-202ENST00000461127 CLCQ05315 142 aa15.31■□□□□ 0.04
TOP3A-202ENST00000461127 LCP2Q13094 533 aa15.31■□□□□ 0.04
TOP3A-202ENST00000461127 IFT88Q13099 833 aa15.31■□□□□ 0.04
TOP3A-202ENST00000461127 RAB35Q15286 201 aa15.31■□□□□ 0.04
TOP3A-202ENST00000461127 TMEM201Q5SNT2 666 aa15.31■□□□□ 0.04
TOP3A-202ENST00000461127 RPS27LQ71UM5 84 aaKnown RBP15.31■□□□□ 0.04
TOP3A-202ENST00000461127 COMMD6Q7Z4G1 85 aa15.31■□□□□ 0.04
TOP3A-202ENST00000461127 CCDC116Q8IYX3 515 aa15.31■□□□□ 0.04
TOP3A-202ENST00000461127 SAMD14Q8IZD0 417 aaPredicted RBP15.31■□□□□ 0.04
TOP3A-202ENST00000461127 GABRG1Q8N1C3 465 aa15.31■□□□□ 0.04
TOP3A-202ENST00000461127 OR4N2Q8NGD1 307 aa15.31■□□□□ 0.04
TOP3A-202ENST00000461127 OR6Y1Q8NGX8 325 aa15.31■□□□□ 0.04
TOP3A-202ENST00000461127 PROX1Q92786 737 aa15.31■□□□□ 0.04
TOP3A-202ENST00000461127 TM4SF18Q96CE8 201 aa15.31■□□□□ 0.04
TOP3A-202ENST00000461127 REXO5Q96IC2 774 aaKnown RBP15.31■□□□□ 0.04
TOP3A-202ENST00000461127 ZNF681Q96N22 645 aa15.31■□□□□ 0.04
TOP3A-202ENST00000461127 NSUN5Q96P11 429 aaKnown RBP15.31■□□□□ 0.04
TOP3A-202ENST00000461127 CACNG6Q9BXT2 260 aa15.31■□□□□ 0.04
TOP3A-202ENST00000461127 POTEKPQ9BYX7 375 aa15.31■□□□□ 0.04
TOP3A-202ENST00000461127 CHODLQ9H9P2 273 aa15.31■□□□□ 0.04
TOP3A-202ENST00000461127 FAM120CQ9NX05 1096 aaKnown RBP15.31■□□□□ 0.04
TOP3A-202ENST00000461127 UTS2RQ9UKP6 389 aa15.31■□□□□ 0.04
TOP3A-202ENST00000461127 DPRXA6NFQ7 191 aa15.3■□□□□ 0.04
TOP3A-202ENST00000461127 ITM2AO43736 263 aa15.3■□□□□ 0.04
TOP3A-202ENST00000461127 CXCL13O43927 109 aa15.3■□□□□ 0.04
TOP3A-202ENST00000461127 SNNO75324 88 aaPredicted RBP15.3■□□□□ 0.04
TOP3A-202ENST00000461127 NME6O75414 186 aaPredicted RBP15.3■□□□□ 0.04
TOP3A-202ENST00000461127 ZNF17P17021 662 aa15.3■□□□□ 0.04
TOP3A-202ENST00000461127 TSPAN8P19075 237 aa15.3■□□□□ 0.04
TOP3A-202ENST00000461127 CCNG1P51959 295 aa15.3■□□□□ 0.04
TOP3A-202ENST00000461127 C21orf58P58505 322 aa15.3■□□□□ 0.04
TOP3A-202ENST00000461127 IRX1P78414 480 aaPredicted RBP15.3■□□□□ 0.04
TOP3A-202ENST00000461127 TSC22D1Q15714 1073 aa15.3■□□□□ 0.04
TOP3A-202ENST00000461127 ARL13AQ5H913 290 aaPredicted RBP15.3■□□□□ 0.04
TOP3A-202ENST00000461127 SH2D4BQ5SQS7 431 aa15.3■□□□□ 0.04
TOP3A-202ENST00000461127 FAM120AOSQ5T036 256 aa15.3■□□□□ 0.04
TOP3A-202ENST00000461127 PDSS1Q5T2R2 415 aa15.3■□□□□ 0.04
TOP3A-202ENST00000461127 IL17RELQ6ZVW7 336 aa15.3■□□□□ 0.04
TOP3A-202ENST00000461127 GALNT10Q86SR1 603 aa15.3■□□□□ 0.04
TOP3A-202ENST00000461127 KAT2AQ92830 837 aa15.3■□□□□ 0.04
TOP3A-202ENST00000461127 CHMP6Q96FZ7 201 aa15.3■□□□□ 0.04
TOP3A-202ENST00000461127 CDK15Q96Q40 435 aa15.3■□□□□ 0.04
TOP3A-202ENST00000461127 NOL11Q9H8H0 719 aaKnown RBP15.3■□□□□ 0.04
TOP3A-202ENST00000461127 MRTO4Q9UKD2 239 aaKnown RBP15.3■□□□□ 0.04
TOP3A-202ENST00000461127 SLC12A4Q9UP95 1085 aa15.3■□□□□ 0.04
TOP3A-202ENST00000461127 SHISA8B8ZZ34 492 aa15.29■□□□□ 0.04
TOP3A-202ENST00000461127 RAMP1O60894 148 aa15.29■□□□□ 0.04
TOP3A-202ENST00000461127 CRCPO75575 148 aa15.29■□□□□ 0.04
TOP3A-202ENST00000461127 ESRRBO95718 433 aa15.29■□□□□ 0.04
TOP3A-202ENST00000461127 OTCP00480 354 aa15.29■□□□□ 0.04
TOP3A-202ENST00000461127 CHRNGP07510 517 aa15.29■□□□□ 0.04
TOP3A-202ENST00000461127 CSF3P09919 207 aa15.29■□□□□ 0.04
TOP3A-202ENST00000461127 USF1P22415 310 aaPredicted RBP15.29■□□□□ 0.04
TOP3A-202ENST00000461127 ME2P23368 584 aa15.29■□□□□ 0.04
TOP3A-202ENST00000461127 TRA2BP62995 288 aaKnown RBP15.29■□□□□ 0.04
TOP3A-202ENST00000461127 LSM11P83369 360 aaKnown RBP eCLIP15.29■□□□□ 0.04
TOP3A-202ENST00000461127 C17orf67Q0P5P2 114 aa15.29■□□□□ 0.04
TOP3A-202ENST00000461127 ZNF155Q12901 538 aaPredicted RBP15.29■□□□□ 0.04
TOP3A-202ENST00000461127 P2RY6Q15077 328 aa15.29■□□□□ 0.04
TOP3A-202ENST00000461127 DECR1Q16698 335 aa15.29■□□□□ 0.04
TOP3A-202ENST00000461127 TMEM44Q2T9K0 475 aa15.29■□□□□ 0.04
TOP3A-202ENST00000461127 CYP27C1Q4G0S4 372 aa15.29■□□□□ 0.04
TOP3A-202ENST00000461127 MFSD12Q6NUT3 480 aa15.29■□□□□ 0.04
TOP3A-202ENST00000461127 C12orf54Q6X4T0 127 aa15.29■□□□□ 0.04
TOP3A-202ENST00000461127 GPRIN3Q6ZVF9 776 aa15.29■□□□□ 0.04
TOP3A-202ENST00000461127 ESPNLQ6ZVH7 1005 aa15.29■□□□□ 0.04
TOP3A-202ENST00000461127 ATG4DQ86TL0 474 aaPredicted RBP15.29■□□□□ 0.04
TOP3A-202ENST00000461127 LRRC34Q8IZ02 419 aa15.29■□□□□ 0.04
TOP3A-202ENST00000461127 ZNF525Q8N782 197 aa15.29■□□□□ 0.04
TOP3A-202ENST00000461127 OR9A2Q8NGT5 310 aa15.29■□□□□ 0.04
TOP3A-202ENST00000461127 OR2V1Q8NHB1 315 aa15.29■□□□□ 0.04
TOP3A-202ENST00000461127 RADILQ96JH8 1075 aa15.29■□□□□ 0.04
TOP3A-202ENST00000461127 C7orf26Q96N11 449 aa15.29■□□□□ 0.04
TOP3A-202ENST00000461127 TBL1XR1Q9BZK7 514 aa15.29■□□□□ 0.04
TOP3A-202ENST00000461127 SHCBP1LQ9BZQ2 653 aa15.29■□□□□ 0.04
TOP3A-202ENST00000461127 NSRP1Q9H0G5 558 aaKnown RBP15.29■□□□□ 0.04
TOP3A-202ENST00000461127 ELOVL6Q9H5J4 265 aa15.29■□□□□ 0.04
TOP3A-202ENST00000461127 MID1IP1Q9NPA3 183 aa15.29■□□□□ 0.04
TOP3A-202ENST00000461127 SLCO1B3Q9NPD5 702 aa15.29■□□□□ 0.04
TOP3A-202ENST00000461127 CBLN4Q9NTU7 201 aa15.29■□□□□ 0.04
TOP3A-202ENST00000461127 GIMAP4Q9NUV9 329 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms