RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 C1orf220Q5T0J3 134 aa3.79□□□□□ -1.8
LINC00393-202ENST00000452852 ZNF658Q5TYW1 1059 aaPredicted RBP3.79□□□□□ -1.8
LINC00393-202ENST00000452852 LIPJQ5W064 366 aa3.79□□□□□ -1.8
LINC00393-202ENST00000452852 BSPRYQ5W0U4 402 aa3.79□□□□□ -1.8
LINC00393-202ENST00000452852 ARHGAP17Q68EM7 881 aa3.79□□□□□ -1.8
LINC00393-202ENST00000452852 TMEM207Q6UWW9 146 aa3.79□□□□□ -1.8
LINC00393-202ENST00000452852 CEACAM20Q6UY09 585 aa3.79□□□□□ -1.8
LINC00393-202ENST00000452852 SCD5Q86SK9 330 aa3.79□□□□□ -1.8
LINC00393-202ENST00000452852 YRDCQ86U90 279 aaKnown RBP3.79□□□□□ -1.8
LINC00393-202ENST00000452852 BCORP1Q8N888 145 aa3.79□□□□□ -1.8
LINC00393-202ENST00000452852 TCEANCQ8N8B7 351 aa3.79□□□□□ -1.8
LINC00393-202ENST00000452852 SLC37A3Q8NCC5 494 aa3.79□□□□□ -1.8
LINC00393-202ENST00000452852 ADAD2Q8NCV1 583 aaKnown RBP3.79□□□□□ -1.8
LINC00393-202ENST00000452852 OR2T3Q8NH03 318 aa3.79□□□□□ -1.8
LINC00393-202ENST00000452852 UBA3Q8TBC4 463 aa3.79□□□□□ -1.8
LINC00393-202ENST00000452852 PHYHIPQ92561 330 aa3.79□□□□□ -1.8
LINC00393-202ENST00000452852 TMA16Q96EY4 203 aaKnown RBP3.79□□□□□ -1.8
LINC00393-202ENST00000452852 SSX3Q99909 188 aa3.79□□□□□ -1.8
LINC00393-202ENST00000452852 AGPAT1Q99943 283 aa3.79□□□□□ -1.8
LINC00393-202ENST00000452852 TRIM62Q9BVG3 475 aa3.79□□□□□ -1.8
LINC00393-202ENST00000452852 ULBP1Q9BZM6 244 aa3.79□□□□□ -1.8
LINC00393-202ENST00000452852 NMNAT2Q9BZQ4 307 aa3.79□□□□□ -1.8
LINC00393-202ENST00000452852 LHX5Q9H2C1 402 aa3.79□□□□□ -1.8
LINC00393-202ENST00000452852 SLC52A3Q9NQ40 469 aa3.79□□□□□ -1.8
LINC00393-202ENST00000452852 ABCC13Q9NSE7 274 aa3.79□□□□□ -1.8
LINC00393-202ENST00000452852 PLEK2Q9NYT0 353 aa3.79□□□□□ -1.8
LINC00393-202ENST00000452852 HACD3Q9P035 362 aa3.79□□□□□ -1.8
LINC00393-202ENST00000452852 THAP10Q9P2Z0 257 aaPredicted RBP3.79□□□□□ -1.8
LINC00393-202ENST00000452852 ATXN10Q9UBB4 475 aa3.79□□□□□ -1.8
LINC00393-202ENST00000452852 SUN2Q9UH99 717 aa3.79□□□□□ -1.8
LINC00393-202ENST00000452852 KCNG2Q9UJ96 466 aa3.79□□□□□ -1.8
LINC00393-202ENST00000452852 MRTO4Q9UKD2 239 aaKnown RBP3.79□□□□□ -1.8
LINC00393-202ENST00000452852 KLK13Q9UKR3 277 aa3.79□□□□□ -1.8
LINC00393-202ENST00000452852 SNX6Q9UNH7 406 aa3.79□□□□□ -1.8
LINC00393-202ENST00000452852 PPP2R2CQ9Y2T4 447 aa3.79□□□□□ -1.8
LINC00393-202ENST00000452852 MRPS2Q9Y399 296 aaKnown RBP3.79□□□□□ -1.8
LINC00393-202ENST00000452852 CELSR3Q9NYQ7 3312 aa3.79□□□□□ -1.8
LINC00393-202ENST00000452852 LAMA5O15230 3695 aa3.79□□□□□ -1.8
LINC00393-202ENST00000452852 ZZEF1O43149 2961 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 MYLKQ15746 1914 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 PLXNB3Q9ULL4 1909 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 FAM47DPA6NHR8 397 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 PCNX2A6NKB5 2137 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 C16orf97H3BN30 126 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 EPHB6O15197 1021 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 MED7O43513 233 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 TLX2O43763 284 aaPredicted RBP3.78□□□□□ -1.8
LINC00393-202ENST00000452852 GMFGO60234 142 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 DFNA5O60443 496 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 TBL1XO60907 577 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 SAP30O75446 220 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 DFFBO76075 338 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 SNX4O95219 450 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 FGFR1OPO95684 399 aaKnown RBP3.78□□□□□ -1.8
LINC00393-202ENST00000452852 GNA14O95837 355 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 TSHBP01222 138 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 IGLV3-19P01714 112 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 APOEP02649 317 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 TPM2P07951 284 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 PAEPP09466 180 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 ZNF883P0CG24 379 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 CALCBP10092 127 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 HLA-EP13747 358 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 LIFP15018 202 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 ACKR3P25106 362 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 PTPN4P29074 926 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 CEACAM8P31997 349 aaPredicted RBP3.78□□□□□ -1.8
LINC00393-202ENST00000452852 HOXA1P49639 335 aaPredicted RBP3.78□□□□□ -1.8
LINC00393-202ENST00000452852 GBX2P52951 348 aaPredicted RBP3.78□□□□□ -1.8
LINC00393-202ENST00000452852 C21orf59P57076 290 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 DAOAP59103 153 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 RPS14P62263 151 aaKnown RBP3.78□□□□□ -1.8
LINC00393-202ENST00000452852 POU3F1Q03052 451 aaPredicted RBP3.78□□□□□ -1.8
LINC00393-202ENST00000452852 HSF2Q03933 536 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 PNOCQ13519 176 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 SNX1Q13596 522 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 ENPP2Q13822 863 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 DUSP5Q16690 384 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 HLA-BQ31612 363 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 NADK2Q4G0N4 442 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 ZCWPW2Q504Y3 356 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 TRIM65Q6PJ69 517 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 LCLAT1Q6UWP7 414 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 GRAMD2AQ8IUY3 354 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 MISPQ8IVT2 679 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 KIRREL3Q8IZU9 778 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 CCDC197Q8NCU1 140 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 OR13A1Q8NGR1 328 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 OR4C3Q8NH37 302 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 SECTM1Q8WVN6 248 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 SMPDL3AQ92484 453 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 NDRG1Q92597 394 aaKnown RBP3.78□□□□□ -1.8
LINC00393-202ENST00000452852 DHTKD1Q96HY7 919 aaPredicted RBP3.78□□□□□ -1.8
LINC00393-202ENST00000452852 PIWIL1Q96J94 861 aaKnown RBP3.78□□□□□ -1.8
LINC00393-202ENST00000452852 ST6GAL2Q96JF0 529 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 SERPINB11Q96P15 392 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 IL17FQ96PD4 163 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 GSDMAQ96QA5 445 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 ERGIC2Q96RQ1 377 aa3.78□□□□□ -1.8
LINC00393-202ENST00000452852 OMDQ99983 421 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms