RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 ENTPD8Q5MY95 495 aa18.49■□□□□ 0.55
SNX27-204ENST00000458013 MANEALQ5VSG8 457 aa18.49■□□□□ 0.55
SNX27-204ENST00000458013 TMEM239Q8WW34 195 aa18.49■□□□□ 0.55
SNX27-204ENST00000458013 C3orf30Q96M34 536 aa18.49■□□□□ 0.55
SNX27-204ENST00000458013 SFXN2Q96NB2 322 aa18.49■□□□□ 0.55
SNX27-204ENST00000458013 APOOQ9BUR5 198 aa18.49■□□□□ 0.55
SNX27-204ENST00000458013 PCDHA9Q9Y5H5 950 aa18.49■□□□□ 0.55
SNX27-204ENST00000458013 BCAS1O75363 584 aaPredicted RBP18.49■□□□□ 0.55
SNX27-204ENST00000458013 SNRNP70P08621 437 aaKnown RBP18.49■□□□□ 0.55
SNX27-204ENST00000458013 NKX6-1P78426 367 aaPredicted RBP18.49■□□□□ 0.55
SNX27-204ENST00000458013 SFRP5Q5T4F7 317 aa18.49■□□□□ 0.55
SNX27-204ENST00000458013 CRB3Q9BUF7 120 aa18.49■□□□□ 0.55
SNX27-204ENST00000458013 CD300AQ9UGN4 299 aa18.49■□□□□ 0.55
SNX27-204ENST00000458013 H0Y8G0 127 aa18.49■□□□□ 0.55
SNX27-204ENST00000458013 ACOT7O00154 380 aa18.49■□□□□ 0.55
SNX27-204ENST00000458013 HOXB5P09067 269 aa18.49■□□□□ 0.55
SNX27-204ENST00000458013 HOXA11P31270 313 aaPredicted RBP18.49■□□□□ 0.55
SNX27-204ENST00000458013 ERVK-16P61578 105 aa18.49■□□□□ 0.55
SNX27-204ENST00000458013 RLN3Q8WXF3 142 aa18.49■□□□□ 0.55
SNX27-204ENST00000458013 E7ESA3 106 aa18.49■□□□□ 0.55
SNX27-204ENST00000458013 AAK1Q2M2I8 961 aa18.49■□□□□ 0.55
SNX27-204ENST00000458013 FOXJ1Q92949 421 aa18.49■□□□□ 0.55
SNX27-204ENST00000458013 MRPL38Q96DV4 380 aaKnown RBP18.49■□□□□ 0.55
SNX27-204ENST00000458013 IL23AQ9NPF7 189 aa18.49■□□□□ 0.55
SNX27-204ENST00000458013 MEPEQ9NQ76 525 aaPredicted RBP18.49■□□□□ 0.55
SNX27-204ENST00000458013 PTGESO14684 152 aa18.49■□□□□ 0.55
SNX27-204ENST00000458013 F13BP05160 661 aa18.49■□□□□ 0.55
SNX27-204ENST00000458013 GIFP27352 417 aa18.49■□□□□ 0.55
SNX27-204ENST00000458013 FOLR3P41439 243 aa18.49■□□□□ 0.55
SNX27-204ENST00000458013 RHBDD1Q8TEB9 315 aa18.49■□□□□ 0.55
SNX27-204ENST00000458013 SAP130Q9H0E3 1048 aa18.49■□□□□ 0.55
SNX27-204ENST00000458013 QRSL1Q9H0R6 528 aaKnown RBP18.49■□□□□ 0.55
SNX27-204ENST00000458013 INTS6Q9UL03 887 aaKnown RBP18.49■□□□□ 0.55
SNX27-204ENST00000458013 ENPP4Q9Y6X5 453 aa18.49■□□□□ 0.55
SNX27-204ENST00000458013 SMLR1H3BR10 107 aa18.48■□□□□ 0.55
SNX27-204ENST00000458013 CHRM4P08173 479 aa18.48■□□□□ 0.55
SNX27-204ENST00000458013 RABIFP47224 123 aa18.48■□□□□ 0.55
SNX27-204ENST00000458013 SGPP2Q8IWX5 399 aa18.48■□□□□ 0.55
SNX27-204ENST00000458013 VWA5B2Q8N398 1253 aa18.48■□□□□ 0.55
SNX27-204ENST00000458013 OR14A2Q96R54 314 aa18.48■□□□□ 0.55
SNX27-204ENST00000458013 IL26Q9NPH9 171 aa18.48■□□□□ 0.55
SNX27-204ENST00000458013 ZCWPW2A0A1B0GU75 182 aa18.48■□□□□ 0.55
SNX27-204ENST00000458013 JRKO75564 520 aa18.48■□□□□ 0.55
SNX27-204ENST00000458013 IRF4Q15306 451 aa18.48■□□□□ 0.55
SNX27-204ENST00000458013 NKAIN2Q5VXU1 208 aa18.48■□□□□ 0.55
SNX27-204ENST00000458013 ABHD12BQ7Z5M8 362 aaPredicted RBP18.48■□□□□ 0.55
SNX27-204ENST00000458013 ACPTQ9BZG2 426 aa18.48■□□□□ 0.55
SNX27-204ENST00000458013 PLEK2Q9NYT0 353 aa18.48■□□□□ 0.55
SNX27-204ENST00000458013 PRKYO43930 277 aa18.48■□□□□ 0.55
SNX27-204ENST00000458013 PRKRAO75569 313 aaKnown RBP18.48■□□□□ 0.55
SNX27-204ENST00000458013 DSC1Q08554 894 aa18.48■□□□□ 0.55
SNX27-204ENST00000458013 CDKN3Q16667 212 aa18.48■□□□□ 0.55
SNX27-204ENST00000458013 FAM57BQ71RH2 274 aa18.48■□□□□ 0.55
SNX27-204ENST00000458013 ZNF610Q8N9Z0 462 aa18.48■□□□□ 0.55
SNX27-204ENST00000458013 NT5C3BQ969T7 300 aa18.48■□□□□ 0.55
SNX27-204ENST00000458013 FOLH1BQ9HBA9 442 aa18.48■□□□□ 0.55
SNX27-204ENST00000458013 TMEM181Q9P2C4 612 aa18.48■□□□□ 0.55
SNX27-204ENST00000458013 FUOMA2VDF0 154 aa18.48■□□□□ 0.55
SNX27-204ENST00000458013 PABPC4LP0CB38 370 aaKnown RBP18.48■□□□□ 0.55
SNX27-204ENST00000458013 MC2RQ01718 297 aa18.48■□□□□ 0.55
SNX27-204ENST00000458013 ACSM3Q53FZ2 586 aa18.48■□□□□ 0.55
SNX27-204ENST00000458013 DPY19L2P1Q6NXN4 242 aa18.48■□□□□ 0.55
SNX27-204ENST00000458013 TSPYL5Q86VY4 417 aaPredicted RBP18.48■□□□□ 0.55
SNX27-204ENST00000458013 MCATQ8IVS2 390 aaKnown RBP18.48■□□□□ 0.55
SNX27-204ENST00000458013 ZNF440Q8IYI8 595 aa18.48■□□□□ 0.55
SNX27-204ENST00000458013 DNAJC5GQ8N7S2 189 aa18.48■□□□□ 0.55
SNX27-204ENST00000458013 SFXN5Q8TD22 340 aa18.48■□□□□ 0.55
SNX27-204ENST00000458013 BORCS7Q96B45 105 aa18.48■□□□□ 0.55
SNX27-204ENST00000458013 SLC12A9Q9BXP2 914 aa18.48■□□□□ 0.55
SNX27-204ENST00000458013 DZANK1Q9NVP4 752 aa18.48■□□□□ 0.55
SNX27-204ENST00000458013 ZNF443Q9Y2A4 671 aaPredicted RBP18.48■□□□□ 0.55
SNX27-204ENST00000458013 PTAFRP25105 342 aa18.48■□□□□ 0.55
SNX27-204ENST00000458013 CHATP28329 748 aa18.48■□□□□ 0.55
SNX27-204ENST00000458013 RING1Q06587 406 aa18.48■□□□□ 0.55
SNX27-204ENST00000458013 SERINC5Q86VE9 423 aa18.48■□□□□ 0.55
SNX27-204ENST00000458013 ZNF808Q8N4W9 903 aaPredicted RBP18.48■□□□□ 0.55
SNX27-204ENST00000458013 ZNF845Q96IR2 970 aaPredicted RBP18.48■□□□□ 0.55
SNX27-204ENST00000458013 NALCNQ8IZF0 1738 aa18.47■□□□□ 0.55
SNX27-204ENST00000458013 G3V3Y1 287 aa18.47■□□□□ 0.55
SNX27-204ENST00000458013 SULT2B1O00204 365 aa18.47■□□□□ 0.55
SNX27-204ENST00000458013 CBX7O95931 251 aa18.47■□□□□ 0.55
SNX27-204ENST00000458013 GAAP10253 952 aa18.47■□□□□ 0.55
SNX27-204ENST00000458013 TIMP2P16035 220 aa18.47■□□□□ 0.55
SNX27-204ENST00000458013 POU3F2P20265 443 aaPredicted RBP18.47■□□□□ 0.55
SNX27-204ENST00000458013 MSR1P21757 451 aa18.47■□□□□ 0.55
SNX27-204ENST00000458013 HRH2P25021 359 aa18.47■□□□□ 0.55
SNX27-204ENST00000458013 GCH1P30793 250 aa18.47■□□□□ 0.55
SNX27-204ENST00000458013 LSAMPQ13449 338 aa18.47■□□□□ 0.55
SNX27-204ENST00000458013 LEXMQ3ZCV2 418 aa18.47■□□□□ 0.55
SNX27-204ENST00000458013 HEPHL1Q6MZM0 1159 aa18.47■□□□□ 0.55
SNX27-204ENST00000458013 COX15Q7KZN9 410 aa18.47■□□□□ 0.55
SNX27-204ENST00000458013 CCDC71Q8IV32 467 aaPredicted RBP18.47■□□□□ 0.55
SNX27-204ENST00000458013 TINAGL1Q9GZM7 467 aaPredicted RBP18.47■□□□□ 0.55
SNX27-204ENST00000458013 TSPAN10Q9H1Z9 355 aaPredicted RBP18.47■□□□□ 0.55
SNX27-204ENST00000458013 LMAN1LQ9HAT1 526 aa18.47■□□□□ 0.55
SNX27-204ENST00000458013 VAPAQ9P0L0 249 aa18.47■□□□□ 0.55
SNX27-204ENST00000458013 CD207Q9UJ71 328 aa18.47■□□□□ 0.55
SNX27-204ENST00000458013 IL32P24001 234 aa18.47■□□□□ 0.55
SNX27-204ENST00000458013 MAMDC4Q6UXC1 1216 aa18.47■□□□□ 0.55
SNX27-204ENST00000458013 CCDC71LQ8N9Z2 235 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms