RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 MOB3BQ86TA1 216 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 FUNDC1Q8IVP5 155 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 MCOLN2Q8IZK6 566 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 TBC1D19Q8N5T2 526 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 CCNYL1Q8N7R7 359 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 SLC16A11Q8NCK7 471 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 ADAD2Q8NCV1 583 aaKnown RBP3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 RNF128Q8TEB7 428 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 RAD51AP1Q96B01 352 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 TMEM18Q96B42 140 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 BPIFA2Q96DR5 249 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 TMA16Q96EY4 203 aaKnown RBP3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 ZNF333Q96JL9 665 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 SERPINB11Q96P15 392 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 OPALINQ96PE5 141 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 CYP2S1Q96SQ9 504 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 MBOAT4Q96T53 435 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 AIFM2Q9BRQ8 373 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 DCUN1D5Q9BTE7 237 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 MAP1LC3CQ9BXW4 147 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 FAM49AQ9H0Q0 323 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 NXF5Q9H1B4 397 aaKnown RBP3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 OR51B6Q9H340 312 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 C1orf198Q9H425 327 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 ANKRD19PQ9H560 264 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 INPP5EQ9NRR6 644 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 C2orf42Q9NWW7 574 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 RNF186Q9NXI6 227 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 NUP50Q9UKX7 468 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 RAB23Q9ULC3 237 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 TSSC4Q9Y5U2 329 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 PEX16Q9Y5Y5 336 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 HS3ST3A1Q9Y663 406 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 V9GYQ6 96 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 A0A1W2PRD5 423 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 TMEM213A2RRL7 107 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 VWC2LB2RUY7 222 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 E5RI56 91 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 NPIPA7E9PJI5 369 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 E9PQ18 207 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 NPIPB8E9PQR5 432 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 CCL24O00175 119 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 DVL1O14640 695 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 RRHO14718 337 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 CASKO14936 926 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 SLC19A2O60779 497 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 FCN3O75636 299 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 GPX5O75715 221 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 CIAO1O76071 339 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 DIRAS1O95057 198 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 PAPSS2O95340 614 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 BMP10O95393 424 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 BRI3O95415 125 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 TMEM50AO95807 157 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 NR3C1P04150 777 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 P04436 131 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 FABP1P07148 127 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 GSTA1P08263 222 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 CTXN2P0C2S0 81 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 NPIPA8P0DM63 369 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 KITLGP21583 273 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 G0S2P27469 103 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 TEAD1P28347 426 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 KDELR2P33947 212 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 CEACAM3P40198 252 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 RGRP47804 291 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 P2RY1P47900 373 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 PPP3CCP48454 512 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 PDX1P52945 283 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 MRPS6P82932 125 aaKnown RBP3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 C1orf61Q13536 156 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 TFDP1Q14186 410 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 TRAM2Q15035 370 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 PTPRRQ15256 657 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 OR1C1Q15619 314 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 ALX1Q15699 326 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 EZH2Q15910 746 aaKnown RBP3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 DUOXA1Q1HG43 343 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 SNAI3Q3KNW1 292 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 PHLDA2Q53GA4 152 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 ENTPD8Q5MY95 495 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 ABHD17BQ5VST6 288 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 STUMQ69YW2 141 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 SLC27A4Q6P1M0 643 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 BHLHB9Q6PI77 547 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 UNQ6126/PRO20091Q6UXV3 157 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 RBM44Q6ZP01 1051 aaKnown RBP3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 NIPA1Q7RTP0 329 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 HDDC2Q7Z4H3 204 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 KCNMB4Q86W47 210 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 SLC13A5Q86YT5 568 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 GSPT2Q8IYD1 628 aaKnown RBP3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 CDK20Q8IZL9 346 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 SYS1Q8N2H4 156 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 LIX1Q8N485 282 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 ACVR1CQ8NER5 493 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 OR5D18Q8NGL1 313 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 OR13J1Q8NGT2 312 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 OR52E5Q8NH55 327 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 ZNF473Q8WTR7 871 aaKnown RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms