RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 CLECL1Q8IZS7 167 aa13.73□□□□□ -0.21
CHD3-205ENST00000449744 OR5D16Q8NGK9 328 aa13.73□□□□□ -0.21
CHD3-205ENST00000449744 OR4A15Q8NGL6 344 aa13.73□□□□□ -0.21
CHD3-205ENST00000449744 OR10D3Q8NH80 312 aa13.73□□□□□ -0.21
CHD3-205ENST00000449744 SLC35G5Q96KT7 338 aa13.73□□□□□ -0.21
CHD3-205ENST00000449744 SLC39A3Q9BRY0 314 aa13.73□□□□□ -0.21
CHD3-205ENST00000449744 NUF2Q9BZD4 464 aa13.73□□□□□ -0.21
CHD3-205ENST00000449744 OPN3Q9H1Y3 402 aaPredicted RBP13.73□□□□□ -0.21
CHD3-205ENST00000449744 LIME1Q9H400 295 aa13.73□□□□□ -0.21
CHD3-205ENST00000449744 CCM2LQ9NUG4 571 aaPredicted RBP13.73□□□□□ -0.21
CHD3-205ENST00000449744 MCTS1Q9ULC4 181 aaKnown RBP13.73□□□□□ -0.21
CHD3-205ENST00000449744 PROCRQ9UNN8 238 aa13.73□□□□□ -0.21
CHD3-205ENST00000449744 AQP8O94778 261 aa13.72□□□□□ -0.21
CHD3-205ENST00000449744 CPSF4O95639 269 aaKnown RBP13.72□□□□□ -0.21
CHD3-205ENST00000449744 OPN1LWP04000 364 aa13.72□□□□□ -0.21
CHD3-205ENST00000449744 POU2F1P14859 743 aa13.72□□□□□ -0.21
CHD3-205ENST00000449744 CD79BP40259 229 aa13.72□□□□□ -0.21
CHD3-205ENST00000449744 EIF1P41567 113 aaKnown RBP13.72□□□□□ -0.21
CHD3-205ENST00000449744 P2RX1P51575 399 aa13.72□□□□□ -0.21
CHD3-205ENST00000449744 RPS26P62854 115 aaKnown RBP13.72□□□□□ -0.21
CHD3-205ENST00000449744 ZNF117Q03924 483 aa13.72□□□□□ -0.21
CHD3-205ENST00000449744 FAM27E3Q08E93 113 aa13.72□□□□□ -0.21
CHD3-205ENST00000449744 BST1Q10588 318 aa13.72□□□□□ -0.21
CHD3-205ENST00000449744 KLHL26Q53HC5 615 aa13.72□□□□□ -0.21
CHD3-205ENST00000449744 ANXA8L1Q5VT79 327 aa13.72□□□□□ -0.21
CHD3-205ENST00000449744 ESPNLQ6ZVH7 1005 aa13.72□□□□□ -0.21
CHD3-205ENST00000449744 LRRC34Q8IZ02 419 aa13.72□□□□□ -0.21
CHD3-205ENST00000449744 OR8J2Q8NGG1 315 aa13.72□□□□□ -0.21
CHD3-205ENST00000449744 NPAS1Q99742 590 aa13.72□□□□□ -0.21
CHD3-205ENST00000449744 TMEM185BQ9H7F4 350 aa13.72□□□□□ -0.21
CHD3-205ENST00000449744 EXD2Q9NVH0 621 aa13.72□□□□□ -0.21
CHD3-205ENST00000449744 PNPOQ9NVS9 261 aa13.72□□□□□ -0.21
CHD3-205ENST00000449744 ELOVL5Q9NYP7 299 aa13.72□□□□□ -0.21
CHD3-205ENST00000449744 HAO1Q9UJM8 370 aa13.72□□□□□ -0.21
CHD3-205ENST00000449744 CARD8Q9Y2G2 431 aa13.72□□□□□ -0.21
CHD3-205ENST00000449744 PLEKHA6Q9Y2H5 1048 aa13.72□□□□□ -0.21
CHD3-205ENST00000449744 EMC9Q9Y3B6 208 aa13.72□□□□□ -0.21
CHD3-205ENST00000449744 DTNAQ9Y4J8 743 aa13.72□□□□□ -0.21
CHD3-205ENST00000449744 SPG11Q96JI7 2443 aa13.72□□□□□ -0.21
CHD3-205ENST00000449744 MPDZO75970 2070 aa13.71□□□□□ -0.21
CHD3-205ENST00000449744 TNFSF11O14788 317 aa13.71□□□□□ -0.21
CHD3-205ENST00000449744 CXCL13O43927 109 aa13.71□□□□□ -0.21
CHD3-205ENST00000449744 ERLIN1O75477 346 aa13.71□□□□□ -0.21
CHD3-205ENST00000449744 AK1P00568 194 aa13.71□□□□□ -0.21
CHD3-205ENST00000449744 CD8BP10966 210 aa13.71□□□□□ -0.21
CHD3-205ENST00000449744 PSMA4P25789 261 aaKnown RBP13.71□□□□□ -0.21
CHD3-205ENST00000449744 PCYT1AP49585 367 aa13.71□□□□□ -0.21
CHD3-205ENST00000449744 RNF144AP50876 292 aaPredicted RBP13.71□□□□□ -0.21
CHD3-205ENST00000449744 CLNS1AP54105 237 aaKnown RBP13.71□□□□□ -0.21
CHD3-205ENST00000449744 SUMO3P55854 103 aaPredicted RBP13.71□□□□□ -0.21
CHD3-205ENST00000449744 CTBP2P56545 445 aa13.71□□□□□ -0.21
CHD3-205ENST00000449744 FOXF1Q12946 379 aa13.71□□□□□ -0.21
CHD3-205ENST00000449744 POU4F3Q15319 338 aa13.71□□□□□ -0.21
CHD3-205ENST00000449744 HBMQ6B0K9 141 aa13.71□□□□□ -0.21
CHD3-205ENST00000449744 ZNF474Q6S9Z5 364 aaPredicted RBP13.71□□□□□ -0.21
CHD3-205ENST00000449744 CBLN3Q6UW01 205 aa13.71□□□□□ -0.21
CHD3-205ENST00000449744 FAM214BQ7L5A3 538 aa13.71□□□□□ -0.21
CHD3-205ENST00000449744 CLEC4FQ8N1N0 589 aa13.71□□□□□ -0.21
CHD3-205ENST00000449744 TMCO5AQ8N6Q1 288 aa13.71□□□□□ -0.21
CHD3-205ENST00000449744 ZNF610Q8N9Z0 462 aa13.71□□□□□ -0.21
CHD3-205ENST00000449744 OR2V1Q8NHB1 315 aa13.71□□□□□ -0.21
CHD3-205ENST00000449744 RFWD2Q8NHY2 731 aa13.71□□□□□ -0.21
CHD3-205ENST00000449744 POC1BQ8TC44 478 aa13.71□□□□□ -0.21
CHD3-205ENST00000449744 KLHL15Q96M94 604 aa13.71□□□□□ -0.21
CHD3-205ENST00000449744 FOXC2Q99958 501 aa13.71□□□□□ -0.21
CHD3-205ENST00000449744 MEAF6Q9HAF1 191 aa13.71□□□□□ -0.21
CHD3-205ENST00000449744 PRSS51A0A1B0GVH4 220 aa13.7□□□□□ -0.22
CHD3-205ENST00000449744 TMEM120BA0PK00 339 aa13.7□□□□□ -0.22
CHD3-205ENST00000449744 GJE1A6NN92 205 aa13.7□□□□□ -0.22
CHD3-205ENST00000449744 ADAMDEC1O15204 470 aa13.7□□□□□ -0.22
CHD3-205ENST00000449744 STX11O75558 287 aa13.7□□□□□ -0.22
CHD3-205ENST00000449744 LINGO3P0C6S8 592 aa13.7□□□□□ -0.22
CHD3-205ENST00000449744 UQCRC2P22695 453 aa13.7□□□□□ -0.22
CHD3-205ENST00000449744 ELK4P28324 431 aa13.7□□□□□ -0.22
CHD3-205ENST00000449744 ADH6P28332 368 aa13.7□□□□□ -0.22
CHD3-205ENST00000449744 SLC6A8P48029 635 aa13.7□□□□□ -0.22
CHD3-205ENST00000449744 CCR4P51679 360 aa13.7□□□□□ -0.22
CHD3-205ENST00000449744 KEAP1Q14145 624 aa13.7□□□□□ -0.22
CHD3-205ENST00000449744 GPR68Q15743 365 aa13.7□□□□□ -0.22
CHD3-205ENST00000449744 DPY19L1Q2PZI1 675 aa13.7□□□□□ -0.22
CHD3-205ENST00000449744 CTU2Q2VPK5 515 aaKnown RBP13.7□□□□□ -0.22
CHD3-205ENST00000449744 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.7□□□□□ -0.22
CHD3-205ENST00000449744 ATAD3BQ5T9A4 648 aa13.7□□□□□ -0.22
CHD3-205ENST00000449744 GTF2IRD2BQ6EKJ0 949 aa13.7□□□□□ -0.22
CHD3-205ENST00000449744 PAMR1Q6UXH9 720 aa13.7□□□□□ -0.22
CHD3-205ENST00000449744 C16orf62Q7Z3J2 963 aa13.7□□□□□ -0.22
CHD3-205ENST00000449744 GTF2IRD2Q86UP8 949 aa13.7□□□□□ -0.22
CHD3-205ENST00000449744 ANKRD46Q86W74 232 aa13.7□□□□□ -0.22
CHD3-205ENST00000449744 LILRA2Q8N149 483 aa13.7□□□□□ -0.22
CHD3-205ENST00000449744 CHDHQ8NE62 594 aaPredicted RBP13.7□□□□□ -0.22
CHD3-205ENST00000449744 TOR1AIP2Q8NFQ8 470 aa13.7□□□□□ -0.22
CHD3-205ENST00000449744 FBXO27Q8NI29 283 aa13.7□□□□□ -0.22
CHD3-205ENST00000449744 MGARPQ8TDB4 240 aa13.7□□□□□ -0.22
CHD3-205ENST00000449744 OSTF1Q92882 214 aa13.7□□□□□ -0.22
CHD3-205ENST00000449744 TESCQ96BS2 214 aa13.7□□□□□ -0.22
CHD3-205ENST00000449744 REXO5Q96IC2 774 aaKnown RBP13.7□□□□□ -0.22
CHD3-205ENST00000449744 GMPPAQ96IJ6 420 aaPredicted RBP13.7□□□□□ -0.22
CHD3-205ENST00000449744 ADGRG7Q96K78 797 aa13.7□□□□□ -0.22
CHD3-205ENST00000449744 SDF2Q99470 211 aa13.7□□□□□ -0.22
CHD3-205ENST00000449744 KLHDC3Q9BQ90 382 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms