RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 ELAVL1Q15717 326 aaKnown RBP9.54□□□□□ -0.88
USP39-210ENST00000459775 FIGNL1Q6PIW4 674 aa9.54□□□□□ -0.88
USP39-210ENST00000459775 KIRREL2Q6UWL6 708 aa9.54□□□□□ -0.88
USP39-210ENST00000459775 CPEB2Q7Z5Q1 589 aaKnown RBP9.54□□□□□ -0.88
USP39-210ENST00000459775 ARHGAP24Q8N264 748 aa9.54□□□□□ -0.88
USP39-210ENST00000459775 OR2Y1Q8NGV0 311 aa9.54□□□□□ -0.88
USP39-210ENST00000459775 SFXN5Q8TD22 340 aa9.54□□□□□ -0.88
USP39-210ENST00000459775 PYDC1Q8WXC3 89 aa9.54□□□□□ -0.88
USP39-210ENST00000459775 ASB9Q96DX5 294 aa9.54□□□□□ -0.88
USP39-210ENST00000459775 ARSGQ96EG1 525 aa9.54□□□□□ -0.88
USP39-210ENST00000459775 MS4A4EQ96PG1 132 aa9.54□□□□□ -0.88
USP39-210ENST00000459775 GAL3ST4Q96RP7 486 aa9.54□□□□□ -0.88
USP39-210ENST00000459775 ACTRT3Q9BYD9 372 aa9.54□□□□□ -0.88
USP39-210ENST00000459775 WDR54Q9H977 334 aa9.54□□□□□ -0.88
USP39-210ENST00000459775 FOLH1BQ9HBA9 442 aa9.54□□□□□ -0.88
USP39-210ENST00000459775 SUCOQ9UBS9 1254 aaKnown RBP9.54□□□□□ -0.88
USP39-210ENST00000459775 FARSAQ9Y285 508 aaKnown RBP9.54□□□□□ -0.88
USP39-210ENST00000459775 HEMK1Q9Y5R4 338 aaPredicted RBP9.54□□□□□ -0.88
USP39-210ENST00000459775 ZFYVE26Q68DK2 2539 aa9.54□□□□□ -0.88
USP39-210ENST00000459775 PCSK5Q92824 1860 aa9.53□□□□□ -0.88
USP39-210ENST00000459775 A0A087WV62 115 aa9.53□□□□□ -0.88
USP39-210ENST00000459775 CENPVL1A0A0U1RR11 272 aa9.53□□□□□ -0.88
USP39-210ENST00000459775 FAM220BPB1ANY3 271 aa9.53□□□□□ -0.88
USP39-210ENST00000459775 ZNF879B4DU55 563 aa9.53□□□□□ -0.88
USP39-210ENST00000459775 SLC28A2O43868 658 aa9.53□□□□□ -0.88
USP39-210ENST00000459775 SERPINB7O75635 380 aa9.53□□□□□ -0.88
USP39-210ENST00000459775 BCAS2O75934 225 aaPredicted RBP9.53□□□□□ -0.88
USP39-210ENST00000459775 KRT36O76013 467 aa9.53□□□□□ -0.88
USP39-210ENST00000459775 CHRM4P08173 479 aa9.53□□□□□ -0.88
USP39-210ENST00000459775 GPR143P51810 404 aa9.53□□□□□ -0.88
USP39-210ENST00000459775 SLC37A1P57057 533 aa9.53□□□□□ -0.88
USP39-210ENST00000459775 MRPS22P82650 360 aaKnown RBP9.53□□□□□ -0.88
USP39-210ENST00000459775 CDK6Q00534 326 aa9.53□□□□□ -0.88
USP39-210ENST00000459775 PSG6Q00889 435 aa9.53□□□□□ -0.88
USP39-210ENST00000459775 DNASE1L3Q13609 305 aa9.53□□□□□ -0.88
USP39-210ENST00000459775 FAM209BQ5JX69 171 aa9.53□□□□□ -0.88
USP39-210ENST00000459775 TMEM205Q6UW68 189 aa9.53□□□□□ -0.88
USP39-210ENST00000459775 ENPP6Q6UWR7 440 aa9.53□□□□□ -0.88
USP39-210ENST00000459775 PTCHD4Q6ZW05 846 aa9.53□□□□□ -0.88
USP39-210ENST00000459775 NET1Q7Z628 596 aaPredicted RBP9.53□□□□□ -0.88
USP39-210ENST00000459775 C9orf40Q8IXQ3 194 aa9.53□□□□□ -0.88
USP39-210ENST00000459775 PRR22Q8IZ63 422 aa9.53□□□□□ -0.88
USP39-210ENST00000459775 IL22RA1Q8N6P7 574 aa9.53□□□□□ -0.88
USP39-210ENST00000459775 ZNF527Q8NB42 609 aa9.53□□□□□ -0.88
USP39-210ENST00000459775 NFAM1Q8NET5 270 aaPredicted RBP9.53□□□□□ -0.88
USP39-210ENST00000459775 GPR151Q8TDV0 419 aa9.53□□□□□ -0.88
USP39-210ENST00000459775 TMEM19Q96HH6 336 aa9.53□□□□□ -0.88
USP39-210ENST00000459775 FBXL20Q96IG2 436 aa9.53□□□□□ -0.88
USP39-210ENST00000459775 PRORYQ9H606 182 aa9.53□□□□□ -0.88
USP39-210ENST00000459775 MKLN1Q9UL63 735 aa9.53□□□□□ -0.88
USP39-210ENST00000459775 SNX13Q9Y5W8 968 aa9.53□□□□□ -0.88
USP39-210ENST00000459775 A6NLC8 198 aa9.53□□□□□ -0.88
USP39-210ENST00000459775 TERTO14746 1132 aaKnown RBP9.53□□□□□ -0.88
USP39-210ENST00000459775 RRP8O43159 456 aaKnown RBP9.53□□□□□ -0.88
USP39-210ENST00000459775 ZNF354AO60765 605 aaPredicted RBP9.53□□□□□ -0.88
USP39-210ENST00000459775 CREG1O75629 220 aa9.53□□□□□ -0.88
USP39-210ENST00000459775 IGKV1D-16P01601 117 aa9.53□□□□□ -0.88
USP39-210ENST00000459775 CT45A8P0DMV1 189 aa9.53□□□□□ -0.88
USP39-210ENST00000459775 CT45A9P0DMV2 189 aa9.53□□□□□ -0.88
USP39-210ENST00000459775 TNFRSF1BP20333 461 aa9.53□□□□□ -0.88
USP39-210ENST00000459775 PPIBP23284 216 aaKnown RBP9.53□□□□□ -0.88
USP39-210ENST00000459775 FOLR3P41439 243 aa9.53□□□□□ -0.88
USP39-210ENST00000459775 ACAA2P42765 397 aaKnown RBP9.53□□□□□ -0.88
USP39-210ENST00000459775 ACTR3P61158 418 aa9.53□□□□□ -0.88
USP39-210ENST00000459775 SCRN3Q0VDG4 424 aa9.53□□□□□ -0.88
USP39-210ENST00000459775 GPAT3Q53EU6 434 aa9.53□□□□□ -0.88
USP39-210ENST00000459775 CT45A2Q5DJT8 189 aa9.53□□□□□ -0.88
USP39-210ENST00000459775 PPP1R32Q7Z5V6 425 aa9.53□□□□□ -0.88
USP39-210ENST00000459775 PTRH1Q86Y79 214 aaKnown RBP9.53□□□□□ -0.88
USP39-210ENST00000459775 DEPDC4Q8N2C3 294 aa9.53□□□□□ -0.88
USP39-210ENST00000459775 APCDD1LQ8NCL9 501 aa9.53□□□□□ -0.88
USP39-210ENST00000459775 C11orf65Q8NCR3 313 aa9.53□□□□□ -0.88
USP39-210ENST00000459775 GALNT11Q8NCW6 608 aa9.53□□□□□ -0.88
USP39-210ENST00000459775 ADAMTS15Q8TE58 950 aa9.53□□□□□ -0.88
USP39-210ENST00000459775 RMND5BQ96G75 393 aaPredicted RBP9.53□□□□□ -0.88
USP39-210ENST00000459775 LRGUKQ96M69 825 aa9.53□□□□□ -0.88
USP39-210ENST00000459775 VSTM2LQ96N03 204 aa9.53□□□□□ -0.88
USP39-210ENST00000459775 ATP6V0BQ99437 205 aa9.53□□□□□ -0.88
USP39-210ENST00000459775 GIN1Q9NXP7 522 aa9.53□□□□□ -0.88
USP39-210ENST00000459775 NUP210LQ5VU65 1888 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 A0A087X0M5 115 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 A0A1B0GX30 115 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 PGPEP1LA6NFU8 196 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 TMEM229AB2RXF0 380 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 J3QKU1 62 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 SOCS6O14544 535 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 SSX5O60225 188 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 H6PDO95479 791 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 SERPINA1P01009 418 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 ARAFP10398 606 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 NR2F1P10589 423 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 CLUP10909 449 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 WT1P19544 449 aaPredicted RBP9.52□□□□□ -0.89
USP39-210ENST00000459775 IL11P20809 199 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 KHKP50053 298 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 CHRNEQ04844 493 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 FADDQ13158 208 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 PCOLCEQ15113 449 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 C6orf163Q5TEZ5 329 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 CDC73Q6P1J9 531 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms