RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 DCAF13Q9NV06 445 aaKnown RBP2.49□□□□□ -2.01
HPS3-203ENST00000460822 DUS2Q9NX74 493 aaKnown RBP2.49□□□□□ -2.01
HPS3-203ENST00000460822 TAS2R16Q9NYV7 291 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 THEGQ9P2T0 379 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 MBD2Q9UBB5 411 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 LCMT1Q9UIC8 334 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 RNF6Q9Y252 685 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 DOCK7Q96N67 2140 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 KIAA0232Q92628 1395 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 ARID2Q68CP9 1835 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 CPSF1Q10570 1443 aaKnown RBP2.49□□□□□ -2.01
HPS3-203ENST00000460822 RIMS2Q9UQ26 1411 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 NRKQ7Z2Y5 1582 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 NOTCH4Q99466 2003 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 IGHV3-20A0A0C4DH32 117 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 IQCMA0A1B0GVH7 501 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 ESYT2A0FGR8 921 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 HEATR9A2RTY3 570 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 OR2AG2A6NM03 316 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 SNTNA6NMZ2 147 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 K7EQD1 137 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 BTN3A3O00478 584 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 FBP2O00757 339 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 LINC01565O15544 149 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 ZNF749O43361 778 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 SLITRK3O94933 977 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 NDUFB10O96000 172 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 ZNF853P0CG23 659 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 GNB3P16520 340 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 UCP1P25874 307 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 PDHA2P29803 388 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 CHRNB4P30926 498 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 MAGEA8P43361 318 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 SYKP43405 635 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 ETV1P50549 477 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 NDST2P52849 883 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 CDH4P55283 916 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 IRX3P78415 501 aaPredicted RBP2.49□□□□□ -2.01
HPS3-203ENST00000460822 MECOMQ03112 1051 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 KIAA0141Q14154 515 aaPredicted RBP2.49□□□□□ -2.01
HPS3-203ENST00000460822 TMEM187Q14656 261 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 TMEM44Q2T9K0 475 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 HLA-BQ31612 363 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 GGTA1PQ4G0N0 100 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 CTSL3PQ5NE16 218 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 CELF3Q5SZQ8 465 aaKnown RBP2.49□□□□□ -2.01
HPS3-203ENST00000460822 GFI1BQ5VTD9 330 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 LRRC66Q68CR7 880 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 PWWP2BQ6NUJ5 590 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 BHLHB9Q6PI77 547 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 KCNIP4Q6PIL6 250 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 ATRAIDQ6UW56 229 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 HACD2Q6Y1H2 254 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 ADAMTSL5Q6ZMM2 481 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 PLA2G4DQ86XP0 818 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 SLC38A6Q8IZM9 456 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 OFCC1Q8IZS5 231 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 SLC22A8Q8TCC7 542 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 NR4A3Q92570 626 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 DLX4Q92988 240 aaPredicted RBP2.49□□□□□ -2.01
HPS3-203ENST00000460822 SH3YL1Q96HL8 342 aaPredicted RBP2.49□□□□□ -2.01
HPS3-203ENST00000460822 AMDHD1Q96NU7 426 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 RPRD1AQ96P16 312 aaPredicted RBP2.49□□□□□ -2.01
HPS3-203ENST00000460822 AGAP3Q96P47 875 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 RCHY1Q96PM5 261 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 EPYCQ99645 322 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 TTYH2Q9BSA4 534 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 UPF3BQ9BZI7 483 aaKnown RBP2.49□□□□□ -2.01
HPS3-203ENST00000460822 NT5DC2Q9H857 520 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 B3GAT2Q9NPZ5 323 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 ZNF446Q9NWS9 450 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 MDFICQ9P1T7 246 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 GNG12Q9UBI6 72 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 RPH3ALQ9UNE2 315 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 PYGO1Q9Y3Y4 419 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 CCDC171Q6TFL3 1326 aa2.48□□□□□ -2.01
HPS3-203ENST00000460822 MROH5Q6ZUA9 1318 aa2.48□□□□□ -2.01
HPS3-203ENST00000460822 PHLPP2Q6ZVD8 1323 aa2.48□□□□□ -2.01
HPS3-203ENST00000460822 EVC2Q86UK5 1308 aa2.48□□□□□ -2.01
HPS3-203ENST00000460822 RAD50Q92878 1312 aa2.48□□□□□ -2.01
HPS3-203ENST00000460822 GREB1LQ9C091 1923 aaPredicted RBP2.48□□□□□ -2.01
HPS3-203ENST00000460822 MON2Q7Z3U7 1717 aa2.48□□□□□ -2.01
HPS3-203ENST00000460822 LAMA4Q16363 1823 aa2.48□□□□□ -2.01
HPS3-203ENST00000460822 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.48□□□□□ -2.01
HPS3-203ENST00000460822 TRBV5-4A0A0C4DH59 114 aa2.48□□□□□ -2.01
HPS3-203ENST00000460822 BTBD17A6NE02 478 aa2.48□□□□□ -2.01
HPS3-203ENST00000460822 FAM74A7A6NL05 159 aa2.48□□□□□ -2.01
HPS3-203ENST00000460822 USP27XA6NNY8 438 aa2.48□□□□□ -2.01
HPS3-203ENST00000460822 TCP11X1B4DZS4 312 aa2.48□□□□□ -2.01
HPS3-203ENST00000460822 STX7O15400 261 aaKnown RBP2.48□□□□□ -2.01
HPS3-203ENST00000460822 NBR2O15453 112 aa2.48□□□□□ -2.01
HPS3-203ENST00000460822 TIMM8AO60220 97 aaPredicted RBP2.48□□□□□ -2.01
HPS3-203ENST00000460822 TPST2O60704 377 aa2.48□□□□□ -2.01
HPS3-203ENST00000460822 SCGNO76038 276 aa2.48□□□□□ -2.01
HPS3-203ENST00000460822 PDE5AO76074 875 aa2.48□□□□□ -2.01
HPS3-203ENST00000460822 NXPH4O95158 308 aa2.48□□□□□ -2.01
HPS3-203ENST00000460822 ALPIP09923 528 aa2.48□□□□□ -2.01
HPS3-203ENST00000460822 OR9G9P0C7N8 305 aa2.48□□□□□ -2.01
HPS3-203ENST00000460822 H2AFXP16104 143 aaPredicted RBP2.48□□□□□ -2.01
HPS3-203ENST00000460822 NCK1P16333 377 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms