RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 NADKO95544 446 aaPredicted RBP9.92□□□□□ -0.82
PKP4-206ENST00000452162 C1QTNF9P0C862 333 aa9.92□□□□□ -0.82
PKP4-206ENST00000452162 DBTP11182 482 aaKnown RBP9.92□□□□□ -0.82
PKP4-206ENST00000452162 CCL4P13236 92 aa9.92□□□□□ -0.82
PKP4-206ENST00000452162 UGT2B10P36537 528 aa9.92□□□□□ -0.82
PKP4-206ENST00000452162 ZNF136P52737 540 aa9.92□□□□□ -0.82
PKP4-206ENST00000452162 EXOSC7Q15024 291 aaKnown RBP9.92□□□□□ -0.82
PKP4-206ENST00000452162 LARS2Q15031 903 aaKnown RBP9.92□□□□□ -0.82
PKP4-206ENST00000452162 MAPK14Q16539 360 aa9.92□□□□□ -0.82
PKP4-206ENST00000452162 EIPR1Q53HC9 387 aa9.92□□□□□ -0.82
PKP4-206ENST00000452162 ARMCX4Q5H9R4 360 aa9.92□□□□□ -0.82
PKP4-206ENST00000452162 C19orf48Q6RUI8 117 aa9.92□□□□□ -0.82
PKP4-206ENST00000452162 ZNF730Q6ZMV8 503 aa9.92□□□□□ -0.82
PKP4-206ENST00000452162 GDF7Q7Z4P5 450 aa9.92□□□□□ -0.82
PKP4-206ENST00000452162 NKAIN4Q8IVV8 208 aa9.92□□□□□ -0.82
PKP4-206ENST00000452162 OR8D4Q8NGM9 314 aa9.92□□□□□ -0.82
PKP4-206ENST00000452162 WDR36Q8NI36 951 aaKnown RBP9.92□□□□□ -0.82
PKP4-206ENST00000452162 ACOT11Q8WXI4 607 aaPredicted RBP9.92□□□□□ -0.82
PKP4-206ENST00000452162 PLEKHA8Q96JA3 519 aa9.92□□□□□ -0.82
PKP4-206ENST00000452162 OR5M11Q96RB7 305 aa9.92□□□□□ -0.82
PKP4-206ENST00000452162 NRSN2Q9GZP1 204 aa9.92□□□□□ -0.82
PKP4-206ENST00000452162 SLIRPQ9GZT3 109 aaKnown RBP9.92□□□□□ -0.82
PKP4-206ENST00000452162 EGLN3Q9H6Z9 239 aa9.92□□□□□ -0.82
PKP4-206ENST00000452162 AKIP1Q9NQ31 210 aa9.92□□□□□ -0.82
PKP4-206ENST00000452162 OCIAD1Q9NX40 245 aa9.92□□□□□ -0.82
PKP4-206ENST00000452162 ZNF232Q9UNY5 417 aa9.92□□□□□ -0.82
PKP4-206ENST00000452162 LSM2Q9Y333 95 aaKnown RBP9.92□□□□□ -0.82
PKP4-206ENST00000452162 RPL36Q9Y3U8 105 aaKnown RBP9.92□□□□□ -0.82
PKP4-206ENST00000452162 SEC16AO15027 2179 aa9.92□□□□□ -0.82
PKP4-206ENST00000452162 J3QRK9 145 aa9.92□□□□□ -0.82
PKP4-206ENST00000452162 PLD2O14939 933 aa9.92□□□□□ -0.82
PKP4-206ENST00000452162 KLF4O43474 513 aa9.92□□□□□ -0.82
PKP4-206ENST00000452162 CHST10O43529 356 aa9.92□□□□□ -0.82
PKP4-206ENST00000452162 STX11O75558 287 aa9.92□□□□□ -0.82
PKP4-206ENST00000452162 ETV5P41161 510 aa9.92□□□□□ -0.82
PKP4-206ENST00000452162 RGS6P49758 472 aa9.92□□□□□ -0.82
PKP4-206ENST00000452162 SMSP52788 366 aa9.92□□□□□ -0.82
PKP4-206ENST00000452162 RTP5Q14D33 572 aa9.92□□□□□ -0.82
PKP4-206ENST00000452162 NCF4Q15080 339 aa9.92□□□□□ -0.82
PKP4-206ENST00000452162 SYT14P1Q58G82 188 aa9.92□□□□□ -0.82
PKP4-206ENST00000452162 RNLSQ5VYX0 342 aa9.92□□□□□ -0.82
PKP4-206ENST00000452162 DGAT2L6Q6ZPD8 337 aa9.92□□□□□ -0.82
PKP4-206ENST00000452162 RASSF6Q6ZTQ3 369 aa9.92□□□□□ -0.82
PKP4-206ENST00000452162 BCDIN3DQ7Z5W3 292 aaKnown RBP9.92□□□□□ -0.82
PKP4-206ENST00000452162 COX18Q8N8Q8 333 aa9.92□□□□□ -0.82
PKP4-206ENST00000452162 PIGXQ8TBF5 258 aa9.92□□□□□ -0.82
PKP4-206ENST00000452162 PIK3R3Q92569 461 aa9.92□□□□□ -0.82
PKP4-206ENST00000452162 ZHX1-C8orf76Q96EF9 292 aa9.92□□□□□ -0.82
PKP4-206ENST00000452162 SLC41A3Q96GZ6 507 aa9.92□□□□□ -0.82
PKP4-206ENST00000452162 CMKLR1Q99788 373 aa9.92□□□□□ -0.82
PKP4-206ENST00000452162 TSSK6Q9BXA6 273 aa9.92□□□□□ -0.82
PKP4-206ENST00000452162 DSN1Q9H410 356 aa9.92□□□□□ -0.82
PKP4-206ENST00000452162 CACYBPQ9HB71 228 aaKnown RBP9.92□□□□□ -0.82
PKP4-206ENST00000452162 FBXO8Q9NRD0 319 aa9.92□□□□□ -0.82
PKP4-206ENST00000452162 FBXO34Q9NWN3 711 aa9.92□□□□□ -0.82
PKP4-206ENST00000452162 CNIH4Q9P003 139 aa9.92□□□□□ -0.82
PKP4-206ENST00000452162 KCNE5Q9UJ90 142 aa9.92□□□□□ -0.82
PKP4-206ENST00000452162 ANKRD11Q6UB99 2663 aaPredicted RBP9.92□□□□□ -0.82
PKP4-206ENST00000452162 SCN2AQ99250 2005 aa9.91□□□□□ -0.82
PKP4-206ENST00000452162 TLX2O43763 284 aaPredicted RBP9.91□□□□□ -0.82
PKP4-206ENST00000452162 CBX7O95931 251 aa9.91□□□□□ -0.82
PKP4-206ENST00000452162 AK1P00568 194 aa9.91□□□□□ -0.82
PKP4-206ENST00000452162 DBIP07108 87 aaKnown RBP9.91□□□□□ -0.82
PKP4-206ENST00000452162 SLC35E2P0CK97 266 aa9.91□□□□□ -0.82
PKP4-206ENST00000452162 FPR3P25089 353 aa9.91□□□□□ -0.82
PKP4-206ENST00000452162 IFNA8P32881 189 aa9.91□□□□□ -0.82
PKP4-206ENST00000452162 CSTF2P33240 577 aaKnown RBP eCLIP9.91□□□□□ -0.829e-7■■■■□ 21.8
PKP4-206ENST00000452162 IDUAP35475 653 aa9.91□□□□□ -0.82
PKP4-206ENST00000452162 SERPINB10P48595 397 aa9.91□□□□□ -0.82
PKP4-206ENST00000452162 CLK1P49759 484 aaKnown RBP9.91□□□□□ -0.82
PKP4-206ENST00000452162 GPR68Q15743 365 aa9.91□□□□□ -0.82
PKP4-206ENST00000452162 PRSS42Q7Z5A4 293 aa9.91□□□□□ -0.82
PKP4-206ENST00000452162 POGLUT1Q8NBL1 392 aa9.91□□□□□ -0.82
PKP4-206ENST00000452162 AGBL5Q8NDL9 886 aa9.91□□□□□ -0.82
PKP4-206ENST00000452162 TOR1AIP2Q8NFQ8 470 aa9.91□□□□□ -0.82
PKP4-206ENST00000452162 TEX47Q8TBZ9 253 aa9.91□□□□□ -0.82
PKP4-206ENST00000452162 TMEM80Q96HE8 168 aa9.91□□□□□ -0.82
PKP4-206ENST00000452162 FAM46AQ96IP4 442 aaKnown RBP9.91□□□□□ -0.82
PKP4-206ENST00000452162 DCSTAMPQ9H295 470 aa9.91□□□□□ -0.82
PKP4-206ENST00000452162 ZBTB20Q9HC78 741 aaPredicted RBP9.91□□□□□ -0.82
PKP4-206ENST00000452162 PISDQ9UG56 409 aa9.91□□□□□ -0.82
PKP4-206ENST00000452162 SDK2Q58EX2 2172 aa9.91□□□□□ -0.82
PKP4-206ENST00000452162 A0A0A6YYC8 382 aaPredicted RBP9.9□□□□□ -0.82
PKP4-206ENST00000452162 GXYLT2A0PJZ3 443 aa9.9□□□□□ -0.82
PKP4-206ENST00000452162 TLCD2A6NGC4 264 aa9.9□□□□□ -0.82
PKP4-206ENST00000452162 CLDN25C9JDP6 229 aa9.9□□□□□ -0.82
PKP4-206ENST00000452162 TGFBR3LH3BV60 316 aa9.9□□□□□ -0.82
PKP4-206ENST00000452162 I3L1I5 382 aaPredicted RBP9.9□□□□□ -0.82
PKP4-206ENST00000452162 FOXS1O43638 330 aa9.9□□□□□ -0.82
PKP4-206ENST00000452162 BRINP1O60477 761 aa9.9□□□□□ -0.82
PKP4-206ENST00000452162 SRPX2O60687 465 aaPredicted RBP9.9□□□□□ -0.82
PKP4-206ENST00000452162 ANKRD34CP0C6C1 535 aa9.9□□□□□ -0.82
PKP4-206ENST00000452162 JMJD7P0C870 316 aa9.9□□□□□ -0.82
PKP4-206ENST00000452162 NID1P14543 1247 aa9.9□□□□□ -0.82
PKP4-206ENST00000452162 GABRA4P48169 554 aa9.9□□□□□ -0.82
PKP4-206ENST00000452162 TUBA1BP68363 451 aa9.9□□□□□ -0.82
PKP4-206ENST00000452162 RHAGQ02094 409 aa9.9□□□□□ -0.82
PKP4-206ENST00000452162 MAP4K2Q12851 820 aa9.9□□□□□ -0.82
PKP4-206ENST00000452162 EIF3IQ13347 325 aaKnown RBP9.9□□□□□ -0.82
PKP4-206ENST00000452162 UNQ6494/PRO21346Q6UXR6 183 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms