RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 LINGO3P0C6S8 592 aa19.2■□□□□ 0.66
CPNE1-220ENST00000458038 SDC1P18827 310 aa19.2■□□□□ 0.66
CPNE1-220ENST00000458038 POU6F2P78424 691 aaPredicted RBP19.2■□□□□ 0.66
CPNE1-220ENST00000458038 ZNF385BQ569K4 471 aa19.2■□□□□ 0.66
CPNE1-220ENST00000458038 EXOSC6Q5RKV6 272 aaKnown RBP19.2■□□□□ 0.66
CPNE1-220ENST00000458038 CLEC6AQ6EIG7 209 aa19.2■□□□□ 0.66
CPNE1-220ENST00000458038 ANKRD26P1Q6NSI1 321 aa19.2■□□□□ 0.66
CPNE1-220ENST00000458038 Q6ZSR9 355 aa19.2■□□□□ 0.66
CPNE1-220ENST00000458038 CCDC63Q8NA47 563 aa19.2■□□□□ 0.66
CPNE1-220ENST00000458038 RNF128Q8TEB7 428 aa19.2■□□□□ 0.66
CPNE1-220ENST00000458038 HSD17B8Q92506 261 aa19.2■□□□□ 0.66
CPNE1-220ENST00000458038 AKAP1Q92667 903 aaKnown RBP eCLIP19.2■□□□□ 0.66
CPNE1-220ENST00000458038 TRMT61AQ96FX7 289 aaKnown RBP19.2■□□□□ 0.66
CPNE1-220ENST00000458038 SH3YL1Q96HL8 342 aaPredicted RBP19.2■□□□□ 0.66
CPNE1-220ENST00000458038 TSSK3Q96PN8 268 aa19.2■□□□□ 0.66
CPNE1-220ENST00000458038 ACTL7BQ9Y614 415 aa19.2■□□□□ 0.66
CPNE1-220ENST00000458038 DNHD1Q96M86 4753 aa19.2■□□□□ 0.66
CPNE1-220ENST00000458038 CHD3Q12873 2000 aaKnown RBP19.2■□□□□ 0.66
CPNE1-220ENST00000458038 KIAA1324LA8MWY0 1029 aaPredicted RBP19.19■□□□□ 0.66
CPNE1-220ENST00000458038 H3BNH8 94 aa19.19■□□□□ 0.66
CPNE1-220ENST00000458038 KIF2AO00139 706 aaPredicted RBP19.19■□□□□ 0.66
CPNE1-220ENST00000458038 RPL3P39023 403 aaKnown RBP19.19■□□□□ 0.66
CPNE1-220ENST00000458038 SUMO3P55854 103 aaPredicted RBP19.19■□□□□ 0.66
CPNE1-220ENST00000458038 RPS4XP62701 263 aaKnown RBP19.19■□□□□ 0.66
CPNE1-220ENST00000458038 ZNF239Q16600 458 aaKnown RBP19.19■□□□□ 0.66
CPNE1-220ENST00000458038 ZAR1Q86SH2 424 aa19.19■□□□□ 0.66
CPNE1-220ENST00000458038 SLC43A2Q8N370 569 aa19.19■□□□□ 0.66
CPNE1-220ENST00000458038 CEP112Q8N8E3 955 aa19.19■□□□□ 0.66
CPNE1-220ENST00000458038 POC1BQ8TC44 478 aa19.19■□□□□ 0.66
CPNE1-220ENST00000458038 NPAS1Q99742 590 aa19.19■□□□□ 0.66
CPNE1-220ENST00000458038 ESRP2Q9H6T0 727 aaKnown RBP19.19■□□□□ 0.66
CPNE1-220ENST00000458038 C12orf49Q9H741 205 aa19.19■□□□□ 0.66
CPNE1-220ENST00000458038 TMEM185BQ9H7F4 350 aa19.19■□□□□ 0.66
CPNE1-220ENST00000458038 RNF115Q9Y4L5 304 aa19.19■□□□□ 0.66
CPNE1-220ENST00000458038 GPC6Q9Y625 555 aaPredicted RBP19.19■□□□□ 0.66
CPNE1-220ENST00000458038 COPEO14579 308 aa19.18■□□□□ 0.66
CPNE1-220ENST00000458038 GCM2O75603 506 aaPredicted RBP19.18■□□□□ 0.66
CPNE1-220ENST00000458038 PRKD3O94806 890 aa19.18■□□□□ 0.66
CPNE1-220ENST00000458038 FESP07332 822 aa19.18■□□□□ 0.66
CPNE1-220ENST00000458038 NID1P14543 1247 aa19.18■□□□□ 0.66
CPNE1-220ENST00000458038 ATP6V1C1P21283 382 aa19.18■□□□□ 0.66
CPNE1-220ENST00000458038 P2RY6Q15077 328 aa19.18■□□□□ 0.66
CPNE1-220ENST00000458038 RFTN2Q52LD8 501 aaPredicted RBP19.18■□□□□ 0.66
CPNE1-220ENST00000458038 SFRP5Q5T4F7 317 aa19.18■□□□□ 0.66
CPNE1-220ENST00000458038 GABRG1Q8N1C3 465 aa19.18■□□□□ 0.66
CPNE1-220ENST00000458038 NATD1Q8N6N6 113 aa19.18■□□□□ 0.66
CPNE1-220ENST00000458038 LRRN4CLQ8ND94 238 aa19.18■□□□□ 0.66
CPNE1-220ENST00000458038 FBXO30Q8TB52 745 aa19.18■□□□□ 0.66
CPNE1-220ENST00000458038 FBXW5Q969U6 566 aa19.18■□□□□ 0.66
CPNE1-220ENST00000458038 FAM120BQ96EK7 910 aaKnown RBP19.18■□□□□ 0.66
CPNE1-220ENST00000458038 C16orf58Q96GQ5 468 aa19.18■□□□□ 0.66
CPNE1-220ENST00000458038 PIGUQ9H490 435 aa19.18■□□□□ 0.66
CPNE1-220ENST00000458038 L2HGDHQ9H9P8 463 aa19.18■□□□□ 0.66
CPNE1-220ENST00000458038 FBXO34Q9NWN3 711 aa19.18■□□□□ 0.66
CPNE1-220ENST00000458038 KLHL13Q9P2N7 655 aa19.18■□□□□ 0.66
CPNE1-220ENST00000458038 BAIAP2L1Q9UHR4 511 aa19.18■□□□□ 0.66
CPNE1-220ENST00000458038 LAMP3Q9UQV4 416 aa19.18■□□□□ 0.66
CPNE1-220ENST00000458038 MXRA5Q9NR99 2828 aa19.17■□□□□ 0.66
CPNE1-220ENST00000458038 TMEM114B3SHH9 223 aa19.17■□□□□ 0.66
CPNE1-220ENST00000458038 OVOL3O00110 214 aa19.17■□□□□ 0.66
CPNE1-220ENST00000458038 LSM1O15116 133 aaKnown RBP19.17■□□□□ 0.66
CPNE1-220ENST00000458038 HMGN2P05204 90 aaKnown RBP19.17■□□□□ 0.66
CPNE1-220ENST00000458038 CD3EP07766 207 aa19.17■□□□□ 0.66
CPNE1-220ENST00000458038 YES1P07947 543 aa19.17■□□□□ 0.66
CPNE1-220ENST00000458038 KRT16P08779 473 aa19.17■□□□□ 0.66
CPNE1-220ENST00000458038 FAM153BP0C7A2 387 aa19.17■□□□□ 0.66
CPNE1-220ENST00000458038 IL32P24001 234 aa19.17■□□□□ 0.66
CPNE1-220ENST00000458038 SFTPDP35247 375 aa19.17■□□□□ 0.66
CPNE1-220ENST00000458038 IDUAP35475 653 aa19.17■□□□□ 0.66
CPNE1-220ENST00000458038 P2RX1P51575 399 aa19.17■□□□□ 0.66
CPNE1-220ENST00000458038 RPL38P63173 70 aaKnown RBP19.17■□□□□ 0.66
CPNE1-220ENST00000458038 TNK1Q13470 666 aa19.17■□□□□ 0.66
CPNE1-220ENST00000458038 CD226Q15762 336 aa19.17■□□□□ 0.66
CPNE1-220ENST00000458038 FAM153CQ494X1 144 aa19.17■□□□□ 0.66
CPNE1-220ENST00000458038 NCMAPQ5T1S8 102 aa19.17■□□□□ 0.66
CPNE1-220ENST00000458038 TFAP2EQ6VUC0 442 aa19.17■□□□□ 0.66
CPNE1-220ENST00000458038 DNAJC14Q6Y2X3 702 aaPredicted RBP19.17■□□□□ 0.66
CPNE1-220ENST00000458038 SSX8Q7RTT4 187 aa19.17■□□□□ 0.66
CPNE1-220ENST00000458038 TDRPQ86YL5 185 aa19.17■□□□□ 0.66
CPNE1-220ENST00000458038 OR2T11Q8NH01 316 aa19.17■□□□□ 0.66
CPNE1-220ENST00000458038 SPATA3Q8NHX4 192 aa19.17■□□□□ 0.66
CPNE1-220ENST00000458038 PHOSPHO1Q8TCT1 267 aa19.17■□□□□ 0.66
CPNE1-220ENST00000458038 ROBO4Q8WZ75 1007 aa19.17■□□□□ 0.66
CPNE1-220ENST00000458038 JADE3Q92613 823 aa19.17■□□□□ 0.66
CPNE1-220ENST00000458038 S100PBPQ96BU1 408 aa19.17■□□□□ 0.66
CPNE1-220ENST00000458038 MDFIQ99750 246 aa19.17■□□□□ 0.66
CPNE1-220ENST00000458038 ZCCHC3Q9NUD5 404 aaKnown RBP19.17■□□□□ 0.66
CPNE1-220ENST00000458038 ATP6V1HQ9UI12 483 aa19.17■□□□□ 0.66
CPNE1-220ENST00000458038 PTGDR2Q9Y5Y4 395 aa19.17■□□□□ 0.66
CPNE1-220ENST00000458038 ZNF195O14628 629 aa19.16■□□□□ 0.66
CPNE1-220ENST00000458038 NUDT14O95848 222 aa19.16■□□□□ 0.66
CPNE1-220ENST00000458038 FGF4P08620 206 aa19.16■□□□□ 0.66
CPNE1-220ENST00000458038 LINC00032P0C843 101 aa19.16■□□□□ 0.66
CPNE1-220ENST00000458038 BCKDHAP12694 445 aa19.16■□□□□ 0.66
CPNE1-220ENST00000458038 MAPK1P28482 360 aa19.16■□□□□ 0.66
CPNE1-220ENST00000458038 HPCAL1P37235 193 aa19.16■□□□□ 0.66
CPNE1-220ENST00000458038 ZNF117Q03924 483 aa19.16■□□□□ 0.66
CPNE1-220ENST00000458038 ZNF844Q08AG5 666 aa19.16■□□□□ 0.66
CPNE1-220ENST00000458038 CAPRIN1Q14444 709 aaKnown RBP19.16■□□□□ 0.66
CPNE1-220ENST00000458038 KLHL26Q53HC5 615 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms