RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 MANFP55145 182 aaKnown RBP9.71□□□□□ -0.86
USP1-204ENST00000452143 SUMO3P55854 103 aaPredicted RBP9.71□□□□□ -0.86
USP1-204ENST00000452143 ZNF844Q08AG5 666 aa9.71□□□□□ -0.86
USP1-204ENST00000452143 MLC1Q15049 377 aa9.71□□□□□ -0.86
USP1-204ENST00000452143 DUSP5Q16690 384 aa9.71□□□□□ -0.86
USP1-204ENST00000452143 EXOSC6Q5RKV6 272 aaKnown RBP9.71□□□□□ -0.86
USP1-204ENST00000452143 TMEM201Q5SNT2 666 aa9.71□□□□□ -0.86
USP1-204ENST00000452143 ANKRD26P1Q6NSI1 321 aa9.71□□□□□ -0.86
USP1-204ENST00000452143 FIGNL1Q6PIW4 674 aa9.71□□□□□ -0.86
USP1-204ENST00000452143 TFAP2EQ6VUC0 442 aa9.71□□□□□ -0.86
USP1-204ENST00000452143 MTERF4Q7Z6M4 381 aaKnown RBP9.71□□□□□ -0.86
USP1-204ENST00000452143 IFT20Q8IY31 132 aa9.71□□□□□ -0.86
USP1-204ENST00000452143 LILRA2Q8N149 483 aa9.71□□□□□ -0.86
USP1-204ENST00000452143 GABRG1Q8N1C3 465 aa9.71□□□□□ -0.86
USP1-204ENST00000452143 COX18Q8N8Q8 333 aa9.71□□□□□ -0.86
USP1-204ENST00000452143 GATSQ8NAP1 163 aa9.71□□□□□ -0.86
USP1-204ENST00000452143 SLC16A11Q8NCK7 471 aa9.71□□□□□ -0.86
USP1-204ENST00000452143 LRRN4CLQ8ND94 238 aa9.71□□□□□ -0.86
USP1-204ENST00000452143 SPATA3Q8NHX4 192 aa9.71□□□□□ -0.86
USP1-204ENST00000452143 B4GALNT2Q8NHY0 566 aa9.71□□□□□ -0.86
USP1-204ENST00000452143 FBXO30Q8TB52 745 aa9.71□□□□□ -0.86
USP1-204ENST00000452143 AKAP1Q92667 903 aaKnown RBP eCLIP9.71□□□□□ -0.86
USP1-204ENST00000452143 FBXW5Q969U6 566 aa9.71□□□□□ -0.86
USP1-204ENST00000452143 S100PBPQ96BU1 408 aa9.71□□□□□ -0.86
USP1-204ENST00000452143 TRMT61AQ96FX7 289 aaKnown RBP9.71□□□□□ -0.86
USP1-204ENST00000452143 SH3YL1Q96HL8 342 aaPredicted RBP9.71□□□□□ -0.86
USP1-204ENST00000452143 STACQ99469 402 aa9.71□□□□□ -0.86
USP1-204ENST00000452143 NPAS1Q99742 590 aa9.71□□□□□ -0.86
USP1-204ENST00000452143 POTEKPQ9BYX7 375 aa9.71□□□□□ -0.86
USP1-204ENST00000452143 ESRP2Q9H6T0 727 aaKnown RBP9.71□□□□□ -0.86
USP1-204ENST00000452143 C12orf49Q9H741 205 aa9.71□□□□□ -0.86
USP1-204ENST00000452143 TMEM185BQ9H7F4 350 aa9.71□□□□□ -0.86
USP1-204ENST00000452143 TNFRSF12AQ9NP84 129 aa9.71□□□□□ -0.86
USP1-204ENST00000452143 DUSP22Q9NRW4 184 aa9.71□□□□□ -0.86
USP1-204ENST00000452143 OXSMQ9NWU1 459 aa9.71□□□□□ -0.86
USP1-204ENST00000452143 GIN1Q9NXP7 522 aa9.71□□□□□ -0.86
USP1-204ENST00000452143 KLHL13Q9P2N7 655 aa9.71□□□□□ -0.86
USP1-204ENST00000452143 TBK1Q9UHD2 729 aa9.71□□□□□ -0.86
USP1-204ENST00000452143 OVOL3O00110 214 aa9.7□□□□□ -0.86
USP1-204ENST00000452143 GCM2O75603 506 aaPredicted RBP9.7□□□□□ -0.86
USP1-204ENST00000452143 CHEK2O96017 543 aa9.7□□□□□ -0.86
USP1-204ENST00000452143 PLAUP00749 431 aa9.7□□□□□ -0.86
USP1-204ENST00000452143 IL32P24001 234 aa9.7□□□□□ -0.86
USP1-204ENST00000452143 ASMTP46597 345 aa9.7□□□□□ -0.86
USP1-204ENST00000452143 CCT5P48643 541 aa9.7□□□□□ -0.86
USP1-204ENST00000452143 CARD18P57730 90 aa9.7□□□□□ -0.86
USP1-204ENST00000452143 POU6F2P78424 691 aaPredicted RBP9.7□□□□□ -0.86
USP1-204ENST00000452143 KRTAP1-1Q07627 177 aa9.7□□□□□ -0.86
USP1-204ENST00000452143 DMTNQ08495 405 aa9.7□□□□□ -0.86
USP1-204ENST00000452143 FOXF1Q12946 379 aa9.7□□□□□ -0.86
USP1-204ENST00000452143 CAPRIN1Q14444 709 aaKnown RBP9.7□□□□□ -0.86
USP1-204ENST00000452143 P2RY6Q15077 328 aa9.7□□□□□ -0.86
USP1-204ENST00000452143 CD226Q15762 336 aa9.7□□□□□ -0.86
USP1-204ENST00000452143 ZNF385BQ569K4 471 aa9.7□□□□□ -0.86
USP1-204ENST00000452143 LIPMQ5VYY2 423 aa9.7□□□□□ -0.86
USP1-204ENST00000452143 CLEC6AQ6EIG7 209 aa9.7□□□□□ -0.86
USP1-204ENST00000452143 CXXC5Q7LFL8 322 aaKnown RBP9.7□□□□□ -0.86
USP1-204ENST00000452143 R3HCC1LQ7Z5L2 792 aaKnown RBP9.7□□□□□ -0.86
USP1-204ENST00000452143 ZAR1Q86SH2 424 aa9.7□□□□□ -0.86
USP1-204ENST00000452143 TDRPQ86YL5 185 aa9.7□□□□□ -0.86
USP1-204ENST00000452143 ZNF527Q8NB42 609 aa9.7□□□□□ -0.86
USP1-204ENST00000452143 POC1BQ8TC44 478 aa9.7□□□□□ -0.86
USP1-204ENST00000452143 ABHD3Q8WU67 409 aa9.7□□□□□ -0.86
USP1-204ENST00000452143 JADE3Q92613 823 aa9.7□□□□□ -0.86
USP1-204ENST00000452143 OSTF1Q92882 214 aa9.7□□□□□ -0.86
USP1-204ENST00000452143 TSSK3Q96PN8 268 aa9.7□□□□□ -0.86
USP1-204ENST00000452143 MDFIQ99750 246 aa9.7□□□□□ -0.86
USP1-204ENST00000452143 TRMOQ9BU70 441 aa9.7□□□□□ -0.86
USP1-204ENST00000452143 BTBD2Q9BX70 525 aa9.7□□□□□ -0.86
USP1-204ENST00000452143 TXLNGYQ9BZA5 131 aa9.7□□□□□ -0.86
USP1-204ENST00000452143 PPCSQ9HAB8 311 aa9.7□□□□□ -0.86
USP1-204ENST00000452143 ZCCHC3Q9NUD5 404 aaKnown RBP9.7□□□□□ -0.86
USP1-204ENST00000452143 SH3BP4Q9P0V3 963 aa9.7□□□□□ -0.86
USP1-204ENST00000452143 MID2Q9UJV3 735 aa9.7□□□□□ -0.86
USP1-204ENST00000452143 ADAM21Q9UKJ8 722 aa9.7□□□□□ -0.86
USP1-204ENST00000452143 LAMP3Q9UQV4 416 aa9.7□□□□□ -0.86
USP1-204ENST00000452143 ACTL7BQ9Y614 415 aa9.7□□□□□ -0.86
USP1-204ENST00000452143 GPC6Q9Y625 555 aaPredicted RBP9.7□□□□□ -0.86
USP1-204ENST00000452143 TMEM114B3SHH9 223 aa9.69□□□□□ -0.86
USP1-204ENST00000452143 H3BNH8 94 aa9.69□□□□□ -0.86
USP1-204ENST00000452143 AZIN1O14977 448 aa9.69□□□□□ -0.86
USP1-204ENST00000452143 LSM1O15116 133 aaKnown RBP9.69□□□□□ -0.86
USP1-204ENST00000452143 CUBNO60494 3623 aa9.69□□□□□ -0.86
USP1-204ENST00000452143 CRLF1O75462 422 aa9.69□□□□□ -0.86
USP1-204ENST00000452143 OPN1LWP04000 364 aa9.69□□□□□ -0.86
USP1-204ENST00000452143 CD3EP07766 207 aa9.69□□□□□ -0.86
USP1-204ENST00000452143 DANCRP0C864 163 aa9.69□□□□□ -0.86
USP1-204ENST00000452143 CPA3P15088 417 aa9.69□□□□□ -0.86
USP1-204ENST00000452143 ATP6V1C1P21283 382 aa9.69□□□□□ -0.86
USP1-204ENST00000452143 CRHR1P34998 444 aa9.69□□□□□ -0.86
USP1-204ENST00000452143 HPCAL1P37235 193 aa9.69□□□□□ -0.86
USP1-204ENST00000452143 RPL3P39023 403 aaKnown RBP9.69□□□□□ -0.86
USP1-204ENST00000452143 RPL38P63173 70 aaKnown RBP9.69□□□□□ -0.86
USP1-204ENST00000452143 ZNF117Q03924 483 aa9.69□□□□□ -0.86
USP1-204ENST00000452143 TNK1Q13470 666 aa9.69□□□□□ -0.86
USP1-204ENST00000452143 VEZF1Q14119 521 aa9.69□□□□□ -0.86
USP1-204ENST00000452143 CLEC12BQ2HXU8 276 aa9.69□□□□□ -0.86
USP1-204ENST00000452143 RFTN2Q52LD8 501 aaPredicted RBP9.69□□□□□ -0.86
USP1-204ENST00000452143 NCMAPQ5T1S8 102 aa9.69□□□□□ -0.86
USP1-204ENST00000452143 SFRP5Q5T4F7 317 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms