RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 LRRC23Q53EV4 343 aaPredicted RBP11.89□□□□□ -0.51
VPS33A-202ENST00000451053 OR5M10Q6IEU7 315 aa11.89□□□□□ -0.51
VPS33A-202ENST00000451053 SPPL2CQ8IUH8 684 aa11.89□□□□□ -0.51
VPS33A-202ENST00000451053 WDSUB1Q8N9V3 476 aa11.89□□□□□ -0.51
VPS33A-202ENST00000451053 ZNF527Q8NB42 609 aa11.89□□□□□ -0.51
VPS33A-202ENST00000451053 SLC26A7Q8TE54 656 aa11.89□□□□□ -0.51
VPS33A-202ENST00000451053 LZICQ8WZA0 190 aa11.89□□□□□ -0.51
VPS33A-202ENST00000451053 SNRNP40Q96DI7 357 aaKnown RBP11.89□□□□□ -0.51
VPS33A-202ENST00000451053 UGT2B28Q9BY64 529 aa11.89□□□□□ -0.51
VPS33A-202ENST00000451053 ZFP64Q9NPA5 681 aa11.89□□□□□ -0.51
VPS33A-202ENST00000451053 OLAHQ9NV23 265 aa11.89□□□□□ -0.51
VPS33A-202ENST00000451053 BOKQ9UMX3 212 aaPredicted RBP11.89□□□□□ -0.51
VPS33A-202ENST00000451053 DTNAQ9Y4J8 743 aa11.89□□□□□ -0.51
VPS33A-202ENST00000451053 ATRXP46100 2492 aa11.89□□□□□ -0.51
VPS33A-202ENST00000451053 PIEZO2Q9H5I5 2752 aa11.88□□□□□ -0.51
VPS33A-202ENST00000451053 TCRBV3S1A0A5B6 114 aa11.88□□□□□ -0.51
VPS33A-202ENST00000451053 SERINC4A6NH21 518 aa11.88□□□□□ -0.51
VPS33A-202ENST00000451053 AGAP5A6NIR3 686 aa11.88□□□□□ -0.51
VPS33A-202ENST00000451053 OIP5O43482 229 aa11.88□□□□□ -0.51
VPS33A-202ENST00000451053 NDUFB5O43674 189 aa11.88□□□□□ -0.51
VPS33A-202ENST00000451053 ENTPD5O75356 428 aa11.88□□□□□ -0.51
VPS33A-202ENST00000451053 WISP2O76076 250 aa11.88□□□□□ -0.51
VPS33A-202ENST00000451053 PGM3O95394 542 aa11.88□□□□□ -0.51
VPS33A-202ENST00000451053 SERPINA1P01009 418 aa11.88□□□□□ -0.51
VPS33A-202ENST00000451053 ZNF24P17028 368 aa11.88□□□□□ -0.51
VPS33A-202ENST00000451053 RPS4Y1P22090 263 aaKnown RBP11.88□□□□□ -0.51
VPS33A-202ENST00000451053 AQP1P29972 269 aa11.88□□□□□ -0.51
VPS33A-202ENST00000451053 MLLT10P55197 1068 aa11.88□□□□□ -0.51
VPS33A-202ENST00000451053 PPIAP62937 165 aaKnown RBP11.88□□□□□ -0.51
VPS33A-202ENST00000451053 NDUFAF6Q330K2 333 aa11.88□□□□□ -0.51
VPS33A-202ENST00000451053 TIGD3Q6B0B8 471 aa11.88□□□□□ -0.51
VPS33A-202ENST00000451053 AAGABQ6PD74 315 aa11.88□□□□□ -0.51
VPS33A-202ENST00000451053 FAM180AQ6UWF9 173 aa11.88□□□□□ -0.51
VPS33A-202ENST00000451053 ZNF843Q8N446 348 aa11.88□□□□□ -0.51
VPS33A-202ENST00000451053 OR1J4Q8NGS1 313 aa11.88□□□□□ -0.51
VPS33A-202ENST00000451053 PHOSPHO1Q8TCT1 267 aa11.88□□□□□ -0.51
VPS33A-202ENST00000451053 DUSP19Q8WTR2 217 aa11.88□□□□□ -0.51
VPS33A-202ENST00000451053 OIT3Q8WWZ8 545 aa11.88□□□□□ -0.51
VPS33A-202ENST00000451053 TSPAN10Q9H1Z9 355 aaPredicted RBP11.88□□□□□ -0.51
VPS33A-202ENST00000451053 ZNF703Q9H7S9 590 aaPredicted RBP11.88□□□□□ -0.51
VPS33A-202ENST00000451053 MTHFD2LQ9H903 347 aaPredicted RBP11.88□□□□□ -0.51
VPS33A-202ENST00000451053 DCAF13Q9NV06 445 aaKnown RBP11.88□□□□□ -0.51
VPS33A-202ENST00000451053 ASF1BQ9NVP2 202 aa11.88□□□□□ -0.51
VPS33A-202ENST00000451053 PPP4R1LQ9P1A2 415 aa11.88□□□□□ -0.51
VPS33A-202ENST00000451053 FBXL2Q9UKC9 423 aa11.88□□□□□ -0.51
VPS33A-202ENST00000451053 NBEAQ8NFP9 2946 aa11.87□□□□□ -0.51
VPS33A-202ENST00000451053 TCRBV5S2A0A599 114 aa11.87□□□□□ -0.51
VPS33A-202ENST00000451053 DHRS12A0PJE2 317 aa11.87□□□□□ -0.51
VPS33A-202ENST00000451053 CLDN24A6NM45 220 aa11.87□□□□□ -0.51
VPS33A-202ENST00000451053 SUV39H1O43463 412 aa11.87□□□□□ -0.51
VPS33A-202ENST00000451053 GMFGO60234 142 aa11.87□□□□□ -0.51
VPS33A-202ENST00000451053 BCAS1O75363 584 aaPredicted RBP11.87□□□□□ -0.51
VPS33A-202ENST00000451053 GCM2O75603 506 aaPredicted RBP11.87□□□□□ -0.51
VPS33A-202ENST00000451053 ZNF682O95780 498 aa11.87□□□□□ -0.51
VPS33A-202ENST00000451053 CRYABP02511 175 aaKnown RBP11.87□□□□□ -0.51
VPS33A-202ENST00000451053 CELA3AP09093 270 aa11.87□□□□□ -0.51
VPS33A-202ENST00000451053 MST1P26927 711 aa11.87□□□□□ -0.51
VPS33A-202ENST00000451053 MAGEA5P43359 124 aa11.87□□□□□ -0.51
VPS33A-202ENST00000451053 ALDH6A1Q02252 535 aaKnown RBP11.87□□□□□ -0.51
VPS33A-202ENST00000451053 PLAURQ03405 335 aa11.87□□□□□ -0.51
VPS33A-202ENST00000451053 ZNF117Q03924 483 aa11.87□□□□□ -0.51
VPS33A-202ENST00000451053 RIPK1Q13546 671 aa11.87□□□□□ -0.51
VPS33A-202ENST00000451053 FGFBP1Q14512 234 aa11.87□□□□□ -0.51
VPS33A-202ENST00000451053 HYAL4Q2M3T9 481 aa11.87□□□□□ -0.51
VPS33A-202ENST00000451053 FAM98BQ52LJ0 330 aaKnown RBP11.87□□□□□ -0.51
VPS33A-202ENST00000451053 CYBRD1Q53TN4 286 aa11.87□□□□□ -0.51
VPS33A-202ENST00000451053 ZNF324BQ6AW86 544 aaPredicted RBP11.87□□□□□ -0.51
VPS33A-202ENST00000451053 EIF3MQ7L2H7 374 aaKnown RBP11.87□□□□□ -0.51
VPS33A-202ENST00000451053 VRK2Q86Y07 508 aa11.87□□□□□ -0.51
VPS33A-202ENST00000451053 PLCZ1Q86YW0 608 aa11.87□□□□□ -0.51
VPS33A-202ENST00000451053 SIAH3Q8IW03 269 aa11.87□□□□□ -0.51
VPS33A-202ENST00000451053 PEX5LQ8IYB4 626 aa11.87□□□□□ -0.51
VPS33A-202ENST00000451053 TMEM251Q8N6I4 163 aa11.87□□□□□ -0.51
VPS33A-202ENST00000451053 OR52P1PQ8NH57 321 aa11.87□□□□□ -0.51
VPS33A-202ENST00000451053 DUS3LQ96G46 650 aaKnown RBP11.87□□□□□ -0.51
VPS33A-202ENST00000451053 SH3YL1Q96HL8 342 aaPredicted RBP11.87□□□□□ -0.51
VPS33A-202ENST00000451053 GNRHR2Q96P88 292 aa11.87□□□□□ -0.51
VPS33A-202ENST00000451053 KLHDC3Q9BQ90 382 aa11.87□□□□□ -0.51
VPS33A-202ENST00000451053 RSPO3Q9BXY4 272 aaPredicted RBP11.87□□□□□ -0.51
VPS33A-202ENST00000451053 DSN1Q9H410 356 aa11.87□□□□□ -0.51
VPS33A-202ENST00000451053 MAGIXQ9H6Y5 334 aa11.87□□□□□ -0.51
VPS33A-202ENST00000451053 YY1AP1Q9H869 796 aa11.87□□□□□ -0.51
VPS33A-202ENST00000451053 SDHAF3Q9NRP4 125 aa11.87□□□□□ -0.51
VPS33A-202ENST00000451053 MED11Q9P086 117 aa11.87□□□□□ -0.51
VPS33A-202ENST00000451053 SEC14L3Q9UDX4 400 aa11.87□□□□□ -0.51
VPS33A-202ENST00000451053 C15orf41Q9Y2V0 281 aa11.87□□□□□ -0.51
VPS33A-202ENST00000451053 NINQ8N4C6 2090 aa11.87□□□□□ -0.51
VPS33A-202ENST00000451053 NCKAP5O14513 1909 aa11.86□□□□□ -0.51
VPS33A-202ENST00000451053 IGLV3-32A0A0A0MS00 114 aa11.86□□□□□ -0.51
VPS33A-202ENST00000451053 EIF4E1BA6NMX2 242 aaKnown RBP11.86□□□□□ -0.51
VPS33A-202ENST00000451053 B8ZZF3 427 aa11.86□□□□□ -0.51
VPS33A-202ENST00000451053 M0QX08 132 aa11.86□□□□□ -0.51
VPS33A-202ENST00000451053 ACOT7O00154 380 aa11.86□□□□□ -0.51
VPS33A-202ENST00000451053 TFECO14948 347 aaPredicted RBP11.86□□□□□ -0.51
VPS33A-202ENST00000451053 MGRN1O60291 552 aa11.86□□□□□ -0.51
VPS33A-202ENST00000451053 CSTAP01040 98 aa11.86□□□□□ -0.51
VPS33A-202ENST00000451053 DBIP07108 87 aaKnown RBP11.86□□□□□ -0.51
VPS33A-202ENST00000451053 UBL4AP11441 157 aa11.86□□□□□ -0.51
VPS33A-202ENST00000451053 ELAVL4P26378 380 aaKnown RBP11.86□□□□□ -0.51
VPS33A-202ENST00000451053 GDF1P27539 372 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms