RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 CDK6Q00534 326 aa9.72□□□□□ -0.85
UBR4-208ENST00000459947 HSPB2Q16082 182 aa9.72□□□□□ -0.85
UBR4-208ENST00000459947 C3AR1Q16581 482 aa9.72□□□□□ -0.85
UBR4-208ENST00000459947 PAGE3Q5JUK9 113 aa9.72□□□□□ -0.85
UBR4-208ENST00000459947 PDZK1Q5T2W1 519 aa9.72□□□□□ -0.85
UBR4-208ENST00000459947 DLEU7Q6UYE1 221 aa9.72□□□□□ -0.85
UBR4-208ENST00000459947 ANKFN1Q8N957 763 aa9.72□□□□□ -0.85
UBR4-208ENST00000459947 NUDT8Q8WV74 236 aa9.72□□□□□ -0.85
UBR4-208ENST00000459947 THUMPD3Q9BV44 507 aaKnown RBP9.72□□□□□ -0.85
UBR4-208ENST00000459947 UGT2B28Q9BY64 529 aa9.72□□□□□ -0.85
UBR4-208ENST00000459947 TSPAN10Q9H1Z9 355 aaPredicted RBP9.72□□□□□ -0.85
UBR4-208ENST00000459947 SLC38A1Q9H2H9 487 aa9.72□□□□□ -0.85
UBR4-208ENST00000459947 ERRFI1Q9UJM3 462 aaPredicted RBP9.72□□□□□ -0.85
UBR4-208ENST00000459947 TLN1Q9Y490 2541 aaKnown RBP9.71□□□□□ -0.85
UBR4-208ENST00000459947 CD8B2A6NJW9 211 aa9.71□□□□□ -0.85
UBR4-208ENST00000459947 CRHP06850 196 aa9.71□□□□□ -0.85
UBR4-208ENST00000459947 RFPL3SP0C7P2 107 aa9.71□□□□□ -0.85
UBR4-208ENST00000459947 COX4I1P13073 169 aa9.71□□□□□ -0.85
UBR4-208ENST00000459947 NID1P14543 1247 aa9.71□□□□□ -0.85
UBR4-208ENST00000459947 PEX19P40855 299 aa9.71□□□□□ -0.85
UBR4-208ENST00000459947 MVDP53602 400 aa9.71□□□□□ -0.85
UBR4-208ENST00000459947 KCNJ10P78508 379 aa9.71□□□□□ -0.85
UBR4-208ENST00000459947 SELENBP1Q13228 472 aa9.71□□□□□ -0.85
UBR4-208ENST00000459947 GXYLT1Q4G148 440 aa9.71□□□□□ -0.85
UBR4-208ENST00000459947 DHRS4L2Q6PKH6 230 aa9.71□□□□□ -0.85
UBR4-208ENST00000459947 B3GNT6Q6ZMB0 384 aa9.71□□□□□ -0.85
UBR4-208ENST00000459947 PIGWQ7Z7B1 504 aa9.71□□□□□ -0.85
UBR4-208ENST00000459947 CCDC197Q8NCU1 140 aa9.71□□□□□ -0.85
UBR4-208ENST00000459947 TM9SF2Q99805 663 aa9.71□□□□□ -0.85
UBR4-208ENST00000459947 ACER3Q9NUN7 267 aa9.71□□□□□ -0.85
UBR4-208ENST00000459947 MED11Q9P086 117 aa9.71□□□□□ -0.85
UBR4-208ENST00000459947 KCNE3Q9Y6H6 103 aa9.71□□□□□ -0.85
UBR4-208ENST00000459947 FRYQ5TBA9 3013 aa9.71□□□□□ -0.85
UBR4-208ENST00000459947 ETV2O00321 342 aaPredicted RBP9.71□□□□□ -0.86
UBR4-208ENST00000459947 SHOX2O60902 331 aaPredicted RBP9.71□□□□□ -0.86
UBR4-208ENST00000459947 UGT2B17O75795 530 aa9.71□□□□□ -0.86
UBR4-208ENST00000459947 BCHEP06276 602 aa9.71□□□□□ -0.86
UBR4-208ENST00000459947 PABPC4LP0CB38 370 aaKnown RBP9.71□□□□□ -0.86
UBR4-208ENST00000459947 GP1BBP13224 206 aa9.71□□□□□ -0.86
UBR4-208ENST00000459947 ETFAP13804 333 aa9.71□□□□□ -0.86
UBR4-208ENST00000459947 IL7RP16871 459 aa9.71□□□□□ -0.86
UBR4-208ENST00000459947 PRKAR1BP31321 381 aa9.71□□□□□ -0.86
UBR4-208ENST00000459947 PCGF2P35227 344 aa9.71□□□□□ -0.86
UBR4-208ENST00000459947 ART3Q13508 389 aa9.71□□□□□ -0.86
UBR4-208ENST00000459947 WIPI1Q5MNZ9 446 aaPredicted RBP9.71□□□□□ -0.86
UBR4-208ENST00000459947 C1QL3Q5VWW1 255 aa9.71□□□□□ -0.86
UBR4-208ENST00000459947 OR2A2Q6IF42 318 aa9.71□□□□□ -0.86
UBR4-208ENST00000459947 TMEM19Q96HH6 336 aa9.71□□□□□ -0.86
UBR4-208ENST00000459947 RNF145Q96MT1 663 aa9.71□□□□□ -0.86
UBR4-208ENST00000459947 FAM107BQ9H098 131 aa9.71□□□□□ -0.86
UBR4-208ENST00000459947 MYLK2Q9H1R3 596 aa9.71□□□□□ -0.86
UBR4-208ENST00000459947 SLC24A3Q9HC58 644 aa9.71□□□□□ -0.86
UBR4-208ENST00000459947 VAPAQ9P0L0 249 aa9.71□□□□□ -0.86
UBR4-208ENST00000459947 L3MBTL1Q9Y468 752 aa9.71□□□□□ -0.86
UBR4-208ENST00000459947 CNTRLQ7Z7A1 2325 aa9.71□□□□□ -0.86
UBR4-208ENST00000459947 NPIPA2E9PIF3 369 aa9.71□□□□□ -0.86
UBR4-208ENST00000459947 NPIPA3F8WFD2 350 aa9.71□□□□□ -0.86
UBR4-208ENST00000459947 NME6O75414 186 aaPredicted RBP9.71□□□□□ -0.86
UBR4-208ENST00000459947 NUDT14O95848 222 aa9.71□□□□□ -0.86
UBR4-208ENST00000459947 BMP7P18075 431 aa9.71□□□□□ -0.86
UBR4-208ENST00000459947 SCARB2Q14108 478 aa9.71□□□□□ -0.86
UBR4-208ENST00000459947 TMEM44Q2T9K0 475 aa9.71□□□□□ -0.86
UBR4-208ENST00000459947 YRDCQ86U90 279 aaKnown RBP9.71□□□□□ -0.86
UBR4-208ENST00000459947 OR52P1PQ8NH57 321 aa9.71□□□□□ -0.86
UBR4-208ENST00000459947 LRRC58Q96CX6 371 aa9.71□□□□□ -0.86
UBR4-208ENST00000459947 ECSITQ9BQ95 431 aa9.71□□□□□ -0.86
UBR4-208ENST00000459947 MED17Q9NVC6 651 aa9.71□□□□□ -0.86
UBR4-208ENST00000459947 MKLN1Q9UL63 735 aa9.71□□□□□ -0.86
UBR4-208ENST00000459947 CAMK2AQ9UQM7 478 aa9.71□□□□□ -0.86
UBR4-208ENST00000459947 GFRA1P56159 465 aa9.7□□□□□ -0.86
UBR4-208ENST00000459947 RAC1P63000 192 aa9.7□□□□□ -0.86
UBR4-208ENST00000459947 GTDC1Q4AE62 458 aa9.7□□□□□ -0.86
UBR4-208ENST00000459947 DOLPP1Q86YN1 238 aa9.7□□□□□ -0.86
UBR4-208ENST00000459947 CHERPQ8IWX8 916 aaKnown RBP9.7□□□□□ -0.86
UBR4-208ENST00000459947 ULK2Q8IYT8 1036 aa9.7□□□□□ -0.86
UBR4-208ENST00000459947 PNPT1Q8TCS8 783 aaKnown RBP9.7□□□□□ -0.86
UBR4-208ENST00000459947 RND1Q92730 232 aa9.7□□□□□ -0.86
UBR4-208ENST00000459947 POP5Q969H6 163 aaKnown RBP9.7□□□□□ -0.86
UBR4-208ENST00000459947 LRRC37BQ96QE4 947 aa9.7□□□□□ -0.86
UBR4-208ENST00000459947 DMRTA2Q96SC8 542 aa9.7□□□□□ -0.86
UBR4-208ENST00000459947 CCDC106Q9BWC9 280 aa9.7□□□□□ -0.86
UBR4-208ENST00000459947 SLC25A37Q9NYZ2 338 aa9.7□□□□□ -0.86
UBR4-208ENST00000459947 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.7□□□□□ -0.86
UBR4-208ENST00000459947 FAM220BPB1ANY3 271 aa9.7□□□□□ -0.86
UBR4-208ENST00000459947 EPPINO95925 133 aa9.7□□□□□ -0.86
UBR4-208ENST00000459947 CHRM4P08173 479 aa9.7□□□□□ -0.86
UBR4-208ENST00000459947 APOBEC1P41238 236 aaKnown RBP9.7□□□□□ -0.86
UBR4-208ENST00000459947 UQCRFS1P47985 274 aa9.7□□□□□ -0.86
UBR4-208ENST00000459947 SEC24CP53992 1094 aa9.7□□□□□ -0.86
UBR4-208ENST00000459947 COPZ1P61923 177 aa9.7□□□□□ -0.86
UBR4-208ENST00000459947 ZNF117Q03924 483 aa9.7□□□□□ -0.86
UBR4-208ENST00000459947 CHRNEQ04844 493 aa9.7□□□□□ -0.86
UBR4-208ENST00000459947 VEZF1Q14119 521 aa9.7□□□□□ -0.86
UBR4-208ENST00000459947 SYPL1Q16563 259 aa9.7□□□□□ -0.86
UBR4-208ENST00000459947 PLPPR5Q32ZL2 321 aa9.7□□□□□ -0.86
UBR4-208ENST00000459947 COX20Q5RI15 118 aa9.7□□□□□ -0.86
UBR4-208ENST00000459947 C5orf46Q6UWT4 87 aa9.7□□□□□ -0.86
UBR4-208ENST00000459947 MAMDC2Q7Z304 686 aaPredicted RBP9.7□□□□□ -0.86
UBR4-208ENST00000459947 ZAR1Q86SH2 424 aa9.7□□□□□ -0.86
UBR4-208ENST00000459947 SLC38A5Q8WUX1 472 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms