RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 BCAS1O75363 584 aaPredicted RBP4.94□□□□□ -1.62
CSMD3-204ENST00000455883 PTHLHP12272 177 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 GDPD4Q6W3E5 623 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 IRF2BP1Q8IU81 584 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 FIBCD1Q8N539 461 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 MTHFD2LQ9H903 347 aaPredicted RBP4.94□□□□□ -1.62
CSMD3-204ENST00000455883 BCO1Q9HAY6 547 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 GALNT9Q9HCQ5 603 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 MSRAQ9UJ68 235 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 ACTL6BO94805 426 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 C4BPAP04003 597 aaKnown RBP4.94□□□□□ -1.62
CSMD3-204ENST00000455883 HIST1H1TP22492 207 aaPredicted RBP4.94□□□□□ -1.62
CSMD3-204ENST00000455883 ZNF91Q05481 1191 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 DYRK1AQ13627 763 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 LRRC32Q14392 662 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 NOXRED1Q6NXP6 359 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 ZNF561Q8N587 486 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 OR13D1Q8NGV5 346 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 TTC9Q92623 222 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 DDIT4LQ96D03 193 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 TLR9Q9NR96 1032 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 KCNS2Q9ULS6 477 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 SRPK3Q9UPE1 567 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 PCDHA9Q9Y5H5 950 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 TSPAN11A1L157 253 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 F5H423 210 aaPredicted RBP4.94□□□□□ -1.62
CSMD3-204ENST00000455883 H3BMQ9 156 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 ITGB2P05107 769 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 SPATA31C1P0DKV0 1188 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 GRPRP30550 384 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 RPS3AP61247 264 aaKnown RBP4.94□□□□□ -1.62
CSMD3-204ENST00000455883 ALG1LQ6GMV1 187 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 TPRG1Q6ZUI0 275 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 KLBQ86Z14 1044 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 NAXDQ8IW45 347 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 CELF5Q8N6W0 485 aaKnown RBP4.94□□□□□ -1.62
CSMD3-204ENST00000455883 OR13F1Q8NGS4 319 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 TMEM18Q96B42 140 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 QTRT2Q9H974 415 aaKnown RBP4.94□□□□□ -1.62
CSMD3-204ENST00000455883 UBE2J1Q9Y385 318 aaPredicted RBP4.94□□□□□ -1.62
CSMD3-204ENST00000455883 SIGLEC1Q9BZZ2 1709 aa4.94□□□□□ -1.62
CSMD3-204ENST00000455883 KRBA1A5PL33 1030 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 H3BSA7 217 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 I6L893 689 aaPredicted RBP4.93□□□□□ -1.62
CSMD3-204ENST00000455883 HPGDSO60760 199 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 CR2P20023 1033 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 RAB28P51157 221 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 POU6F2P78424 691 aaPredicted RBP4.93□□□□□ -1.62
CSMD3-204ENST00000455883 FCN2Q15485 313 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 PM20D1Q6GTS8 502 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 LSRQ86X29 649 aaPredicted RBP4.93□□□□□ -1.62
CSMD3-204ENST00000455883 PELI2Q9HAT8 420 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 IL17RBQ9NRM6 502 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 MED9Q9NWA0 146 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 LHX6Q9UPM6 363 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 LRRK2Q5S007 2527 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 TTC24A2A3L6 582 aaPredicted RBP4.93□□□□□ -1.62
CSMD3-204ENST00000455883 YDJCA8MPS7 323 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 K7EPK0 472 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 ECI2O75521 394 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 ALX3O95076 343 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 RHOP08100 348 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 RPL17P18621 184 aaKnown RBP4.93□□□□□ -1.62
CSMD3-204ENST00000455883 CA5AP35218 305 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 AKR1C2P52895 323 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 LIMK1P53667 647 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 SCARF1Q14162 830 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 SEZ6Q53EL9 994 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 TIGD5Q53EQ6 642 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 PPP1R26Q5T8A7 1209 aaPredicted RBP4.93□□□□□ -1.62
CSMD3-204ENST00000455883 ERN2Q76MJ5 926 aaKnown RBP4.93□□□□□ -1.62
CSMD3-204ENST00000455883 GKN2Q86XP6 184 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 FAM71E2Q8N5Q1 922 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 OR13C3Q8NGS6 347 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 OR8K3Q8NH51 312 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 OR52J3Q8NH60 311 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 SCARB1Q8WTV0 552 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 MARVELD3Q96A59 401 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 SLC25A36Q96CQ1 311 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 CELF6Q96J87 481 aaKnown RBP4.93□□□□□ -1.62
CSMD3-204ENST00000455883 TXNDC17Q9BRA2 123 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 DUSP22Q9NRW4 184 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 CPQQ9Y646 472 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 TGFB1I1O43294 461 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 NDUFB2O95178 105 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 GOT2P00505 430 aaKnown RBP4.93□□□□□ -1.62
CSMD3-204ENST00000455883 LCKP06239 509 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 MMP15P51511 669 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 ADPRHP54922 357 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 FPGSQ05932 587 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 FUT2Q10981 343 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 EIF2B1Q14232 305 aaKnown RBP4.93□□□□□ -1.62
CSMD3-204ENST00000455883 LIPKQ5VXJ0 399 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 ZDHHC24Q6UX98 284 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 GALNT5Q7Z7M9 940 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 ZNF619Q8N2I2 560 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 PLA2G15Q8NCC3 412 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 DBF4BQ8NFT6 615 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 OR52N1Q8NH53 320 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 ZNF689Q96CS4 500 aaPredicted RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms