RNA–Protein interactions for RNA: ENST00000460428.5

SFPQ-202, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-202ENST00000460428 OR8K3Q8NH51 312 aa7.42□□□□□ -1.22
SFPQ-202ENST00000460428 NUBPLQ8TB37 319 aa7.42□□□□□ -1.22
SFPQ-202ENST00000460428 BRIX1Q8TDN6 353 aaKnown RBP7.42□□□□□ -1.22
SFPQ-202ENST00000460428 TMEM239Q8WW34 195 aa7.42□□□□□ -1.22
SFPQ-202ENST00000460428 OSTF1Q92882 214 aa7.42□□□□□ -1.22
SFPQ-202ENST00000460428 MYDGFQ969H8 173 aa7.42□□□□□ -1.22
SFPQ-202ENST00000460428 MYCBPQ99417 103 aaPredicted RBP7.42□□□□□ -1.22
SFPQ-202ENST00000460428 CTRCQ99895 268 aa7.42□□□□□ -1.22
SFPQ-202ENST00000460428 CDCA4Q9BXL8 241 aa7.42□□□□□ -1.22
SFPQ-202ENST00000460428 NXF5Q9H1B4 397 aaKnown RBP7.42□□□□□ -1.22
SFPQ-202ENST00000460428 WDR54Q9H977 334 aa7.42□□□□□ -1.22
SFPQ-202ENST00000460428 C12orf10Q9HB07 376 aa7.42□□□□□ -1.22
SFPQ-202ENST00000460428 PNO1Q9NRX1 252 aaKnown RBP7.42□□□□□ -1.22
SFPQ-202ENST00000460428 RASSF1Q9NS23 344 aa7.42□□□□□ -1.22
SFPQ-202ENST00000460428 ERVK-18Q9QC07 812 aa7.42□□□□□ -1.22
SFPQ-202ENST00000460428 AASSQ9UDR5 926 aa7.42□□□□□ -1.22
SFPQ-202ENST00000460428 ICAM5Q9UMF0 924 aa7.42□□□□□ -1.22
SFPQ-202ENST00000460428 TMEM5Q9Y2B1 443 aa7.42□□□□□ -1.22
SFPQ-202ENST00000460428 NTNG1Q9Y2I2 539 aa7.42□□□□□ -1.22
SFPQ-202ENST00000460428 COL27A1Q8IZC6 1860 aaPredicted RBP7.42□□□□□ -1.22
SFPQ-202ENST00000460428 USP34Q70CQ2 3546 aa7.42□□□□□ -1.22
SFPQ-202ENST00000460428 SPTBP11277 2137 aa7.42□□□□□ -1.22
SFPQ-202ENST00000460428 FER1L5A0AVI2 2057 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 A0A1W2PQ72 361 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 EFCAB10A6NFE3 127 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 ALG1L2C9J202 215 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 PTGES3LE9PB15 166 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 FAM20BO75063 409 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 ADAM11O75078 769 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 ALOX12BO75342 701 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 PTP4A3O75365 173 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 LDOC1O95751 146 aaPredicted RBP7.41□□□□□ -1.22
SFPQ-202ENST00000460428 IGFBP1P08833 259 aaPredicted RBP7.41□□□□□ -1.22
SFPQ-202ENST00000460428 NAGAP17050 411 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 SLC5A2P31639 672 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 CSTF2P33240 577 aaKnown RBP eCLIP7.41□□□□□ -1.22
SFPQ-202ENST00000460428 MASP1P48740 699 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 PCYT1AP49585 367 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 LSAMPQ13449 338 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 GINS1Q14691 196 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 TBCEQ15813 527 aaPredicted RBP7.41□□□□□ -1.22
SFPQ-202ENST00000460428 MFSD4BQ5TF39 518 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 C1orf189Q5VU69 101 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 TMEM236Q5W0B7 351 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 ACSM5Q6NUN0 579 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 RPL13AP3Q6NVV1 102 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 SLC27A4Q6P1M0 643 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 ULK3Q6PHR2 472 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 ZC3H14Q6PJT7 736 aaKnown RBP7.41□□□□□ -1.22
SFPQ-202ENST00000460428 WDR88Q6ZMY6 472 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 ZNF620Q6ZNG0 422 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 PTCHD4Q6ZW05 846 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 ANKRD37Q7Z713 158 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 ANKRD13BQ86YJ7 626 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 ERI1Q8IV48 349 aaKnown RBP7.41□□□□□ -1.22
SFPQ-202ENST00000460428 NRMQ8IXM6 262 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 C9orf40Q8IXQ3 194 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 NLGN4XQ8N0W4 816 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 ZNF321PQ8N8H1 164 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 ZNF527Q8NB42 609 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 B3GNT7Q8NFL0 401 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 OR2I1PQ8NGU4 316 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 C9orf43Q8TAL5 461 aaPredicted RBP7.41□□□□□ -1.22
SFPQ-202ENST00000460428 ZFAND2BQ8WV99 257 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 RNF138Q8WVD3 245 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 DNAJA4Q8WW22 397 aaPredicted RBP7.41□□□□□ -1.22
SFPQ-202ENST00000460428 LIPHQ8WWY8 451 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 FCGR1BQ92637 280 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 CRELD1Q96HD1 420 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 SPSB2Q99619 263 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 WDR77Q9BQA1 342 aaPredicted RBP7.41□□□□□ -1.22
SFPQ-202ENST00000460428 COPS4Q9BT78 406 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 YIPF2Q9BWQ6 316 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 OR8D2Q9GZM6 311 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 WWTR1Q9GZV5 400 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 LHPPQ9H008 270 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 ARRDC1-AS1Q9H2J1 176 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 GPN2Q9H9Y4 310 aaPredicted RBP7.41□□□□□ -1.22
SFPQ-202ENST00000460428 ACOT13Q9NPJ3 140 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 CTPS2Q9NRF8 586 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 CLN6Q9NWW5 311 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 OCIAD1Q9NX40 245 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 IMPAD1Q9NX62 359 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 FLRT3Q9NZU0 649 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 CTSFQ9UBX1 484 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 NXT1Q9UKK6 140 aaKnown RBP7.41□□□□□ -1.22
SFPQ-202ENST00000460428 MKL2Q9ULH7 1088 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 SLC7A7Q9UM01 511 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 OR10H1Q9Y4A9 318 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 CDH10Q9Y6N8 788 aa7.41□□□□□ -1.22
SFPQ-202ENST00000460428 A0A087WUJ7 227 aa7.4□□□□□ -1.22
SFPQ-202ENST00000460428 LOC102723996A0A087X1L8 192 aa7.4□□□□□ -1.22
SFPQ-202ENST00000460428 A0A1B0GWA3 101 aa7.4□□□□□ -1.22
SFPQ-202ENST00000460428 OR6C70A6NIJ9 312 aa7.4□□□□□ -1.22
SFPQ-202ENST00000460428 SAGE2PA6NJ88 616 aa7.4□□□□□ -1.22
SFPQ-202ENST00000460428 KDM4EB2RXH2 506 aaPredicted RBP7.4□□□□□ -1.22
SFPQ-202ENST00000460428 IDSB3KWA1 339 aa7.4□□□□□ -1.22
SFPQ-202ENST00000460428 H3BN98 237 aa7.4□□□□□ -1.22
SFPQ-202ENST00000460428 MEN1O00255 615 aa7.4□□□□□ -1.22
SFPQ-202ENST00000460428 ADAM10O14672 748 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms