RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 IL23RQ5VWK5 629 aa20.4■□□□□ 0.86
PTPN4-207ENST00000460162 ZNF550Q7Z398 422 aa20.4■□□□□ 0.86
PTPN4-207ENST00000460162 CXorf67Q86X51 503 aaPredicted RBP20.4■□□□□ 0.86
PTPN4-207ENST00000460162 POC1BQ8TC44 478 aa20.4■□□□□ 0.86
PTPN4-207ENST00000460162 ADAMTS15Q8TE58 950 aa20.4■□□□□ 0.86
PTPN4-207ENST00000460162 COQ8BQ96D53 544 aa20.4■□□□□ 0.86
PTPN4-207ENST00000460162 MARK4Q96L34 752 aa20.4■□□□□ 0.86
PTPN4-207ENST00000460162 KLHL15Q96M94 604 aa20.4■□□□□ 0.86
PTPN4-207ENST00000460162 PIP5K1AQ99755 562 aa20.4■□□□□ 0.86
PTPN4-207ENST00000460162 HOXD1Q9GZZ0 328 aa20.4■□□□□ 0.86
PTPN4-207ENST00000460162 TMEM185BQ9H7F4 350 aa20.4■□□□□ 0.86
PTPN4-207ENST00000460162 CXorf36Q9H7Y0 433 aa20.4■□□□□ 0.86
PTPN4-207ENST00000460162 FANCFQ9NPI8 374 aa20.4■□□□□ 0.86
PTPN4-207ENST00000460162 ZDHHC2Q9UIJ5 367 aa20.4■□□□□ 0.86
PTPN4-207ENST00000460162 FAF1Q9UNN5 650 aaPredicted RBP20.4■□□□□ 0.86
PTPN4-207ENST00000460162 NIPBLQ6KC79 2804 aaeCLIP20.4■□□□□ 0.86
PTPN4-207ENST00000460162 TNFSF11O14788 317 aa20.39■□□□□ 0.85
PTPN4-207ENST00000460162 TYROBPO43914 113 aa20.39■□□□□ 0.85
PTPN4-207ENST00000460162 C6orf47O95873 294 aa20.39■□□□□ 0.85
PTPN4-207ENST00000460162 PPP3CBP16298 524 aa20.39■□□□□ 0.85
PTPN4-207ENST00000460162 IL11P20809 199 aa20.39■□□□□ 0.85
PTPN4-207ENST00000460162 FOXF1Q12946 379 aa20.39■□□□□ 0.85
PTPN4-207ENST00000460162 MAD2L1Q13257 205 aaPredicted RBP20.39■□□□□ 0.85
PTPN4-207ENST00000460162 SHEQ5VZ18 495 aa20.39■□□□□ 0.85
PTPN4-207ENST00000460162 HBMQ6B0K9 141 aa20.39■□□□□ 0.85
PTPN4-207ENST00000460162 KRTAP1-3Q8IUG1 177 aa20.39■□□□□ 0.85
PTPN4-207ENST00000460162 RIMKLAQ8IXN7 391 aa20.39■□□□□ 0.85
PTPN4-207ENST00000460162 PHOSPHO1Q8TCT1 267 aa20.39■□□□□ 0.85
PTPN4-207ENST00000460162 PIGTQ969N2 578 aa20.39■□□□□ 0.85
PTPN4-207ENST00000460162 TUBGCP3Q96CW5 907 aa20.39■□□□□ 0.85
PTPN4-207ENST00000460162 BHLHE41Q9C0J9 482 aaPredicted RBP20.39■□□□□ 0.85
PTPN4-207ENST00000460162 GPATCH2Q9NW75 528 aa20.39■□□□□ 0.85
PTPN4-207ENST00000460162 CLEC4AQ9UMR7 237 aa20.39■□□□□ 0.85
PTPN4-207ENST00000460162 H3BNH8 94 aa20.38■□□□□ 0.85
PTPN4-207ENST00000460162 ADH6P28332 368 aa20.38■□□□□ 0.85
PTPN4-207ENST00000460162 ETV4P43268 484 aa20.38■□□□□ 0.85
PTPN4-207ENST00000460162 C21orf58P58505 322 aa20.38■□□□□ 0.85
PTPN4-207ENST00000460162 NKX6-1P78426 367 aaPredicted RBP20.38■□□□□ 0.85
PTPN4-207ENST00000460162 EXOC3L2Q2M3D2 409 aa20.38■□□□□ 0.85
PTPN4-207ENST00000460162 BHLHB9Q6PI77 547 aa20.38■□□□□ 0.85
PTPN4-207ENST00000460162 LRRC75A-AS1Q8N1F1 130 aa20.38■□□□□ 0.85
PTPN4-207ENST00000460162 KRTCAP2Q8N6L1 136 aa20.38■□□□□ 0.85
PTPN4-207ENST00000460162 ZIM3Q96PE6 472 aa20.38■□□□□ 0.85
PTPN4-207ENST00000460162 KLHDC3Q9BQ90 382 aa20.38■□□□□ 0.85
PTPN4-207ENST00000460162 KLHL4Q9C0H6 718 aa20.38■□□□□ 0.85
PTPN4-207ENST00000460162 ACTL7BQ9Y614 415 aa20.38■□□□□ 0.85
PTPN4-207ENST00000460162 A0A0J9YW62 118 aa20.37■□□□□ 0.85
PTPN4-207ENST00000460162 FPR1P21462 350 aa20.37■□□□□ 0.85
PTPN4-207ENST00000460162 P2RX1P51575 399 aa20.37■□□□□ 0.85
PTPN4-207ENST00000460162 KLHL26Q53HC5 615 aa20.37■□□□□ 0.85
PTPN4-207ENST00000460162 C20orf204Q6ZNR8 217 aa20.37■□□□□ 0.85
PTPN4-207ENST00000460162 LILRA2Q8N149 483 aa20.37■□□□□ 0.85
PTPN4-207ENST00000460162 ZC3HAV1LQ96H79 300 aaKnown RBP20.37■□□□□ 0.85
PTPN4-207ENST00000460162 DUSP26Q9BV47 211 aa20.37■□□□□ 0.85
PTPN4-207ENST00000460162 TMEM109Q9BVC6 243 aa20.37■□□□□ 0.85
PTPN4-207ENST00000460162 ASIC5Q9NY37 505 aa20.37■□□□□ 0.85
PTPN4-207ENST00000460162 ICAM5Q9UMF0 924 aa20.37■□□□□ 0.85
PTPN4-207ENST00000460162 NUP214P35658 2090 aaPredicted RBP20.37■□□□□ 0.85
PTPN4-207ENST00000460162 NPIPB9F8W1W9 429 aa20.36■□□□□ 0.85
PTPN4-207ENST00000460162 ARHGEF9O43307 516 aa20.36■□□□□ 0.85
PTPN4-207ENST00000460162 NUDT14O95848 222 aa20.36■□□□□ 0.85
PTPN4-207ENST00000460162 OPN1LWP04000 364 aa20.36■□□□□ 0.85
PTPN4-207ENST00000460162 TUBBP07437 444 aa20.36■□□□□ 0.85
PTPN4-207ENST00000460162 PABPC4LP0CB38 370 aaKnown RBP20.36■□□□□ 0.85
PTPN4-207ENST00000460162 G6PDP11413 515 aa20.36■□□□□ 0.85
PTPN4-207ENST00000460162 CREB1P16220 341 aa20.36■□□□□ 0.85
PTPN4-207ENST00000460162 AGTR1P30556 359 aa20.36■□□□□ 0.85
PTPN4-207ENST00000460162 ATP12AP54707 1039 aa20.36■□□□□ 0.85
PTPN4-207ENST00000460162 ACKR1Q16570 336 aa20.36■□□□□ 0.85
PTPN4-207ENST00000460162 ZNF239Q16600 458 aaKnown RBP20.36■□□□□ 0.85
PTPN4-207ENST00000460162 SMU1Q2TAY7 513 aa20.36■□□□□ 0.85
PTPN4-207ENST00000460162 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.36■□□□□ 0.85
PTPN4-207ENST00000460162 GTF2IRD2BQ6EKJ0 949 aa20.36■□□□□ 0.85
PTPN4-207ENST00000460162 WDR93Q6P2C0 686 aa20.36■□□□□ 0.85
PTPN4-207ENST00000460162 CBLN3Q6UW01 205 aa20.36■□□□□ 0.85
PTPN4-207ENST00000460162 BEND4Q6ZU67 534 aa20.36■□□□□ 0.85
PTPN4-207ENST00000460162 BIVMQ86UB2 503 aa20.36■□□□□ 0.85
PTPN4-207ENST00000460162 GTF2IRD2Q86UP8 949 aa20.36■□□□□ 0.85
PTPN4-207ENST00000460162 STK32CQ86UX6 486 aa20.36■□□□□ 0.85
PTPN4-207ENST00000460162 RNF128Q8TEB7 428 aa20.36■□□□□ 0.85
PTPN4-207ENST00000460162 CPNE4Q96A23 557 aaPredicted RBP20.36■□□□□ 0.85
PTPN4-207ENST00000460162 C18orf12Q96KH6 178 aa20.36■□□□□ 0.85
PTPN4-207ENST00000460162 HS3ST6Q96QI5 342 aa20.36■□□□□ 0.85
PTPN4-207ENST00000460162 UBTD1Q9HAC8 227 aa20.36■□□□□ 0.85
PTPN4-207ENST00000460162 NOP53Q9NZM5 478 aaKnown RBP20.36■□□□□ 0.85
PTPN4-207ENST00000460162 GPC6Q9Y625 555 aaPredicted RBP20.36■□□□□ 0.85
PTPN4-207ENST00000460162 NPIPA5A0A0B4J1W7 369 aa20.35■□□□□ 0.85
PTPN4-207ENST00000460162 GJE1A6NN92 205 aa20.35■□□□□ 0.85
PTPN4-207ENST00000460162 NPIPA7E9PJI5 369 aa20.35■□□□□ 0.85
PTPN4-207ENST00000460162 CFLARO15519 480 aa20.35■□□□□ 0.85
PTPN4-207ENST00000460162 SMPD2O60906 423 aa20.35■□□□□ 0.85
PTPN4-207ENST00000460162 NPIPA8P0DM63 369 aa20.35■□□□□ 0.85
PTPN4-207ENST00000460162 NID1P14543 1247 aa20.35■□□□□ 0.85
PTPN4-207ENST00000460162 LOXP28300 417 aaPredicted RBP20.35■□□□□ 0.85
PTPN4-207ENST00000460162 SFTPDP35247 375 aa20.35■□□□□ 0.85
PTPN4-207ENST00000460162 SOAT1P35610 550 aa20.35■□□□□ 0.85
PTPN4-207ENST00000460162 HBA1P69905 142 aa20.35■□□□□ 0.85
PTPN4-207ENST00000460162 EMX2Q04743 252 aa20.35■□□□□ 0.85
PTPN4-207ENST00000460162 BEX5Q5H9J7 111 aa20.35■□□□□ 0.85
PTPN4-207ENST00000460162 STAC2Q6ZMT1 411 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms