RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 CT45A9P0DMV2 189 aa11.04□□□□□ -0.64
AC004540.1-204ENST00000449537 EPORP19235 508 aa11.04□□□□□ -0.64
AC004540.1-204ENST00000449537 GCAP28676 217 aa11.04□□□□□ -0.64
AC004540.1-204ENST00000449537 PIK3CBP42338 1070 aa11.04□□□□□ -0.64
AC004540.1-204ENST00000449537 PSPHP78330 225 aa11.04□□□□□ -0.64
AC004540.1-204ENST00000449537 E2F2Q14209 437 aa11.04□□□□□ -0.64
AC004540.1-204ENST00000449537 CT45A2Q5DJT8 189 aa11.04□□□□□ -0.64
AC004540.1-204ENST00000449537 SULT1C3Q6IMI6 304 aa11.04□□□□□ -0.64
AC004540.1-204ENST00000449537 KLC3Q6P597 504 aa11.04□□□□□ -0.64
AC004540.1-204ENST00000449537 TEX29Q8N6K0 151 aa11.04□□□□□ -0.64
AC004540.1-204ENST00000449537 ZDHHC22Q8N966 263 aa11.04□□□□□ -0.64
AC004540.1-204ENST00000449537 EPS8L3Q8TE67 593 aaKnown RBP11.04□□□□□ -0.64
AC004540.1-204ENST00000449537 EFHD2Q96C19 240 aaPredicted RBP11.04□□□□□ -0.64
AC004540.1-204ENST00000449537 MTERF1Q99551 399 aaKnown RBP11.04□□□□□ -0.64
AC004540.1-204ENST00000449537 GP6Q9HCN6 339 aa11.04□□□□□ -0.64
AC004540.1-204ENST00000449537 DDX28Q9NUL7 540 aaKnown RBP11.04□□□□□ -0.64
AC004540.1-204ENST00000449537 HIF1ANQ9NWT6 349 aa11.04□□□□□ -0.64
AC004540.1-204ENST00000449537 MKS1Q9NXB0 559 aa11.04□□□□□ -0.64
AC004540.1-204ENST00000449537 HMGB1P1B2RPK0 211 aaPredicted RBP11.03□□□□□ -0.64
AC004540.1-204ENST00000449537 TRIM49D1C9J1S8 452 aa11.03□□□□□ -0.64
AC004540.1-204ENST00000449537 M0R1B8 84 aa11.03□□□□□ -0.64
AC004540.1-204ENST00000449537 FADS1O60427 444 aa11.03□□□□□ -0.64
AC004540.1-204ENST00000449537 CCNT2O60583 730 aaKnown RBP11.03□□□□□ -0.64
AC004540.1-204ENST00000449537 PRKD3O94806 890 aa11.03□□□□□ -0.64
AC004540.1-204ENST00000449537 BCL10O95999 233 aa11.03□□□□□ -0.64
AC004540.1-204ENST00000449537 GBAP04062 536 aa11.03□□□□□ -0.64
AC004540.1-204ENST00000449537 ATP1B1P05026 303 aa11.03□□□□□ -0.64
AC004540.1-204ENST00000449537 GSTA1P08263 222 aa11.03□□□□□ -0.64
AC004540.1-204ENST00000449537 TYK2P29597 1187 aa11.03□□□□□ -0.64
AC004540.1-204ENST00000449537 CORO7P57737 925 aa11.03□□□□□ -0.64
AC004540.1-204ENST00000449537 ATP6V0D1P61421 351 aa11.03□□□□□ -0.64
AC004540.1-204ENST00000449537 SNRPD2P62316 118 aaKnown RBP11.03□□□□□ -0.64
AC004540.1-204ENST00000449537 UBA52P62987 128 aaKnown RBP11.03□□□□□ -0.64
AC004540.1-204ENST00000449537 RAC1P63000 192 aa11.03□□□□□ -0.64
AC004540.1-204ENST00000449537 PHC1P78364 1004 aa11.03□□□□□ -0.64
AC004540.1-204ENST00000449537 CHRNEQ04844 493 aa11.03□□□□□ -0.64
AC004540.1-204ENST00000449537 CDKL4Q5MAI5 379 aa11.03□□□□□ -0.64
AC004540.1-204ENST00000449537 MROH9Q5TGP6 573 aa11.03□□□□□ -0.64
AC004540.1-204ENST00000449537 RAPH1Q70E73 1250 aa11.03□□□□□ -0.64
AC004540.1-204ENST00000449537 SLC46A3Q7Z3Q1 461 aa11.03□□□□□ -0.64
AC004540.1-204ENST00000449537 OR52N5Q8NH56 324 aa11.03□□□□□ -0.64
AC004540.1-204ENST00000449537 RNF128Q8TEB7 428 aa11.03□□□□□ -0.64
AC004540.1-204ENST00000449537 TMEM186Q96B77 213 aa11.03□□□□□ -0.64
AC004540.1-204ENST00000449537 DERL2Q9GZP9 239 aa11.03□□□□□ -0.64
AC004540.1-204ENST00000449537 CENPHQ9H3R5 247 aa11.03□□□□□ -0.64
AC004540.1-204ENST00000449537 SSU72Q9NP77 194 aaKnown RBP11.03□□□□□ -0.64
AC004540.1-204ENST00000449537 ESM1Q9NQ30 184 aa11.03□□□□□ -0.64
AC004540.1-204ENST00000449537 PRSS50Q9UI38 385 aa11.03□□□□□ -0.64
AC004540.1-204ENST00000449537 GMFGO60234 142 aa11.02□□□□□ -0.65
AC004540.1-204ENST00000449537 GLRA3O75311 464 aa11.02□□□□□ -0.65
AC004540.1-204ENST00000449537 WISP3O95389 354 aaPredicted RBP11.02□□□□□ -0.65
AC004540.1-204ENST00000449537 IL33O95760 270 aa11.02□□□□□ -0.65
AC004540.1-204ENST00000449537 ZNF17P17021 662 aa11.02□□□□□ -0.65
AC004540.1-204ENST00000449537 CSNK2A2P19784 350 aaPredicted RBP11.02□□□□□ -0.65
AC004540.1-204ENST00000449537 IGHV1-2P23083 117 aa11.02□□□□□ -0.65
AC004540.1-204ENST00000449537 FEN1P39748 380 aaKnown RBP11.02□□□□□ -0.65
AC004540.1-204ENST00000449537 CLK3P49761 638 aaKnown RBP11.02□□□□□ -0.65
AC004540.1-204ENST00000449537 TAS2R39P59534 338 aa11.02□□□□□ -0.65
AC004540.1-204ENST00000449537 DUSP2Q05923 314 aa11.02□□□□□ -0.65
AC004540.1-204ENST00000449537 CCNIQ14094 377 aa11.02□□□□□ -0.65
AC004540.1-204ENST00000449537 MLC1Q15049 377 aa11.02□□□□□ -0.65
AC004540.1-204ENST00000449537 FAM83EQ2M2I3 478 aa11.02□□□□□ -0.65
AC004540.1-204ENST00000449537 AGBL2Q5U5Z8 902 aa11.02□□□□□ -0.65
AC004540.1-204ENST00000449537 NUDT13Q86X67 352 aa11.02□□□□□ -0.65
AC004540.1-204ENST00000449537 ARFGAP2Q8N6H7 521 aa11.02□□□□□ -0.65
AC004540.1-204ENST00000449537 MZB1Q8WU39 189 aa11.02□□□□□ -0.65
AC004540.1-204ENST00000449537 C1QTNF6Q9BXI9 259 aa11.02□□□□□ -0.65
AC004540.1-204ENST00000449537 RTN4RQ9BZR6 473 aa11.02□□□□□ -0.65
AC004540.1-204ENST00000449537 SLITRK2Q9H156 845 aa11.02□□□□□ -0.65
AC004540.1-204ENST00000449537 NMRAL1Q9HBL8 299 aa11.02□□□□□ -0.65
AC004540.1-204ENST00000449537 TIGARQ9NQ88 270 aa11.02□□□□□ -0.65
AC004540.1-204ENST00000449537 MID2Q9UJV3 735 aa11.02□□□□□ -0.65
AC004540.1-204ENST00000449537 ABCG2Q9UNQ0 655 aa11.02□□□□□ -0.65
AC004540.1-204ENST00000449537 VDAC3Q9Y277 283 aa11.02□□□□□ -0.65
AC004540.1-204ENST00000449537 MTO1Q9Y2Z2 717 aaKnown RBP11.02□□□□□ -0.65
AC004540.1-204ENST00000449537 ACOT9Q9Y305 439 aa11.02□□□□□ -0.65
AC004540.1-204ENST00000449537 PCDHB14Q9Y5E9 798 aa11.02□□□□□ -0.65
AC004540.1-204ENST00000449537 A0A096LPK6 155 aa11.01□□□□□ -0.65
AC004540.1-204ENST00000449537 HMX2A2RU54 273 aa11.01□□□□□ -0.65
AC004540.1-204ENST00000449537 SMIM23A6NLE4 172 aa11.01□□□□□ -0.65
AC004540.1-204ENST00000449537 CCT8L1PA6NM43 557 aa11.01□□□□□ -0.65
AC004540.1-204ENST00000449537 ERAL1O75616 437 aaKnown RBP11.01□□□□□ -0.65
AC004540.1-204ENST00000449537 BCAS2O75934 225 aaPredicted RBP11.01□□□□□ -0.65
AC004540.1-204ENST00000449537 LTA4HP09960 611 aaKnown RBP11.01□□□□□ -0.65
AC004540.1-204ENST00000449537 DAOP14920 347 aa11.01□□□□□ -0.65
AC004540.1-204ENST00000449537 PCSK2P16519 638 aa11.01□□□□□ -0.65
AC004540.1-204ENST00000449537 ME2P23368 584 aa11.01□□□□□ -0.65
AC004540.1-204ENST00000449537 OR3A2P47893 321 aa11.01□□□□□ -0.65
AC004540.1-204ENST00000449537 CUL3Q13618 768 aa11.01□□□□□ -0.65
AC004540.1-204ENST00000449537 TNFAIP8L3Q5GJ75 292 aa11.01□□□□□ -0.65
AC004540.1-204ENST00000449537 ARL13AQ5H913 290 aaPredicted RBP11.01□□□□□ -0.65
AC004540.1-204ENST00000449537 TCHHL1Q5QJ38 904 aaPredicted RBP11.01□□□□□ -0.65
AC004540.1-204ENST00000449537 FAHD2BQ6P2I3 314 aaPredicted RBP11.01□□□□□ -0.65
AC004540.1-204ENST00000449537 MARCH3Q86UD3 253 aa11.01□□□□□ -0.65
AC004540.1-204ENST00000449537 TRABD2AQ86V40 505 aa11.01□□□□□ -0.65
AC004540.1-204ENST00000449537 SLC44A2Q8IWA5 706 aaPredicted RBP11.01□□□□□ -0.65
AC004540.1-204ENST00000449537 ZNF433Q8N7K0 673 aaPredicted RBP11.01□□□□□ -0.65
AC004540.1-204ENST00000449537 OR4N2Q8NGD1 307 aa11.01□□□□□ -0.65
AC004540.1-204ENST00000449537 FAM76AQ8TAV0 307 aa11.01□□□□□ -0.65
AC004540.1-204ENST00000449537 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms